Q96RT6
Gene name |
CTAGE1 (CTAGE2) |
Protein name |
cTAGE family member 2 |
Names |
Protein cTAGE-2, Cancer/testis antigen 21.2, CT21.2 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:64693 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q96RT6
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q96RT6-F1 | Predicted | AlphaFoldDB |
777 variants for Q96RT6
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1287948190 CA401770479 |
2 | R>K | No |
ClinGen gnomAD |
|
|
rs921288850 CA297015481 |
3 | P>A | No |
TOPMed ClinGen |
|
|
rs1454857592 CA401770471 |
3 | P>H | No |
TOPMed ClinGen |
|
|
CA401770468 COSM1387987 COSM1387986 rs1333081479 |
4 | D>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
gnomAD ClinGen cosmic curated NCI-TCGA |
|
CA8909630 rs201319761 |
5 | S>P | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA401770461 rs201319761 |
5 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369370325 CA8909629 |
7 | P>L | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
|
rs1405187477 CA401770446 |
7 | P>S | No |
ClinGen TOPMed |
|
|
CA8909628 rs777902513 |
8 | Y>C | No |
ExAC gnomAD ClinGen |
|
|
CA401770418 rs1347748113 |
11 | P>Q | No |
TOPMed ClinGen |
|
|
rs1226980676 CA401770412 |
12 | W>S | No |
TOPMed ClinGen |
|
|
rs772138960 CA8909627 |
13 | E>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 13 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401770384 rs571458052 |
16 | I>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs912356663 CA297015400 |
16 | I>M | No |
ClinGen TOPMed |
|
|
CA8909626 rs571458052 |
16 | I>T | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
rs779323685 CA8909625 |
17 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8909624 rs755487694 |
17 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
| TCGA novel | 18 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 18 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1488236025 CA401770372 |
19 | A>T | No |
ClinGen TOPMed |
|
|
CA8909622 rs373450822 |
21 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401770360 rs373450822 |
21 | A>T | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
|
rs1465749822 CA401770356 |
21 | A>V | No |
gnomAD ClinGen |
|
|
CA8909621 rs756476268 |
22 | G>V | No |
ExAC gnomAD ClinGen |
|
|
CA401770345 rs1206929023 |
23 | F>Y | No |
gnomAD ClinGen |
|
|
rs1347370738 CA401770338 |
24 | F>S | No |
ClinGen gnomAD |
|
|
CA8909620 rs750068905 |
26 | V>F | No |
ClinGen ExAC gnomAD |
|
|
COSM986995 rs200261135 CA297015347 COSM986996 |
28 | F>L | endometrium [Cosmic] | No |
1000Genomes gnomAD ClinGen cosmic curated |
|
CA297015342 rs201220736 |
28 | F>S | No |
1000Genomes ClinGen |
|
|
CA401770297 rs1181229424 |
30 | W>C | No |
ClinGen TOPMed |
|
|
rs767099679 CA8909619 |
30 | W>R | No |
ClinGen ExAC TOPMed |
|
|
CA401770288 rs1299565132 |
32 | S>R | No |
gnomAD ClinGen |
|
|
CA8909618 rs761349056 |
32 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA401770270 rs1364408227 |
34 | R>K | No |
TOPMed gnomAD ClinGen |
|
|
rs368879841 CA297015335 |
35 | S>L | No |
ESP ClinGen |
|
|
CA8909617 rs751121636 |
35 | S>T | No |
ExAC gnomAD ClinGen |
|
|
rs551245351 CA297015326 |
36 | V>D | No |
ClinGen 1000Genomes |
|
|
rs762974650 CA8909615 |
37 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8909616 rs762974650 |
37 | T>R | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA401770252 rs1252713371 |
38 | S>C | No |
gnomAD ClinGen |
|
|
rs1194177055 CA401770243 |
39 | R>L | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 39 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs374840189 CA8909613 |
39 | R>W | No |
ESP ExAC gnomAD ClinGen |
|
|
CA297015293 rs995686138 |
41 | Y>C | No |
TOPMed ClinGen |
|
|
rs759269246 CA8909612 |
41 | Y>H | No |
ExAC gnomAD ClinGen |
|
|
CA401770236 rs759269246 |
41 | Y>N | No |
ClinGen ExAC gnomAD |
|
|
rs1170910996 CA401770205 |
45 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA297015268 rs757348631 |
45 | E>Q | No |
Ensembl ClinGen |
|
|
rs1444267322 CA401770186 |
48 | F>L | No |
ClinGen gnomAD |
|
| TCGA novel | 49 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8909608 rs778949279 |
52 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8909607 rs368675297 |
54 | G>E | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA401770144 rs749765092 |
55 | L>V | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs1341341161 CA401770126 |
57 | E>D | No |
gnomAD ClinGen |
|
|
CA401770133 rs1228890010 |
57 | E>K | No |
gnomAD ClinGen |
|
|
rs756453443 CA8909604 |
58 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1358792254 CA401770125 |
58 | E>K | No |
TOPMed ClinGen |
|
|
CA8909603 rs750787091 |
60 | C>G | No |
ExAC gnomAD ClinGen |
|
|
CA297015208 rs1034466238 |
60 | C>Y | No |
TOPMed ClinGen |
|
|
CA297015198 rs376319377 |
62 | L>I | No |
ESP TOPMed gnomAD ClinGen |
|
|
rs780833872 CA8909602 |
63 | L>F | No |
ExAC gnomAD ClinGen |
|
|
CA401770092 rs780833872 |
63 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs756876468 CA8909600 |
66 | F>L | No |
ExAC gnomAD ClinGen |
|
|
CA297015151 rs906788779 |
67 | S>R | No |
TOPMed ClinGen |
|
|
CA401770053 rs1481534146 |
68 | L>P | No |
TOPMed ClinGen |
|
|
rs1338923111 CA401770051 |
69 | V>I | No |
gnomAD ClinGen |
|
|
rs1568128563 CA401770043 |
70 | Q>* | No |
Ensembl ClinGen |
|
|
CA401770040 rs1598491447 |
70 | Q>H | No |
ClinGen Ensembl |
|
|
CA8909599 rs751319523 |
70 | Q>P | No |
ExAC gnomAD ClinGen |
|
|
rs1430847047 CA401770037 |
71 | K>E | No |
ClinGen gnomAD |
|
| TCGA novel | 71 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1390100412 CA401770027 |
72 | E>G | No |
gnomAD ClinGen |
|
|
rs763697632 CA8909598 |
73 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs752629888 CA8909596 |
75 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1186966305 CA401770007 |
75 | G>S | No |
gnomAD ClinGen |
|
|
CA297015131 rs752663928 |
76 | Y>C | No |
ClinGen Ensembl |
|
|
rs1009752323 CA297015117 |
78 | V>I | No |
ClinGen TOPMed |
|
|
CA8909595 rs765115661 |
80 | S>L | No |
ExAC gnomAD ClinGen |
|
|
rs759305878 CA8909594 |
81 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs1482644005 CA401769959 |
82 | L>F | No |
ClinGen gnomAD |
|
|
rs1236854062 CA401769961 |
82 | L>S | No |
ClinGen TOPMed gnomAD |
|
|
CA8909593 rs765099199 |
83 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 83 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8909592 rs765099199 |
83 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401769950 rs1229903109 |
84 | N>D | No |
gnomAD ClinGen |
|
|
rs199824409 CA401769945 CA8909591 |
84 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs774596328 CA8909590 |
87 | F>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 88 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8909589 rs768701296 |
88 | E>G | No |
ExAC gnomAD ClinGen |
|
|
CA297015050 rs749393418 |
89 | K>N | No |
ClinGen ExAC |
|
|
CA8909586 rs770209006 |
91 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs770209006 CA401769901 |
91 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs549778338 CA8909585 |
94 | A>V | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
rs1370279037 CA401769867 |
96 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA8909584 rs530065234 |
96 | S>R | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
rs560943805 CA8909583 |
98 | E>D | No |
1000Genomes ExAC gnomAD ClinGen |
|
|
rs1301573638 CA401769848 |
99 | A>T | No |
ClinGen TOPMed |
|
|
rs1392105203 CA401769841 |
100 | T>A | No |
ClinGen gnomAD |
|
|
CA8909581 rs777586059 |
100 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1392105203 CA401769840 |
100 | T>S | No |
ClinGen gnomAD |
