Q96NY9
Gene name |
MUS81 |
Protein name |
Crossover junction endonuclease MUS81 |
Names |
|
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:80198 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
10 structures for Q96NY9
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 2MC3 | NMR | - | A | 127-230 | PDB |
| 2ZIX | X-ray | 350 A | A | 246-551 | PDB |
| 4P0P | X-ray | 280 A | A | 246-551 | PDB |
| 4P0Q | X-ray | 285 A | A | 246-551 | PDB |
| 4P0R | X-ray | 650 A | A/C | 246-551 | PDB |
| 4P0S | X-ray | 600 A | A/C/E/G | 246-551 | PDB |
| 6VWB | NMR | - | A | 2-90 | PDB |
| 7BU5 | X-ray | 180 A | A | 2-99 | PDB |
| 7F6L | X-ray | 320 A | A | 246-551 | PDB |
| AF-Q96NY9-F1 | Predicted | AlphaFoldDB |
521 variants for Q96NY9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA381319149 rs1372835909 |
2 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA224010381 rs1018632378 |
3 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA381319197 rs1331750240 |
4 | P>L | No |
ClinGen gnomAD |
|
|
rs1331750240 CA381319195 |
4 | P>R | No |
ClinGen gnomAD |
|
|
rs1273165800 CA381319257 |
7 | L>M | No |
ClinGen gnomAD |
|
|
CA381319295 rs1416839221 |
8 | G>A | No |
ClinGen TOPMed |
|
|
rs1233518519 CA381319281 |
8 | G>S | No |
ClinGen gnomAD |
|
|
rs1298024056 CA381319299 |
9 | R>W | No |
ClinGen gnomAD |
|
|
CA6109612 rs768885045 |
11 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381319373 rs768885045 |
11 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381319393 rs1451830059 |
12 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA381319391 rs1451830059 |
12 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs962881541 CA381319385 |
12 | P>S | No |
ClinGen gnomAD |
|
|
CA224010387 rs962881541 |
12 | P>T | No |
ClinGen gnomAD |
|
|
rs1223056097 CA381319402 |
13 | L>V | No |
ClinGen gnomAD |
|
|
rs1565263922 CA381319424 |
14 | P>R | No |
ClinGen Ensembl |
|
|
CA381319408 rs1250630656 |
14 | P>S | No |
ClinGen gnomAD |
|
|
CA224010388 rs974479562 |
15 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1211525012 CA381319502 |
17 | P>L | No |
ClinGen TOPMed |
|
|
CA381319493 rs1032767138 |
17 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA224010394 rs1032767138 |
17 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA381319532 rs957471087 |
19 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA224010396 rs957471087 |
19 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA381319552 rs1391648979 |
20 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1407313843 CA381319557 |
20 | L>P | No |
ClinGen gnomAD |
|
|
rs1440054466 CA381319577 |
22 | V>F | No |
ClinGen gnomAD |
|
|
rs1321206091 CA381319609 |
23 | R>H | No |
ClinGen gnomAD |
|
|
rs1279794327 CA381319623 |
24 | W>* | No |
ClinGen TOPMed |
|
|
rs1591052966 CA381319648 |
26 | T>A | No |
ClinGen Ensembl |
|
|
CA381319657 rs1412702026 |
26 | T>I | No |
ClinGen TOPMed |
|
|
rs1224889243 CA381319662 |
27 | E>K | No |
ClinGen gnomAD |
|
|
rs767632887 CA6109616 |
28 | W>R | No |
ClinGen ExAC |
|
|
CA6109618 rs773419651 |
29 | R>L | No |
ClinGen ExAC |
|
|
CA381319697 rs1354652689 |
29 | R>W | No |
ClinGen TOPMed |
|
|
CA381319723 rs1270702037 |
30 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA381319714 rs1229714160 |
30 | D>G | No |
ClinGen gnomAD |
|
| TCGA novel | 31 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381319772 rs1209898241 |
32 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA224010435 rs531054625 |
33 | T>N | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA6109620 rs764964920 |
34 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752664141 CA6109622 |
34 | R>H | No |
ClinGen ExAC |
|
|
rs752664141 CA6109621 |
34 | R>L | No |
ClinGen ExAC |
|
|
CA6109624 rs751020184 |
35 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA381319820 rs751020184 |
35 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1473881768 CA381319824 |
35 | S>N | No |
ClinGen gnomAD |
|
|
CA381319865 rs1425349544 |
37 | R>C | No |
ClinGen TOPMed |
|
|
CA6109625 rs13817 VAR_025340 |
37 | R>H | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA381319872 rs13817 |
37 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6109627 rs570698749 |
38 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6109626 rs570698749 |
38 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6109628 rs756567160 |
38 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780522545 CA6109629 |
39 | T>K | No |
ClinGen ExAC gnomAD |
|
|
CA381319918 rs780522545 |
39 | T>R | No |
ClinGen ExAC gnomAD |
|
|
CA381319933 rs1249637273 |
40 | R>C | No |
ClinGen TOPMed |
|
|
rs370267349 CA6109630 |