|
|
CA8909582 rs777586059 |
100 | T>S | No |
ExAC TOPMed gnomAD ClinGen |
|
|
COSM986994 CA8909580 rs541555782 COSM229316 |
102 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium skin [NCI-TCGA, Cosmic] | No |
1000Genomes ExAC gnomAD ClinGen cosmic curated NCI-TCGA |
|
rs752288748 CA8909579 |
103 | K>R | No |
ExAC gnomAD ClinGen |
|
|
CA401769810 rs1472394697 |
105 | N>D | No |
ClinGen gnomAD |
|
|
rs1598491378 CA401769795 |
107 | F>L | No |
Ensembl ClinGen |
|
|
rs1453409011 CA401769790 |
107 | F>L | No |
ClinGen TOPMed |
|
|
rs1317273985 CA401769785 |
108 | N>I | No |
ClinGen TOPMed |
|
|
rs374980447 CA8909578 |
111 | L>F | No |
ESP ExAC gnomAD ClinGen |
|
|
rs374980447 CA8909577 |
111 | L>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ESP ExAC gnomAD ClinGen NCI-TCGA |
|
rs753854448 CA8909576 |
112 | V>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA297014990 rs892656855 |
113 | H>R | No |
TOPMed gnomAD ClinGen |
|
| TCGA novel | 114 | E>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs370060769 CA8909575 |
115 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1461720702 CA401769734 |
116 | L>F | No |
TOPMed ClinGen |
|
|
rs377019906 CA8909574 |
116 | L>P | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
| TCGA novel | 117 | C>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1568128392 CA401769728 |
117 | C>Y | No |
ClinGen Ensembl |
|
|
CA401769718 rs1245659399 |
119 | E>K | No |
TOPMed ClinGen |
|
|
rs572409609 CA8909573 |
121 | E>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8909572 rs764302951 |
123 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
CA401769675 rs1350941246 |
124 | E>D | No |
ClinGen gnomAD |
|
|
rs762977905 CA8909571 |
125 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA401769658 rs1186720924 |
127 | S>T | No |
TOPMed ClinGen |
|
| TCGA novel | 127 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs775452227 CA8909570 |
128 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1369468574 CA401769638 |
129 | H>Q | No |
gnomAD ClinGen |
|
|
CA8909569 rs769962250 |
130 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746325500 CA8909567 |
131 | E>V | No |
ClinGen ExAC |
|
|
rs777257609 CA8909566 |
132 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA8909565 rs771368746 |
132 | Q>R | No |
ExAC gnomAD ClinGen |
|
|
rs747386412 CA8909564 |
133 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs372035129 CA8909561 |
137 | A>E | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA8909562 rs758148831 |
137 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs372035129 CA297014914 |
137 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ESP ExAC TOPMed gnomAD ClinGen NCI-TCGA |
|
rs368621519 CA297014889 |
138 | D>G | No |
ESP ClinGen |
|
|
rs1393006674 CA401769585 |
138 | D>H | No |
ClinGen gnomAD |
|
|
CA297014883 rs1040111743 |
139 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs200063482 CA8909556 |
145 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8909557 rs200063482 |
145 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8909554 rs764249523 |
146 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1303146237 CA401769516 |
148 | D>G | No |
gnomAD ClinGen |
|
|
rs1368813668 CA401769520 |
148 | D>N | No |
gnomAD ClinGen |
|
|
rs763137438 CA8909553 |
149 | E>A | No |
ExAC gnomAD ClinGen |
|
|
CA8909552 rs192593442 |
149 | E>D | No |
ClinGen 1000Genomes ExAC |
|
|
rs763137438 CA401769509 |
149 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1439256989 CA401769511 |
149 | E>K | No |
gnomAD ClinGen |
|
|
CA401769501 rs1321275621 |
150 | S>L | No |
TOPMed gnomAD ClinGen |
|
|
CA8909551 rs370800391 |
153 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8909550 rs759679661 |
154 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs776939884 CA8909549 |
155 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
|
CA297014814 rs372815739 |
157 | V>I | No |
ClinGen TOPMed |
|
|
CA401769460 rs372815739 |
157 | V>L | No |
TOPMed ClinGen |
|
|
CA8909548 rs771599949 |
158 | A>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs761074489 CA8909547 |
160 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA401769433 rs1248616367 |
161 | K>N | No |
gnomAD ClinGen |
|
|
CA8909546 rs545245742 |
161 | K>R | No |
ClinGen 1000Genomes ExAC |
|
|
CA401769407 rs1187348207 |
165 | K>Q | No |
gnomAD ClinGen |
|
|
CA8909545 rs772606152 |
166 | R>S | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA297014790 rs369669896 |
167 | F>L | No |
ClinGen ESP TOPMed |
|
|
CA401769378 rs1238829135 |
169 | A>T | No |
ClinGen gnomAD |
|
|
CA8909544 rs576826595 |
169 | A>V | No |
1000Genomes ExAC gnomAD ClinGen |
|
|
CA8909542 CA401769368 rs767993073 |
170 | N>K | No |
ExAC gnomAD ClinGen |
|
|
COSM1202551 COSM1202550 rs372127240 CA8909541 |
173 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ESP ExAC TOPMed gnomAD ClinGen cosmic curated NCI-TCGA |
|
CA8909540 rs779924699 |
174 | L>V | No |
ExAC gnomAD ClinGen |
|
|
rs1381709269 CA401769340 |
175 | E>Q | No |
gnomAD ClinGen |
|
|
rs756065950 CA8909539 |
176 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750407061 CA8909538 |
176 | I>T | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs187253390 CA8909536 |
177 | E>K | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
rs187253390 CA8909537 |
177 | E>Q | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
| TCGA novel | 178 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401769307 rs1347128550 |
180 | D>Y | No |
ClinGen TOPMed |
|
|
CA8909534 rs573723721 |
181 | A>V | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
CA297014707 rs563242342 |
182 | W>C | No |
Ensembl ClinGen |
|
|
CA297014710 rs919791239 |
182 | W>R | No |
ClinGen TOPMed |
|
|
CA401769285 rs1390703318 |
183 | K>* | No |
ClinGen TOPMed gnomAD |
|
|
CA401769286 rs1390703318 |
183 | K>E | No |
TOPMed gnomAD ClinGen |
|
| TCGA novel | 185 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1167944744 CA401769247 |
188 | L>F | No |
ClinGen gnomAD |
|
| TCGA novel | 191 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1426672771 CA401769224 |
191 | S>N | No |
ClinGen gnomAD |
|
|
rs1482695877 CA401769193 |
195 | L>F | No |
ClinGen gnomAD |
|
|
CA8909531 rs766617257 |
195 | L>R | No |
ExAC gnomAD ClinGen |
|
| TCGA novel | 196 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs761235536 CA8909530 |
199 | A>V | No |
ExAC gnomAD ClinGen |
|
|
rs762252148 COSM563071 COSM563070 CA8909527 |
202 | W>R | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ExAC gnomAD ClinGen cosmic curated NCI-TCGA |
|
rs1033983086 CA297014655 |
207 | S>G | No |
TOPMed ClinGen |
|
|
rs1221269192 CA401769108 |
207 | S>N | No |
TOPMed ClinGen |
|
|
rs1306303017 CA401769105 |
207 | S>R | No |
ClinGen gnomAD |
|
| TCGA novel | 208 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 209 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1314887065 CA401769086 |
210 | I>N | No |
gnomAD ClinGen |
|
|
rs1314887065 CA401769085 |
210 | I>T | No |
gnomAD ClinGen |
|
|
rs773807468 CA8909526 |
213 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs768384979 CA8909525 |
214 | R>G | No |
ClinGen ExAC |
|
|
rs553477787 CA8909524 |
215 | T>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA401769044 rs1411409365 |
216 | F>S | No |
ClinGen gnomAD |
|
|
CA8909523 rs779515078 |
218 | D>V | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA8909522 rs769330983 |
219 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs370758105 CA8909521 |
220 | K>E | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
|
rs370758105 CA401769020 |
220 | K>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401769008 rs1474633137 |
221 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
rs771603655 CA8909520 |
222 | H>P | No |
ExAC gnomAD ClinGen |
|
|
rs771603655 CA401769003 |
222 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs1403718834 CA401768995 |
223 | A>V | No |
ClinGen TOPMed |
|
| TCGA novel | 227 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1183824870 CA401768967 |
228 | N>H | No |
gnomAD ClinGen |
|
|
CA401768963 rs1472717925 |
228 | N>S | No |
TOPMed gnomAD ClinGen |
|
|
CA8909518 rs746855683 |
229 | D>A | No |
ExAC gnomAD ClinGen |
|
|
CA401768956 rs746855683 |
229 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA8909519 rs756939737 |
229 | D>Y | No |
ExAC gnomAD ClinGen |
|
|
rs1479933700 CA401768952 |
230 | K>E | No |
ClinGen gnomAD |
|
|
rs200584981 CA8909517 |
230 | K>R | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
CA401768944 rs1222389966 |
231 | E>K | No |
ClinGen gnomAD |
|
|
rs1291523382 CA401768937 |
232 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1568127864 CA401768935 |
232 | N>T | No |
ClinGen Ensembl |
|
|
rs1230389514 CA401768928 |
233 | H>Y | No |
gnomAD ClinGen |
|
|
CA8909516 rs373271841 |
234 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA8909515 rs377384297 |
235 | K>M | No |
ESP ExAC gnomAD ClinGen |
|
| TCGA novel | 235 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs761245420 CA8909514 |
236 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA401768902 rs1294102721 |
237 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1369602730 CA401768903 |
237 | L>V | No |
gnomAD ClinGen |
|
|
rs750902359 CA297014558 |
240 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8909511 rs762042711 |
240 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA8909510 rs762042711 |
240 | R>L | No |
ExAC gnomAD ClinGen |
|
|
CA8909512 rs750902359 |
240 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764412838 CA8909508 |
243 | K>N | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs1598491143 CA401768859 |
244 | M>I | No |
ClinGen Ensembl |
|
|
rs571209098 CA8909507 |
244 | M>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1181502329 CA401768846 |
246 | D>H | No |
TOPMed gnomAD ClinGen |
|
|
rs1181502329 CA401768847 |
246 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1598491136 CA401768831 |
248 | V>D | No |
Ensembl ClinGen |
|
|
rs1194742398 CA401768826 |
249 | A>S | No |
ClinGen gnomAD |
|
|
rs374665588 CA8909505 |
250 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369356584 COSM473675 CA8909506 COSM473676 |
250 | M>V | kidney [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA8909504 rs551576226 |
251 | L>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs372541674 CA8909503 |
251 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401768812 rs372541674 |
251 | L>R | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
|
rs1183127657 CA401768802 |
253 | E>K | No |
ClinGen TOPMed |
|
|
CA8909502 rs770926965 |
254 | D>G | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs1260402128 CA401768795 |
254 | D>N | No |
gnomAD ClinGen |
|
|
rs746971304 CA8909501 |
256 | T>M | No |
ClinGen ExAC gnomAD |
|
|
CA8909499 rs758196293 |
257 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA8909497 rs369727044 |
259 | D>G | No |
ESP ExAC TOPMed ClinGen |
|
|
CA8909498 rs749509447 |
259 | D>Y | No |
ExAC gnomAD ClinGen |
|
|
rs750562790 CA8909495 |
262 | E>G | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA8909493 RCV000961544 rs182517113 |
264 | E>G | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA8909494 rs767860555 |
264 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1467269440 CA401768717 |
265 | M>T | No |
gnomAD ClinGen |
|
|
CA401768699 rs1379663573 |
267 | S>N | No |
ClinGen gnomAD |
|
|
COSM473674 rs764512165 COSM473673 CA8909491 |
269 | S>L | kidney Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA8909489 rs568690109 |
270 | E>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8909490 rs763362856 |
270 | E>K | No |
ExAC gnomAD ClinGen |
|
|
rs878941003 CA297014399 |
271 | D>N | No |
Ensembl ClinGen |
|
|
rs1598491087 CA401768664 |
273 | A>T | No |
Ensembl ClinGen |
|
|
CA401768651 rs1472253935 |
274 | Y>* | No |
ClinGen gnomAD |
|
| TCGA novel | 275 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1418629022 CA401768625 |
278 | P>S | No |
ClinGen gnomAD |
|
|
rs759002167 CA8909486 |
279 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC gnomAD ClinGen NCI-TCGA |
|
rs1190176570 CA401768611 |
280 | K>I | No |
gnomAD ClinGen |
|
|
CA401768603 rs1256322245 |
281 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs201580348 CA8909485 |
282 | A>D | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA401768598 rs201580348 |
282 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 283 | L>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs770390907 CA8909484 |
285 | K>E | No |
ExAC gnomAD ClinGen |
|
| TCGA novel | 285 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1325297651 CA401768571 |
286 | L>R | No |
ClinGen gnomAD |
|
|
CA8909482 rs773083330 |
288 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA401768561 rs1460375878 |
288 | H>Y | No |
ClinGen TOPMed |
|
|
rs376589036 CA297014371 |
289 | A>G | No |
ESP ClinGen |
|
|
CA401768542 rs1397379291 |
291 | K>T | No |
ClinGen gnomAD |
|
|
CA8909480 rs747962802 |
292 | L>V | No |
ExAC gnomAD ClinGen |
|
|
CA8909479 rs780383237 |
294 | A>V | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA401768495 rs1393804649 |
298 | T>P | No |
ClinGen gnomAD |
|
|
CA401768493 rs1170967346 |
298 | T>S | No |
ClinGen gnomAD |
|
| TCGA novel | 300 | E>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs770162854 CA8909478 |
301 | G>R | No |
ExAC gnomAD ClinGen |
|
|
rs746139402 CA8909477 |
303 | R>I | No |
ClinGen ExAC gnomAD |
|
|
RCV000931777 rs190685228 CA8909476 |
305 | Q>E | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA8909475 rs757345410 |
305 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
rs1598491019 CA401768441 |
306 | I>V | No |
Ensembl ClinGen |
|
|
rs774858284 CA8909474 |
311 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8909473 rs778152264 |
312 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8909472 rs758691590 |
313 | V>A | No |
ExAC gnomAD ClinGen |
|
|
rs1196241165 CA401768381 |
314 | D>E | No |
TOPMed gnomAD ClinGen |
|
|
COSM986985 CA8909471 COSM986984 rs753087084 |
315 | K>E | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ExAC gnomAD ClinGen cosmic curated NCI-TCGA |
|
rs1246413777 CA401768371 |
316 | T>I | No |
gnomAD ClinGen |
|
|
CA8909470 rs765643156 |
316 | T>P | No |
ExAC gnomAD ClinGen |
|
| TCGA novel | 317 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs368489121 CA8909469 |
318 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401768351 rs1469219386 |
319 | E>* | No |
TOPMed ClinGen |
|
|
rs1384329317 CA401768348 |
319 | E>V | No |
TOPMed ClinGen |
|
|
CA401768344 rs753503451 |
320 | L>F | No |
ExAC gnomAD ClinGen |
|
|
CA401768342 rs1380078663 |
320 | L>P | No |
TOPMed ClinGen |
|
|
CA8909468 rs753503451 |
320 | L>V | No |
ClinGen ExAC gnomAD |
|
|
COSM986983 CA8909467 COSM986982 rs765901474 |
322 | E>K | endometrium [Cosmic] | No |
ExAC gnomAD ClinGen cosmic curated |
|
rs1228526642 CA401768325 |
323 | H>Y | No |
ClinGen TOPMed |
|
|
rs1166196416 CA401768316 |
324 | I>T | No |
ClinGen gnomAD |
|
|
CA8909464 rs12961009 |
324 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA401768297 rs1418826465 |
327 | L>I | No |
ClinGen gnomAD |
|
|
CA401768285 rs1187426822 |
328 | Q>H | No |
gnomAD ClinGen |
|
|
rs761650705 CA8909462 |
330 | E>K | No |
ClinGen ExAC TOPMed |
|
|
rs761650705 CA297014284 |
330 | E>Q | No |