40 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381319960 rs1380483951 |
41 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA6109632 rs774561883 |
44 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 44 | Q>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1340892035 CA381320095 |
44 | Q>R | No |
ClinGen gnomAD |
|
|
CA381320126 CA6109633 rs748185214 |
45 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6109662 rs766974550 |
46 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760458484 CA6109664 |
47 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA6109665 rs766138528 |
48 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224010688 rs902399243 |
48 | R>H | No |
ClinGen gnomAD |
|
|
rs566606681 CA224010689 |
49 | S>C | No |
ClinGen 1000Genomes |
|
|
rs999466708 CA224010690 |
50 | L>F | No |
ClinGen Ensembl |
|
|
rs1343385804 CA381320420 |
52 | R>W | No |
ClinGen gnomAD |
|
|
CA381320498 rs1249763876 |
54 | P>L | No |
ClinGen gnomAD |
|
|
rs1206881614 CA381320490 |
54 | P>S | No |
ClinGen gnomAD |
|
|
CA6109667 rs753487888 |
55 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA6109668 rs376495127 |
56 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6109669 rs779298802 |
60 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6109670 rs753186324 |
62 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs1370927444 CA381320756 |
64 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA6109673 rs777773312 |
65 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6109672 rs777773312 |
65 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746039902 CA6109676 |
71 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs768365383 CA6109677 |
72 | G>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 72 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs774160660 CA6109678 |
75 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224010801 rs772028651 |
75 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs772028651 CA6109680 |
75 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs774160660 CA6109679 |
75 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1382202859 CA381321110 |
76 | M>R | No |
ClinGen TOPMed |
|
|
CA381321150 rs989074482 |
78 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1591053645 CA381321144 |
78 | D>G | No |
ClinGen Ensembl |
|
|
CA6109681 rs772921104 |
79 | E>K | No |
ClinGen ExAC TOPMed |
|
|
rs760278675 CA381321199 |
81 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765941773 CA6109683 |
82 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA381321300 rs1211738573 |
85 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1211738573 CA381321299 |
85 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA6109685 rs753579826 |
85 | R>P | No |
ClinGen ExAC gnomAD |
|
|
CA6109684 rs753579826 |
85 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA6109686 rs765572400 |
86 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780859387 CA224010843 |
89 | G>C | No |
ClinGen gnomAD |
|
|
rs1393648514 CA381321936 |
90 | D>G | No |
ClinGen gnomAD |
|
|
rs767629570 CA6109710 |
91 | H>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381321998 rs1258303966 |
91 | H>R | No |
ClinGen TOPMed |
|
|
rs767629570 CA381321984 |
91 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381322005 rs1168863297 |
92 | A>T | No |
ClinGen gnomAD |
|
|
CA6109711 rs750500996 |
93 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1350588462 CA381322258 |
97 | S>F | No |
ClinGen gnomAD |
|
|
CA381322295 rs1368702303 |
98 | G>E | No |
ClinGen gnomAD |
|
|
rs1327921046 CA381322291 |
98 | G>R | No |
ClinGen gnomAD |
|
|
rs1233222635 CA381322309 |
99 | E>K | No |
ClinGen gnomAD |
|
|
CA6109713 rs780324950 |
100 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs900168509 CA224010990 |
100 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs561972931 CA6109714 |
101 | S>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs561972931 CA6109715 |
101 | S>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1336173878 CA381322400 |
102 | P>L | No |
ClinGen TOPMed |
|
|
CA381322429 rs1271658848 |
103 | A>V | No |
ClinGen gnomAD |
|
|
rs777682352 CA6109716 |
104 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA224011008 rs1026222102 |
105 | Q>P | No |
ClinGen gnomAD |
|
|
CA224011010 rs138876239 |
106 | G>R | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1194291376 CA381322513 |
107 | R>* | No |
ClinGen gnomAD |
|
|
rs368564921 CA6109717 |
107 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6109718 rs770980629 |
108 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs892851272 CA224011014 |
108 | L>R | No |
ClinGen TOPMed |
|
|
rs1167615294 CA381322564 COSM930521 COSM1585923 |
109 | A>S | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1167615294 CA381322551 |
109 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs776347471 CA6109720 |
110 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6109721 rs745388656 |
111 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1353966876 CA381322722 |
113 | D>A | No |
ClinGen TOPMed |
|
|
CA224011052 rs748054705 |
113 | D>N | No |
ClinGen gnomAD |
|
|
rs149431486 CA6109723 |
114 | S>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA224011061 rs34381357 |
115 | S>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
VAR_061988 rs34381357 CA6109724 |
115 | S>F | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1428203503 CA381322814 |
116 | M>V | No |
ClinGen gnomAD |
|
|
rs1002789305 CA224011084 |
117 | P>L | No |
ClinGen TOPMed |
|
|
rs762166588 CA6109744 |
118 | V>F | No |
ClinGen ExAC gnomAD |
|
|
rs772360926 CA6109745 |
119 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381323115 rs1468561064 |
120 | A>V | No |
ClinGen gnomAD |
|
|
CA381323127 rs1375886241 |
121 | Q>* | No |
ClinGen gnomAD |
|
|
CA381323264 rs1440479669 |
124 | A>V | No |
ClinGen TOPMed |
|
|
CA6109748 rs761059610 |
127 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs1488023683 CA381323406 |
130 | Y>C | No |
ClinGen TOPMed |
|
|
CA224011335 rs922114625 |
131 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1334466674 CA381323443 |
131 | W>C | No |
ClinGen gnomAD |
|
|
rs1240114754 CA381323449 |
132 | P>T | No |
ClinGen gnomAD |
|
|
CA381323473 rs753852784 |
133 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs753852784 CA6109750 |
133 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs759904678 CA6109751 |
133 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA381323490 rs143830327 |
134 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381323503 rs932199815 |
134 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
CA224011360 rs932199815 |
134 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA6109752 rs143830327 |
134 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381323536 rs1172539432 |
135 | H>Q | No |
ClinGen gnomAD |
|
|
rs147280124 CA224011361 |
139 | R>* | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs147280124 CA224011362 |
139 | R>G | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs148465534 CA224011381 |
139 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs148465534 CA6109754 |
139 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs148465534 CA6109753 |
139 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1591055347 CA381323645 |
140 | V>G | No |
ClinGen Ensembl |
|
|
CA381323655 rs1435981788 |
141 | I>V | No |
ClinGen gnomAD |
|
|
rs1178001089 CA381323707 |
143 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1178001089 CA381323705 |
143 | L>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1455365199 CA381323716 |
144 | V>M | No |
ClinGen gnomAD |
|
|
CA679351849 rs1158643123 |
146 | Y>* | No |
ClinGen TOPMed |
|
|
rs779669908 CA381323864 |
147 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779669908 CA6109758 |
147 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755982969 CA6109757 |
147 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1226127758 CA381323924 |
150 | L>Q | No |
ClinGen gnomAD |
|
|
CA6109793 rs774562099 |
152 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6109792 rs764214410 |
152 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs760397816 CA6109794 |
153 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1585922 CA381324222 rs1455614900 COSM930522 |
154 | G>D | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1455614900 CA381324226 |
154 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs754889802 CA381324241 |
155 | H>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6109798 rs754889802 |
155 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753816989 CA6109797 |
155 | H>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6109799 rs764789468 |
159 | T>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 159 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381324430 rs1226533065 |
161 | E>K | No |
ClinGen gnomAD |
|
|
rs1213466910 CA381324538 |
164 | L>R | No |
ClinGen gnomAD |
|
|
rs746626563 CA6109803 |
166 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA6109805 rs527610391 |
166 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 167 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1043622136 CA224011594 |
168 | A>S | No |
ClinGen Ensembl |
|
|
rs200286461 CA6109807 |
171 | S>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs200286461 CA6109806 |