ExAC TOPMed ClinGen |
|
|
CA8909461 rs774264889 |
331 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs774264889 CA401768271 |
331 | Q>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 333 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1182290282 CA401768249 |
334 | L>S | No |
ClinGen gnomAD |
|
|
CA401768234 rs1462691596 |
336 | S>L | No |
ClinGen TOPMed |
|
|
CA8909459 rs746081338 |
337 | E>A | No |
ExAC gnomAD ClinGen |
|
|
rs376583827 CA8909458 |
339 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs770981919 CA8909457 |
340 | H>N | No |
ClinGen ExAC gnomAD |
|
|
CA8909455 rs778297945 |
342 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA8909454 rs373683537 |
342 | E>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8909452 rs368467764 |
343 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8909450 rs545500925 CA8909449 |
343 | S>R | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
rs368467764 CA8909453 |
343 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1443432867 CA401768185 |
344 | E>K | No |
ClinGen gnomAD |
|
|
rs1335679810 CA401768154 |
348 | L>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
gnomAD ClinGen NCI-TCGA |
|
CA8909448 rs370267319 |
351 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370267319 CA401768132 |
351 | K>Q | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA401768123 rs1395231428 |
352 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA297014192 rs376427320 |
353 | K>E | No |
ESP TOPMed gnomAD ClinGen |
|
|
CA401768109 rs1414530809 |
354 | V>E | No |
ClinGen gnomAD |
|
| TCGA novel | 354 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401768099 rs1383546701 |
355 | M>I | No |
ClinGen TOPMed |
|
|
rs1469499133 CA401768106 |
355 | M>L | No |
ClinGen gnomAD |
|
|
CA8909446 rs767184512 |
358 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs761809935 CA8909445 |
359 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 360 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1468884811 CA401768047 |
362 | N>K | No |
TOPMed gnomAD ClinGen |
|
|
rs373439523 CA8909443 |
367 | Y>H | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA8909442 rs762667398 |
368 | R>K | No |
ExAC gnomAD ClinGen |
|
|
rs545910335 CA297014150 |
368 | R>W | No |
ClinGen Ensembl |
|
|
rs773249744 CA8909438 |
370 | L>* | No |
ClinGen ExAC gnomAD |
|
|
CA8909440 rs747309699 |
370 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772209448 CA8909437 |
371 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8909436 rs748644520 |
373 | E>G | No |
ClinGen ExAC |
|
|
CA8909434 rs755270843 |
374 | E>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
|
CA8909431 rs186065608 |
376 | C>Y | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
CA8909429 rs377367059 |
377 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377367059 CA8909428 |
377 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8909430 rs755698762 |
377 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756882087 CA8909427 |
379 | E>G | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA8909426 rs751481433 |
380 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs764127527 CA8909425 |
381 | E>K | No |
ExAC gnomAD ClinGen |
|
|
CA8909424 rs201703390 |
382 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1363868902 CA401767918 |
382 | E>K | No |
TOPMed ClinGen |
|
|
rs775128923 CA8909423 |
383 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA401767902 rs1214543122 |
384 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA297014007 rs866762804 |
385 | S>A | No |
Ensembl ClinGen |
|
|
rs200441475 CA8909422 |
386 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401767886 rs1237026179 |
387 | V>I | No |
ClinGen gnomAD |
|
|
CA8909420 rs773483618 |
388 | D>E | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA401767869 rs1303404950 |
389 | E>G | No |
gnomAD ClinGen |
|
|
rs1598490810 CA401767873 |
389 | E>K | No |
ClinGen Ensembl |
|
|
CA401767864 rs1304130914 |
390 | M>V | No |
TOPMed ClinGen |
|
|
CA401767829 rs1430217559 |
394 | A>D | No |
ClinGen gnomAD |
|
|
rs748233631 CA8909417 |
394 | A>S | No |
ExAC gnomAD ClinGen |
|
|
rs774800585 CA8909416 |
395 | T>P | No |
ExAC gnomAD ClinGen |
|
| TCGA novel | 398 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA297013961 rs868679272 |
398 | L>Q | No |
ClinGen Ensembl |
|
|
CA8909415 rs371606599 |
402 | R>* | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
|
rs780250842 CA8909413 |
402 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC TOPMed gnomAD ClinGen NCI-TCGA |
|
rs1598490782 CA401767777 |
403 | K>Q | No |
ClinGen Ensembl |
|
|
rs574345908 CA8909412 |
404 | R>* | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
rs574345908 CA297013942 |
404 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8909411 rs368997111 |
404 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
CA401767765 rs1222879085 |
405 | A>D | No |
ClinGen TOPMed |
|
|
CA401767763 rs1222879085 |
405 | A>V | No |
TOPMed ClinGen |
|
|
CA401767750 rs1413238038 |
407 | D>G | No |
gnomAD ClinGen |
|
| TCGA novel | 408 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs553733476 CA8909408 |
408 | L>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8909409 rs553733476 |
408 | L>V | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
rs1238888956 CA401767741 |
409 | K>E | No |
gnomAD ClinGen |
|
| TCGA novel | 411 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs201379754 CA8909405 |
411 | F>L | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
rs867311422 CA297013889 |
412 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs150608036 CA8909403 |
414 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs764931061 CA8909404 |
414 | T>S | No |
ExAC gnomAD ClinGen |
|
| TCGA novel | 415 | I>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8909402 rs750578486 |
415 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA401767675 rs557602643 |
418 | Y>C | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
| TCGA novel | 418 | Y>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8909401 rs557602643 |
418 | Y>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs761832970 CA8909400 |
420 | K>R | No |
ExAC gnomAD ClinGen |
|
|
CA8909398 rs537544486 |
421 | K>N | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
rs763365832 CA8909397 |
424 | L>F | No |
ClinGen ExAC |
|
|
rs1295406698 CA401767626 |
425 | H>R | No |
ClinGen gnomAD |
|
|
CA401767612 rs1415639600 |
427 | K>E | No |
ClinGen gnomAD |
|
| rs756054046 | 429 | A>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401767588 rs1310873455 |
430 | H>R | No |
ClinGen gnomAD |
|
|
CA8909395 rs776121933 |
431 | D>N | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs769993945 CA8909394 |
433 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA8909393 rs201265784 |
434 | S>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1169100464 CA401767560 |
434 | S>P | No |
gnomAD ClinGen |
|
|
CA401767553 rs1188152282 |
435 | A>E | No |
gnomAD ClinGen |
|
|
CA401767556 rs1415494859 |
435 | A>T | No |
ClinGen gnomAD |
|
|
CA401767550 rs1257207710 |
436 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA401767545 rs1186312797 |
436 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
gnomAD ClinGen NCI-TCGA |
|
CA8909390 rs746702032 |
437 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs770727097 CA8909391 |
437 | W>L | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA401767544 rs1440530718 |
437 | W>R | No |
TOPMed ClinGen |
|
|
CA401767528 rs1203893764 |
439 | A>D | No |
ClinGen gnomAD |
|
|
CA8909389 rs777146265 |
440 | E>K | No |
ExAC gnomAD ClinGen |
|
|
rs752522359 CA8909387 |