171 | S>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs768720227 CA6109810 |
173 | R>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6109821 rs751209049 |
175 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs139123311 CA6109823 |
180 | R>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs386754402 CA224012816 |
180 | R>P | No |
ClinGen Ensembl |
|
|
VAR_038521 rs545500 CA6109824 |
180 | R>P | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA381326993 rs545500 |
180 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs564497212 CA6109825 |
181 | P>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA381327053 rs1476856612 COSM1215970 COSM1215969 |
182 | W>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs1175900807 CA381327073 |
183 | P>Q | No |
ClinGen gnomAD |
|
|
CA381327091 rs1176196212 |
185 | L>H | No |
ClinGen gnomAD |
|
|
CA6109826 rs780716342 |
185 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs374977599 CA6109828 |
186 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs758183083 CA6109829 |
186 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs758183083 CA381327105 |
186 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
VAR_021990 rs2298447 CA6109832 |
189 | L>F | No |
ClinGen UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
CA6109833 rs748379441 |
189 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA224012889 rs938369141 |
190 | H>R | No |
ClinGen TOPMed |
|
|
rs773358939 CA6109835 |
192 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6109836 rs759341246 |
194 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381327437 rs1319948037 |
196 | R>G | No |
ClinGen gnomAD |
|
|
CA381327505 rs1591056316 |
198 | H>P | No |
ClinGen Ensembl |
|
|
rs146515142 CA6109838 |
199 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1345417017 CA381327570 |
200 | P>A | No |
ClinGen gnomAD |
|
|
rs1308680322 CA381327599 |
201 | A>T | No |
ClinGen gnomAD |
|
|
rs865965194 CA224012905 |
202 | R>M | No |
ClinGen Ensembl |
|
|
rs371319164 CA6109863 |
206 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6109864 rs766714208 |
206 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA381328080 rs766714208 |
206 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA6109865 rs199531637 |
207 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1355472259 CA381328162 |
208 | E>K | No |
ClinGen gnomAD |
|
|
rs758506242 CA6109869 |
211 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA6109870 rs777801229 |
214 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1286736299 CA381328446 |
216 | L>F | No |
ClinGen gnomAD |
|
|
rs867724382 CA224013282 |
217 | A>V | No |
ClinGen Ensembl |
|
|
rs757454968 CA224013296 |
218 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757454968 CA6109872 |
218 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1486732831 CA381328540 |
219 | S>L | No |
ClinGen gnomAD |
|
|
rs768277330 CA6109875 |
221 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6109874 rs749113036 |
221 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 223 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6109876 rs774364160 |
225 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA381328666 rs1158961343 |
226 | N>K | No |
ClinGen gnomAD |
|
|
rs748054944 CA6109877 |
227 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA6109880 rs553992715 |
230 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6109881 rs368978893 |
230 | G>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs759971585 CA6109883 |
231 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs776093923 CA6109882 |
231 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765478661 CA6109884 |
232 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381328891 rs1351880092 |
233 | E>D | No |
ClinGen gnomAD |
|
|
CA6109885 rs753244507 |
233 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1281384502 CA381328915 |
234 | P>L | No |
ClinGen gnomAD |
|
|
CA6109886 rs758881631 |
234 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6109887 rs764218819 |
235 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs117136631 CA6109888 |
236 | G>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1255504092 CA381328985 |
237 | E>K | No |
ClinGen gnomAD |
|
|
rs1441790632 CA381329093 |
239 | T>R | No |
ClinGen gnomAD |
|
|
CA6109889 rs757215929 |
241 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381329168 rs1565266933 |
242 | P>Q | No |
ClinGen Ensembl |
|
|
CA6109890 rs781489811 |
243 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381329261 rs1565266965 |
246 | S>T | No |
ClinGen Ensembl |
|
|
rs377710123 CA224013385 |
248 | E>K | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA224013389 rs955828959 |
249 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA381329690 rs1420769828 |
250 | A>V | No |
ClinGen gnomAD |
|
|
rs756265627 CA6109912 |
251 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs1591058060 CA381329851 |
255 | V>G | No |
ClinGen Ensembl |
|
|
CA381329970 rs1456761447 |
259 | P>L | No |
ClinGen gnomAD |
|
|
CA224013605 rs947392960 |
260 | L>P | No |
ClinGen TOPMed |
|
|
rs778907595 CA6109913 |
260 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA6109914 rs752548117 |
263 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381330153 rs777878677 |
265 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs777878677 CA6109916 |
265 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA6109917 rs746885286 |
268 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA6109918 rs770515783 |
268 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs1242391669 CA381330279 |
269 | V>E | No |
ClinGen gnomAD |
|
|
CA224013619 rs549884196 |
269 | V>M | No |
ClinGen 1000Genomes |
|
| TCGA novel | 272 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6109921 rs769329736 |
274 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775054429 CA6109922 |
275 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381330464 rs763320107 |
276 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1260412539 CA381330451 |
276 | G>S | No |
ClinGen gnomAD |
|
|
CA6109923 rs763320107 |
276 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1416645763 CA381330479 |
277 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA6109925 rs774866031 |
278 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs143145862 CA6109926 |
279 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs143145862 CA6109927 |
279 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs895978458 CA224013625 |
279 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA381330674 rs1565267528 |
281 | G>R | No |
ClinGen Ensembl |
|
|
CA381330693 rs1306763011 |
282 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA381330786 rs1280137486 |
284 | R>S | No |
ClinGen gnomAD |
|
|
rs1219391440 CA381330763 |
284 | R>T | No |
ClinGen TOPMed gnomAD |
|
|
rs769044872 CA6109942 |
285 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6109944 rs558498550 |
289 | R>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs772450771 CA6109945 |
289 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773713789 CA6109946 |
290 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA6109948 rs146653927 |
292 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs867764333 CA6109950 |
293 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs777034208 CA6109949 |
293 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs376699792 CA6109953 |
295 | H>P | No |
ClinGen ESP ExAC gnomAD |
|
|
CA6109954 rs751310933 |
295 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224013871 rs971126657 |
296 | V>G | No |
ClinGen Ensembl |
|
|
rs148855695 CA6109955 |
296 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6109956 rs148855695 |
296 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs750322439 CA6109957 |
299 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs150334520 CA6109958 |
299 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA381331244 rs1591058651 |
300 | V>G | No |
ClinGen Ensembl |
|
|
CA381331226 rs1365024672 |
300 | V>M | No |
ClinGen gnomAD |
|
|
CA6109960 rs145333207 |
301 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6109962 rs752901382 |
301 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA6109961 rs145333207 |
301 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1320652215 CA381331302 |
302 | K>R | No |
ClinGen gnomAD |
|
|
rs1257827008 CA381331364 |
304 | H>R | No |
ClinGen gnomAD |
|
|
rs372873814 CA6109965 |
305 | V>A | No |
ClinGen ESP ExAC gnomAD |
|
|
rs367661848 COSM1215971 CA6109964 COSM1215972 |
305 | V>I | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA381331577 rs1381746327 |
310 | W>* | No |
ClinGen TOPMed |
|
|
CA381331646 rs1477803224 |
312 | A>T | No |
ClinGen gnomAD |
|
|
CA381331681 rs1296813027 |
312 | A>V | No |
ClinGen TOPMed |
|
|
CA381331806 rs1478767631 |
315 | T>A | No |
ClinGen gnomAD |
|
|
CA6109968 rs776841932 |
317 | P>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 318 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6109970 rs759906850 |
319 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA381332311 rs1314779262 |
322 | N>H | No |
ClinGen TOPMed |
|
| TCGA novel | 322 | N>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1591058971 CA381332330 |