443 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1355090554 CA401767496 |
444 | N>D | No |
ClinGen gnomAD |
|
|
CA401767494 rs1291192265 |
444 | N>S | No |
gnomAD ClinGen |
|
|
CA401767486 rs1392963872 |
445 | D>G | No |
gnomAD ClinGen |
|
|
rs1373966102 CA401767473 |
447 | R>K | No |
ClinGen gnomAD |
|
|
CA401767474 rs1598490698 |
447 | R>W | No |
ClinGen Ensembl |
|
| TCGA novel | 449 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8909386 rs778915331 |
450 | N>S | No |
ExAC gnomAD ClinGen |
|
|
CA401767445 rs1355412447 |
451 | A>T | No |
Ensembl ClinGen |
|
|
CA401767435 rs1395951574 |
452 | H>R | No |
ClinGen gnomAD |
|
|
CA8909385 rs754689752 |
453 | N>K | No |
ClinGen ExAC |
|
|
rs1165053189 CA401767427 |
453 | N>S | No |
gnomAD ClinGen |
|
|
CA401767417 rs1460572463 |
455 | Q>* | No |
gnomAD ClinGen |
|
|
CA401767415 rs1460572463 |
455 | Q>K | No |
ClinGen gnomAD |
|
|
rs1415264716 CA401767402 |
456 | K>N | No |
ClinGen gnomAD |
|
|
CA8909383 rs200291990 |
460 | I>T | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
|
rs1203582634 CA401767370 |
461 | E>G | No |
ClinGen TOPMed |
|
|
CA8909382 rs761990529 |
462 | F>L | No |
ExAC gnomAD ClinGen |
|
|
CA401767348 rs1254910980 |
464 | I>T | No |
ClinGen gnomAD |
|
|
rs751844137 CA8909381 |
464 | I>V | No |
ExAC gnomAD ClinGen |
|
| TCGA novel | 465 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 465 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1251773959 CA401767340 |
465 | K>R | No |
TOPMed ClinGen |
|
|
CA8909380 rs367973407 |
466 | L>F | No |
ClinGen ESP ExAC gnomAD |
|
|
CA401767329 rs1334408660 |
467 | L>S | No |
ClinGen TOPMed gnomAD |
|
|
CA8909379 rs555102124 |
468 | E>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 469 | K>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1317233094 CA401767305 |
470 | D>E | No |
gnomAD ClinGen |
|
|
CA401767306 rs775789770 |
470 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs775789770 CA8909378 |
470 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA297013732 rs267605127 |
471 | P>S | No |
ClinGen 1000Genomes TOPMed |
|
|
rs759928938 CA8909376 |
472 | Y>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 473 | G>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8909373 rs141848460 |
475 | D>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs771491722 CA8909374 |
475 | D>H | No |
ExAC gnomAD ClinGen |
|
|
CA401767269 rs1568126802 |
476 | V>A | No |
ClinGen Ensembl |
|
|
CA8909371 rs777499653 |
477 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA401767265 rs1439608913 |
477 | P>S | No |
TOPMed gnomAD ClinGen |
|
|
CA401767267 rs1439608913 |
477 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA8909369 rs199704250 |
479 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs778667385 CA8909368 |
480 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs374741810 CA8909367 |
480 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8909365 rs779818376 |
481 | F>L | No |
ExAC gnomAD ClinGen |
|
|
CA401767242 rs1194337195 |
481 | F>Y | No |
ClinGen gnomAD |
|
|
CA8909364 rs755959490 |
484 | Q>E | No |
ExAC gnomAD ClinGen |
|
|
TCGA novel CA8909362 rs367804987 |
484 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC TOPMed gnomAD NCI-TCGA |
|
rs371705557 CA8909363 |
484 | Q>R | No |
ClinGen ESP ExAC |
|
|
CA401767215 rs1486334271 |
485 | H>R | No |
TOPMed gnomAD ClinGen |
|
|
rs758366025 CA8909361 |
486 | S>P | No |
ExAC gnomAD ClinGen |
|
|
rs1233489901 CA401767198 |
488 | Y>C | No |
ClinGen gnomAD |
|
|
COSM986972 COSM986973 CA8909359 rs765279218 |
488 | Y>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ExAC TOPMed gnomAD ClinGen cosmic curated NCI-TCGA |
|
rs1201660116 CA401767189 |
489 | G>V | No |
ClinGen TOPMed |
|
|
rs777338662 CA8909357 |
490 | P>S | No |
ExAC gnomAD ClinGen |
|
|
CA401767183 rs1319749014 |
491 | S>T | No |
TOPMed gnomAD ClinGen |
|
|
CA401767176 rs1382386723 |
492 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA401767175 rs1382386723 |
492 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1211659372 CA401767165 |
493 | L>F | No |
ClinGen TOPMed |
|
|
CA8909355 rs761129387 |
494 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766796791 CA8909356 |
494 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401767154 rs1186803792 |
495 | W>* | No |
ClinGen TOPMed |
|
|
rs771779166 CA8909353 |
496 | P>A | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs747806640 CA8909352 |
496 | P>L | No |
ExAC ClinGen |
|
|
CA8909354 rs771779166 |
496 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401767148 rs1454226375 |
497 | S>T | No |
ClinGen gnomAD |
|
|
rs371644316 CA8909349 |
500 | T>M | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA401767112 rs755838798 |
502 | A>G | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA8909347 rs755838798 |
502 | A>V | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA401767106 rs1486496680 |
503 | S>F | No |
ClinGen gnomAD |
|
|
CA8909345 rs777804110 |
505 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8909346 rs745702991 |
505 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs1158406578 CA401767090 |
506 | P>L | No |
ClinGen Ensembl |
|
|
rs752900161 CA8909343 |
507 | P>L | No |
ExAC gnomAD ClinGen |
|
|
rs375212305 CA8909344 |
507 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs571592254 CA297013588 |
508 | T>A | No |
ClinGen 1000Genomes |
|
|
CA8909342 rs113967006 |
509 | L>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8909341 rs755124794 |
511 | E>D | No |
ClinGen ExAC |
|
|
rs754334605 CA8909340 |
512 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401767050 rs1313904535 |
513 | P>H | No |
ClinGen gnomAD |
|
|
CA401767041 rs1400756528 |
515 | R>G | No |
gnomAD ClinGen |
|
|
CA401767039 rs1308824372 |
515 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA401767035 rs1282520613 |
515 | R>S | No |
ClinGen TOPMed |
|
|
CA297013582 rs1018429760 |
520 | L>F | No |
TOPMed ClinGen |
|
|
CA401766999 rs1281511095 |
521 | P>L | No |
ClinGen TOPMed |
|
|
rs1008231171 CA297013577 |
522 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs767028750 COSM239470 CA8909339 |
522 | R>W | Variant assessed as Somatic; 0.0 impact. prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs200787711 CA8909338 |
523 | G>E | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
CA8909337 rs376038901 |
524 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1476325451 CA401766982 |
525 | G>E | No |
ClinGen gnomAD |
|
|
rs761524744 CA401766969 |
527 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs761524744 CA8909335 |
527 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA401766963 rs1197752542 |
528 | S>F | No |
ClinGen TOPMed |
|
|
CA401766960 rs1440593923 |
529 | R>G | No |
TOPMed gnomAD ClinGen |
|
|
CA8909334 rs372933464 |
530 | G>D | No |
ESP ExAC gnomAD ClinGen |
|
|
rs1275118403 CA401766954 |
530 | G>S | No |
TOPMed gnomAD ClinGen |
|
|
CA401766934 rs1255616775 |
533 | N>T | No |
ClinGen gnomAD |
|
|
CA8909332 rs757301215 |
535 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1414597384 CA401766917 |
536 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
CA401766916 rs1414597384 |
536 | D>Y | No |
TOPMed gnomAD ClinGen |
|
|
rs769742260 CA8909330 |
537 | H>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 538 | Q>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA297013551 rs994590077 |
539 | I>F | No |
ClinGen TOPMed |
|
|
rs751591813 CA297013546 |
540 | T>A | No |
ClinGen gnomAD |
|
|
rs745837406 CA8909329 |
540 | T>I | No |
ExAC gnomAD ClinGen |
|
|
CA401766879 rs1345978563 |
541 | K>N | No |
ClinGen TOPMed |
|
|
rs781005940 CA401766882 |