322 | N>T | No |
ClinGen Ensembl |
|
|
rs1314779262 CA381332317 |
322 | N>Y | No |
ClinGen TOPMed |
|
|
rs891707695 CA224014065 |
323 | P>S | No |
ClinGen Ensembl |
|
|
rs1009821955 CA224014072 |
324 | G>E | No |
ClinGen Ensembl |
|
|
rs984584011 CA224014079 |
325 | E>G | No |
ClinGen Ensembl |
|
|
rs764774705 CA6109998 |
325 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA381332602 rs1351527409 |
330 | H>D | No |
ClinGen TOPMed |
|
|
rs147126237 CA6110002 |
331 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs778068814 CA6110001 |
331 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381332680 rs1565267935 |
333 | E>A | No |
ClinGen Ensembl |
|
|
CA6110004 rs541005540 |
334 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6110005 rs746333896 |
334 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 335 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs767104160 CA224014091 |
336 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
CA224014092 rs750077675 |
336 | R>Q | No |
ClinGen gnomAD |
|
|
rs552242146 CA6110009 |
338 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1591059102 CA381332851 |
339 | D>A | No |
ClinGen Ensembl |
|
|
rs1381817162 CA381332929 |
341 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1168485557 CA381333015 |
343 | S>I | No |
ClinGen gnomAD |
|
|
rs138527502 CA6110010 |
344 | I>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA6110011 rs760475624 |
345 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs201590586 CA224014114 |
346 | D>A | No |
ClinGen Ensembl |
|
|
rs776591483 CA6110014 |
346 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776591483 CA6110013 |
346 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6110016 rs775065066 |
347 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA6110018 rs763824406 |
348 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751211264 CA6110019 |
348 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381333252 rs34891773 |
350 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6110021 rs200559028 |
350 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6110020 VAR_038522 rs34891773 |
350 | R>W | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1198789024 CA381333361 |
352 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
rs201029879 CA6110050 |
354 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6110052 rs775531547 COSM1676186 COSM1676185 |
355 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA6110051 rs769429872 |
355 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA381335443 rs1193195523 |
356 | L>Q | No |
ClinGen gnomAD |
|
|
CA6110054 rs768327540 |
356 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1427289950 CA381335457 |
357 | K>N | No |
ClinGen TOPMed |
|
|
rs776997076 CA6110055 |
358 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6110056 rs771444715 |
358 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs771444715 CA381335477 |
358 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761122345 CA6110059 |
362 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1585920 rs766623994 COSM930524 CA6110060 |
363 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA6110061 COSM1509691 rs367647379 COSM1509690 |
363 | R>H | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs148466876 CA6110063 |
364 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6110062 rs144712177 |
364 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs752782707 CA6110064 |
365 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381335735 rs1213468273 |
366 | Y>C | No |
ClinGen TOPMed |
|
|
CA381335724 rs1401972922 |
366 | Y>H | No |
ClinGen gnomAD |
|
|
rs1401972922 CA381335728 |
366 | Y>N | No |
ClinGen gnomAD |
|
|
CA381335769 rs758420383 |
367 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6110066 rs141734852 |
368 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs751695699 CA6110067 |
372 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA381335906 rs751695699 |
372 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs768707017 CA6110071 |
374 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA6110070 rs779689076 |
374 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6110069 rs779689076 |
374 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381336021 rs1353934256 |
375 | H>Y | No |
ClinGen gnomAD |
|
|
CA381336105 rs1239808814 |
376 | N>K | No |
ClinGen gnomAD |
|
|
CA6110072 rs778926185 |
376 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA6110073 rs747674843 |
377 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200099847 CA6110074 |
378 | S>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA381336232 rs1258863503 |