541 | K>R | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA8909328 rs781005940 |
541 | K>T | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs536085387 CA297013527 |
542 | E>G | No |
gnomAD ClinGen |
|
|
rs1163937616 CA401766877 |
542 | E>Q | No |
gnomAD ClinGen |
|
|
CA401766865 rs1277742570 |
543 | R>S | No |
ClinGen TOPMed |
|
|
CA401766868 rs1234413300 |
543 | R>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1349303366 CA401766864 |
544 | G>R | No |
TOPMed ClinGen |
|
|
CA401766851 rs186213684 |
545 | E>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1437198246 CA401766844 |
547 | S>G | No |
gnomAD ClinGen |
|
|
CA8909325 rs779285922 |
550 | R>G | No |
ExAC gnomAD ClinGen |
|
|
rs180907713 CA8909324 |
550 | R>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs180907713 CA401766818 |
550 | R>M | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
|
rs1220642325 CA401766816 |
550 | R>S | No |
ClinGen TOPMed |
|
|
rs180907713 CA401766819 |
550 | R>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs753995167 CA8909323 |
552 | T>A | No |
ExAC gnomAD ClinGen |
|
|
CA297013420 rs267605126 |
554 | P>S | No |
ClinGen Ensembl |
|
|
CA8909320 rs756614827 |
555 | H>Y | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs767908977 CA8909319 |
556 | R>S | No |
ExAC gnomAD ClinGen |
|
|
rs1335731740 CA401766775 |
557 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1335731740 CA401766777 |
557 | A>T | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 558 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs762095814 CA8909317 |
558 | P>S | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs1469659127 CA401766761 |
559 | S>F | No |
TOPMed ClinGen |
|
|
rs1159335093 CA401766760 |
560 | D>N | No |
ClinGen TOPMed |
|
|
rs1568126316 CA401766750 |
561 | A>D | No |
Ensembl ClinGen |
|
|
CA8909315 rs763766696 |
561 | A>P | No |
ExAC gnomAD ClinGen |
|
|
rs1325408311 CA401766747 |
562 | G>R | No |
TOPMed gnomAD ClinGen |
|
|
CA401766745 rs1325408311 |
562 | G>W | No |
ClinGen TOPMed gnomAD |
|
|
CA401766741 rs762397560 |
563 | P>A | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs1406924592 CA401766737 |
563 | P>L | No |
TOPMed ClinGen |
|
|
rs762397560 CA8909314 |
563 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1438572795 CA401766729 |
565 | A>S | No |
ClinGen gnomAD |
|
|
rs201563176 CA297013387 |
566 | P>S | No |
1000Genomes ClinGen |
|
|
rs560589174 CA8909312 |
567 | P>L | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
rs776449348 CA8909310 |
568 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA401766710 rs770695791 |
568 | W>* | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs770695791 CA8909309 |
568 | W>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8909308 rs746815692 |
570 | Q>* | No |
ExAC gnomAD ClinGen |
|
|
CA401766699 rs746815692 |
570 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs1298764469 CA401766686 |
571 | D>E | No |
ClinGen gnomAD |
|
|
rs1286750390 CA628978538 |
572 | Y>* | No |
ClinGen gnomAD |
|
|
CA297013335 rs949758132 |
572 | Y>C | No |
TOPMed gnomAD ClinGen |
|
|
CA401766683 rs1218873796 |
572 | Y>H | No |
gnomAD ClinGen |
|
|
rs1218873796 CA401766684 |
572 | Y>N | No |
ClinGen gnomAD |
|
| TCGA novel | 573 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8909305 rs373783585 |
573 | R>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA8909306 rs768978852 |
573 | R>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401766645 rs1352904991 |
577 | P>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 580 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401766624 rs1371740399 |
580 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1240100765 CA401766605 |
583 | Y>C | No |
TOPMed ClinGen |
|
|
CA8909302 rs181052498 |
584 | P>T | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
|
rs757601978 CA401766582 |
587 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757601978 CA8909300 |
587 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757601978 CA8909301 |
587 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764486842 CA401766577 |
588 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8909298 rs764486842 |
588 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8909296 rs752410629 |
589 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC gnomAD ClinGen NCI-TCGA |
|
rs1454680319 CA401766571 |
589 | P>S | No |
gnomAD ClinGen |
|
|
CA8909295 rs372467918 |
591 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8909294 rs189091395 |
592 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8909292 rs200043127 |
592 | R>K | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA8909291 rs760716228 |
592 | R>S | No |
ClinGen ExAC |
|
|
CA8909293 rs189091395 |
592 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1216934922 CA401766552 |
593 | Q>E | No |
gnomAD ClinGen |
|
|
rs1488136752 CA401766540 |
594 | D>G | No |
gnomAD ClinGen |
|
|
CA8909290 rs372181117 |
595 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs772061607 CA8909289 |
595 | R>I | No |
ExAC gnomAD ClinGen |
|
|
rs749511114 CA8909288 |
596 | F>L | No |
ExAC ClinGen |
|
|
CA401766509 rs1568126118 |
599 | N>D | No |
ClinGen Ensembl |
|
|
rs1315266681 CA401766505 |
599 | N>I | No |
ClinGen TOPMed |
|
|
rs553263175 CA297013226 |
600 | C>F | No |
Ensembl ClinGen |
|
|
rs780434676 CA8909286 |
600 | C>R | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA8909285 rs769843721 |
601 | A>V | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA8909284 rs745965014 |
602 | R>G | No |
ExAC gnomAD ClinGen |
|
|
rs1025673791 CA297013219 |
602 | R>T | No |
TOPMed ClinGen |
|
|
rs757679130 CA8909282 |
603 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs747551167 CA8909281 |
603 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA8909280 rs778103066 |
604 | S>P | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs758818191 CA8909279 |
605 | G>E | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs201593910 CA297013175 |
606 | P>S | No |
gnomAD ClinGen |
|
|
rs752282084 CA8909278 |
607 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA401766452 rs566641623 |
609 | L>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8909275 rs566641623 |
609 | L>P | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
rs754466310 CA8909276 |
609 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1476655305 CA401766443 |
611 | S>G | No |
gnomAD ClinGen |
|
|
rs765953508 CA401766437 CA401766436 |
611 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA8909271 rs553017486 |
614 | M>I | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
rs773342667 CA401766417 |
614 | M>K | No |
ExAC gnomAD ClinGen |
|
|
rs773342667 CA8909272 |
614 | M>R | No |
ClinGen ExAC gnomAD |
|
|
rs375980034 CA8909273 |
614 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8909270 rs761703667 |
615 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766244235 CA8909269 |
616 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs539720541 CA8909268 |
618 | D>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8909267 rs571595714 |
619 | K>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8909266 rs776538499 |
619 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771104899 CA8909265 |
620 | M>R | No |
ExAC gnomAD ClinGen |
|
|
CA297013059 rs1001824798 |
622 | G>E | No |
ClinGen TOPMed |
|
|
rs747498099 CA8909264 |
622 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs372430144 CA8909263 |
623 | S>L | No |
ClinGen ESP ExAC gnomAD |
|
|
CA8909262 rs758726068 |
624 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA8909260 rs779388300 |
625 | P>H | No |
ClinGen ExAC gnomAD |
|
|
CA401766347 rs779388300 |
625 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA8909261 rs748538383 |
625 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754556731 CA8909259 |
626 | S>L | No |
ExAC ClinGen |
|
|
rs551761492 CA8909256 |
632 | R>G | No |
1000Genomes ExAC gnomAD ClinGen |
|
| TCGA novel | 632 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401766289 rs1380165615 |
633 | N>K | No |
TOPMed ClinGen |
|
|
rs531847754 CA8909255 |
634 | D>G | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
CA401766278 rs1481919007 |
635 | T>A | No |
gnomAD ClinGen |
|
|
CA8909253 rs201596969 |
636 | K>E | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
CA297012989 rs1053275601 |
636 | K>R | No |
TOPMed ClinGen |
|
|
rs1598490224 CA401766261 |
637 | D>E | No |
ClinGen Ensembl |
|
|
CA401766265 rs1198133139 |
637 | D>G | No |
ClinGen gnomAD |
|
|
rs773995168 CA8909252 |
638 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1275342430 CA401766240 |
641 | N>D | No |
gnomAD ClinGen |
|
|
CA8909250 rs200484572 |
641 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs763985842 CA8909251 |
641 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA401766230 rs1256648104 |
642 | L>F | No |
ClinGen TOPMed |
|
|
CA8909249 CA401766222 rs776967162 |
643 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1374035960 CA401766216 |
644 | V>G | No |
gnomAD ClinGen |
|
|
CA401766220 rs1225348348 |
644 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1225348348 CA401766219 |
644 | V>M | No |
TOPMed gnomAD ClinGen |
|
|
rs1444024437 CA401766214 |
645 | P>A | No |
TOPMed gnomAD ClinGen |
|
|
rs747125431 CA8909247 |
645 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1444024437 CA401766213 |
645 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1444024437 CA401766215 |
645 | P>T | No |
TOPMed gnomAD ClinGen |
|
|
rs773663399 CA8909246 |
646 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA401766198 rs1368206712 |
647 | S>L | No |
gnomAD ClinGen |
|
|
rs1311368240 CA401766191 |
649 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1480064296 CA401766180 |
650 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
TOPMed ClinGen NCI-TCGA |
|
CA401766183 rs1266619573 |
650 | P>S | No |
TOPMed ClinGen |
|
|
COSM1202548 COSM1202549 CA297012906 rs538241348 |
651 | A>T | large_intestine [Cosmic] | No |
TOPMed gnomAD ClinGen cosmic curated |
|
rs779142037 CA8909243 |
652 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401766170 rs1451058868 |
652 | E>G | No |
TOPMed ClinGen |
|
|
CA8909242 rs549615249 |
653 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA401766156 rs1254966385 |
654 | E>G | No |
gnomAD ClinGen |
|
|
CA401766149 rs1400920070 |
655 | A>V | No |
TOPMed ClinGen |
|
|
CA8909240 rs200847378 |
656 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA401766145 rs200847378 |
656 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs755643902 CA8909239 |
657 | G>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 657 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8909237 rs780898304 |
658 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA401766124 rs1308521275 |
660 | F>L | No |
TOPMed gnomAD ClinGen |
|
|
CA8909236 rs374860900 |
660 | F>S | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA8909235 rs199889517 |
661 | V>I | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
rs987044949 CA297012842 |
662 | P>R | No |
ClinGen TOPMed |
|
|
CA401766099 rs1236998948 |
664 | P>H | No |
TOPMed ClinGen |
|
|
CA8909234 rs763780043 |
665 | L>F | No |
ExAC gnomAD ClinGen |
|
|
rs762816904 CA8909233 |
666 | A>T | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA8909232 rs766613437 |
667 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8909230 rs184265318 |
667 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs766613437 CA8909231 |
667 | P>S | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs202027269 CA401766082 |
668 | I>F | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
|
rs202027269 CA8909229 |
668 | I>V | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
|
rs772207242 CA8909228 |
669 | R>G | No |
ExAC gnomAD ClinGen |
|
|
CA8909227 rs762214213 |
669 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8909226 rs774936364 |
670 | G>C | No |
ClinGen ExAC gnomAD |
|
|
CA8909222 rs563742083 |
671 | L>S | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
CA297012782 rs1017310581 |
672 | L>W | No |
TOPMed ClinGen |
|
|
COSM243898 CA401766044 rs1486039581 |
674 | P>L | Variant assessed as Somatic; 0.0 impact. prostate [NCI-TCGA, Cosmic] | No |
gnomAD ClinGen cosmic curated NCI-TCGA |
|
CA8909220 rs200294132 |
675 | V>G | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA401766039 rs1214295514 |
675 | V>L | No |
gnomAD ClinGen |
|
|
CA401766035 rs1233996450 |
676 | D>H | No |
TOPMed gnomAD ClinGen |
|
|
rs112544817 CA8909217 |
677 | T>A | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA8909216 rs200236064 |
677 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8909214 rs765060162 |
678 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8909212 rs750702452 |
679 | G>D | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs760886828 CA8909213 |
679 | G>S | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA8909211 rs370961898 |
680 | P>L | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
|
rs1465657898 CA401766002 |
681 | F>L | No |
ClinGen gnomAD |
|
|
rs1456064181 CA401766008 |
681 | F>L | No |
gnomAD ClinGen |
|
|
CA401766001 rs9946136 |
682 | I>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs61747183 RCV000957969 CA8909207 |
682 | I>M | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen ClinVar dbSNP |
|
|
CA8909209 rs9946136 VAR_046956 |
682 | I>V | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen UniProt dbSNP |
|
|
rs763417371 CA8909206 |
684 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA8909204 rs763423717 |
685 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM3796310 COSM3796309 rs775961866 CA8909205 |
685 | G>R | Variant assessed as Somatic; 0.0001848 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs776435484 CA8909202 |
686 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs116535043 RCV000971660 CA8909203 |
686 | P>T | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen ClinVar dbSNP |
|
|
rs1199817199 CA401765969 |
688 | F>I | No |
ClinGen TOPMed gnomAD |
|
|
rs777199287 CA8909200 |
688 | F>L | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA401765965 rs1184933341 |
688 | F>S | No |
gnomAD ClinGen |
|
|
rs748150288 CA8909197 |
689 | P>H | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs748150288 CA401765960 |
689 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401765961 rs758325773 |
689 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA8909198 rs758325773 |
689 | P>T | No |
ClinGen ExAC gnomAD |
|
| rs766584848 | 690 | P>H | Variant assessed as Somatic; 9.24e-05 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8909194 rs193288240 |
690 | P>L | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA8909193 rs193288240 |
690 | P>Q | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA401765956 rs193288240 |
690 | P>R | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA8909195 rs754785321 |
690 | P>S | No |
ExAC gnomAD ClinGen |
|
|
CA401765950 rs1335382788 |
691 | P>L | No |
ClinGen gnomAD |
|
|
rs1228614699 CA401765953 |
691 | P>S | No |
ClinGen TOPMed |
|
|
CA297012646 rs569260453 |
692 | P>L | No |
ClinGen 1000Genomes |
|
|
rs1395967078 CA401765943 |
693 | P>A | No |
gnomAD ClinGen |
|
|
CA8909191 rs757233842 |
693 | P>L | No |
ExAC gnomAD ClinGen |
|
|
rs1169771779 CA401765936 |
694 | G>A | No |
TOPMed gnomAD ClinGen |
|
|
CA401765934 rs1169771779 |
694 | G>E | No |
TOPMed gnomAD ClinGen |
|
|
CA401765929 rs764116396 |
695 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA8909189 rs764116396 |
695 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs1258682748 CA401765926 |
696 | V>G | No |
ClinGen TOPMed |
|
|
rs114380529 RCV000971163 CA8909188 |
696 | V>M | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen ClinVar dbSNP |
|
|
CA8909186 rs765639339 |
697 | F>L | No |
ExAC ClinGen |
|
|
rs776197193 CA8909187 |
697 | F>V | No |
ExAC gnomAD ClinGen |
|
|
rs781405913 CA297012611 |
698 | G>E | No |
ClinGen Ensembl |
|
|
rs759982266 CA8909185 |
699 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA8909184 rs776380466 |
699 | A>V | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA8909181 rs548796905 |
701 | P>R | No |
1000Genomes ExAC TOPMed gnomAD ClinGen |
|
|
CA8909180 rs530344089 |
702 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1598489991 CA401765888 |
703 | Y>D | No |
ClinGen Ensembl |
|
|
CA8909178 rs778830340 |
704 | F>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 705 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8909177 rs569432026 |
705 | S>P | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs779760341 CA8909175 |
706 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401765863 rs1339264501 |
707 | R>K | No |
ClinGen gnomAD |
|
|
CA401765858 rs992707715 |
708 | D>N | No |
TOPMed gnomAD ClinGen |
|
|
CA297012543 rs992707715 |
708 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1304850332 CA401765848 |
709 | V>A | No |
ClinGen TOPMed |
|
|
CA8909173 rs757466641 |
709 | V>F | No |
ExAC gnomAD ClinGen |
|
| TCGA novel | 709 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1359571591 CA401765836 |
711 | G>D | No |
TOPMed ClinGen |
|
|
rs1278715469 CA401765829 |
712 | P>L | No |
ClinGen TOPMed |
|
|
rs758421486 CA8909170 |
713 | P>S | No |
ExAC gnomAD ClinGen |
|
|
CA401765821 rs1471752985 |
714 | R>C | Variant assessed as Somatic; 4.62e-05 impact. [NCI-TCGA] | No |
gnomAD ClinGen NCI-TCGA |
|
rs373446707 CA8909167 |
714 | R>H | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA8909168 rs373446707 |
714 | R>L | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA401765823 rs1471752985 |
714 | R>S | No |
ClinGen gnomAD |
|
|
rs1178700849 CA401765817 |
715 | A>S | No |
gnomAD ClinGen |
|
|
CA8909166 rs369655419 |
716 | P>A | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA401765809 rs1215138705 |
716 | P>L | No |
gnomAD ClinGen |
|
|
rs1211773071 CA401765798 |
718 | A>T | No |
TOPMed ClinGen |
|
|
rs1290994050 CA401765790 |
719 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
CA401765793 rs1240025081 |
719 | M>V | No |
ClinGen TOPMed |
|
|
rs1193403220 CA401765767 |
722 | V>A | No |
TOPMed ClinGen |
|
|
rs760363760 CA8909163 |
722 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA8909162 rs772756882 |
723 | Y>* | No |
ExAC gnomAD ClinGen |
|
|
CA8909160 rs761346791 |
725 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8909158 rs768556331 |
726 | R>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 729 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1017290645 CA297012459 |
731 | Y>* | No |
ClinGen TOPMed |
|
|
CA401765710 rs1598489922 |
731 | Y>C | No |
ClinGen Ensembl |
|
|
rs749260943 CA8909157 |
732 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779890809 CA8909156 |
732 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs372016465 CA8909155 |
733 | P>A | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
|
rs372016465 CA8909153 |
733 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372016465 CA8909154 |
733 | P>T | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA401765699 rs1298570567 |
734 | P>A | No |
ClinGen TOPMed |
|
|
rs1342216573 CA401765695 |
734 | P>L | No |
ClinGen TOPMed |
|
|
CA8909152 rs369191131 |
735 | R>G | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
|
rs1245825013 CA401765684 |
736 | P>R | No |
gnomAD ClinGen |
|
|
rs1478148105 CA401765686 |
736 | P>S | No |
ClinGen gnomAD |
|
|
rs1196317712 CA401765681 |
737 | A>P | No |
gnomAD ClinGen |
|
|
rs1433353424 CA401765670 |
738 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA8909149 rs755538577 |
739 | F>I | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs766708550 CA8909147 |
739 | F>L | No |
ClinGen ExAC TOPMed |
|
|
CA8909148 rs754360939 |
739 | F>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1489496622 CA401765661 |
740 | P>S | No |
ClinGen TOPMed |
|
|
rs1489496622 CA401765663 |
740 | P>T | No |
TOPMed ClinGen |
|
|
rs1283931790 CA401765654 |
741 | P>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
gnomAD ClinGen NCI-TCGA |
| rs771653179 | 741 | P>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8909139 rs550845102 |
742 | A>D | No |
1000Genomes ExAC TOPMed ClinGen |
|
|
rs550845102 CA8909140 |
742 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed |
|
|
rs1221082236 CA401765650 |
742 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
gnomAD ClinGen NCI-TCGA |
|
CA8909141 rs550845102 |
742 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed |
|
|
rs773818348 CA8909137 |
743 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA8909138 rs761505835 |
743 | P>S | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA401765627 rs1434586573 |
746 | F>S | No |
TOPMed gnomAD ClinGen |
No associated diseases with Q96RT6
No regional properties for Q96RT6
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q96RT6 | |||
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| endoplasmic reticulum exit site | An endoplasmic reticulum part at which COPII-coated vesicles are produced. |
| endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| endoplasmic reticulum to Golgi vesicle-mediated transport | The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi. |
| protein secretion | The controlled release of proteins from a cell. |
| vesicle cargo loading | The formation of a macromolecular complex between the coat proteins and proteins and/or lipoproteins that are going to be transported by a vesicle. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q96PC5 | MIA2 | Melanoma inhibitory activity protein 2 | Homo sapiens (Human) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MRPDSHPYGF | PWELVIRAAV | AGFFAVLFLW | RSFRSVTSRL | YVRREKKFAV | ALSGLIEEKC |
| 70 | 80 | 90 | 100 | 110 | 120 |
| KLLEKFSLVQ | KEYEGYEVES | SLKNASFEKE | ATEAQSLEAT | CEKLNRFNSE | LVHEILCLEK |
| 130 | 140 | 150 | 160 | 170 | 180 |
| ELKEEKSKHS | EQNELMADIS | KRIQSLEDES | KSLKSQVAEA | KMTFKRFQAN | EERLEIEIQD |
| 190 | 200 | 210 | 220 | 230 | 240 |
| AWKENSELQE | SQKQLLQEAE | VWKEQVSELI | KQKRTFEDSK | VHAEQVLNDK | ENHIKTLTER |
| 250 | 260 | 270 | 280 | 290 | 300 |
| LLKMKDGVAM | LEEDVTDDDN | LELEMNSESE | DGAYLDNPPK | GALKKLIHAA | KLNASLKTLE |
| 310 | 320 | 330 | 340 | 350 | 360 |
| GERNQIYIQL | SEVDKTKEEL | TEHIKNLQTE | QASLQSENTH | FESENQKLQQ | KLKVMTELYQ |
| 370 | 380 | 390 | 400 | 410 | 420 |
| ENEMKLYRKL | IVEEKCRLEK | EEKLSKVDEM | ISHATEELET | YRKRAKDLKE | FEKTIHFYQK |
| 430 | 440 | 450 | 460 | 470 | 480 |
| KIILHEKKAH | DNWSAAWTAE | RNLNDLRKEN | AHNRQKLTEI | EFKIKLLEKD | PYGLDVPNTA |
| 490 | 500 | 510 | 520 | 530 | 540 |
| FGRQHSPYGP | SPLGWPSSET | RASLYPPTLL | EGPLRLSPLL | PRGGGRGSRG | PGNPPDHQIT |
| 550 | 560 | 570 | 580 | 590 | 600 |
| KERGESSCDR | LTDPHRAPSD | AGPLAPPWEQ | DYRMMFPPPG | QSYPDSALPP | QRQDRFYSNC |
| 610 | 620 | 630 | 640 | 650 | 660 |
| ARLSGPAELR | SFNMPSLDKM | DGSMPSEMES | SRNDTKDNLG | NLKVPDSSLP | AENEATGPGF |
| 670 | 680 | 690 | 700 | 710 | 720 |
| VPPPLAPIRG | LLFPVDTRGP | FIRRGPPFPP | PPPGTVFGAS | PDYFSPRDVP | GPPRAPFAMR |
| 730 | 740 | ||||
| NVYLPRGFLP | YRPPRPAFFP | PAPTF |