380 | P>L | No |
ClinGen gnomAD |
|
|
rs1422490042 CA381336256 |
381 | E>D | No |
ClinGen gnomAD |
|
|
rs772946881 CA6110075 |
381 | E>K | No |
ClinGen ExAC TOPMed |
|
|
CA6110076 rs760223907 |
382 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA224014593 rs962798879 |
386 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA6110078 rs776855811 |
387 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776855811 CA6110079 |
387 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs141867321 CA6110080 |
388 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6110081 rs115472389 RCV000956962 |
390 | N>H | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs764289570 CA224014657 |
393 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6110102 rs764289570 |
393 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1219339257 CA381336873 |
394 | I>T | No |
ClinGen gnomAD |
|
|
rs1302701027 CA381336936 |
396 | G>D | No |
ClinGen gnomAD |
|
| TCGA novel | 399 | V>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1261787216 CA381337031 |
399 | V>L | No |
ClinGen gnomAD |
|
|
rs767645382 CA6110105 |
400 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767645382 CA6110106 |
400 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754849594 CA6110107 |
401 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs765092249 CA6110108 |
401 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6110110 rs763891150 |
402 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381337189 rs763891150 |
402 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1269503375 CA381337278 |
404 | D>E | No |
ClinGen gnomAD |
|
|
rs777700069 CA6110111 |
405 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1479417856 CA381337369 |
407 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
CA6110114 rs75034975 |
410 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs373098979 CA6110115 |
413 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs770196208 CA6110116 |
413 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA6110118 rs749856963 |
415 | L>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6110117 rs775816905 |
415 | L>M | No |
ClinGen ExAC gnomAD |
|
|
rs1343176141 CA381337671 |
416 | T>A | No |
ClinGen gnomAD |
|
|
COSM3810092 rs1222364986 COSM3810091 CA381337681 |
416 | T>M | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs767593729 CA381337734 |
417 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767593729 CA6110122 |
417 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761819988 CA6110121 |
417 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA6110123 rs369437234 |
419 | L>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1304348694 CA381337825 |
420 | Q>R | No |
ClinGen gnomAD |
|
|
rs1565269135 CA381337910 |
421 | R>T | No |
ClinGen Ensembl |
|
|
rs1459647101 CA381337965 |
422 | L>R | No |
ClinGen TOPMed |
|
|
rs1490223314 CA381337977 |
423 | Y>H | No |
ClinGen gnomAD |
|
|
rs370602890 CA6110155 |
427 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs779313070 CA6110154 |
427 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs772712031 CA6110156 |
429 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201343332 CA6110157 |
429 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772712031 CA381338324 |
429 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6110158 rs747110425 |
430 | S>N | No |
ClinGen ExAC gnomAD |
|
|
COSM1356078 CA6110159 rs763130846 COSM1356077 |
431 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA6110160 rs61754785 |
431 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs759785707 CA6110161 |
432 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1555041589 CA6110163 |
433 | W>L | No |
ClinGen Ensembl |
|
|
rs1447973452 CA381338441 |
434 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA381338466 rs761443910 |
436 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6110166 rs761443910 |
436 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1202730563 CA381338486 |
437 | G>E | No |
ClinGen TOPMed |
|
|
CA6110167 rs200373867 |
439 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6110168 rs750308984 |
440 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224014870 rs906610246 |
441 | S>L | No |
ClinGen Ensembl |
|
|
rs760208146 CA6110169 |
442 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA381338623 rs760208146 |
442 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs765843176 CA6110170 |
444 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6110171 rs765843176 |
444 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754645666 CA6110172 |
445 | T>I | No |
ClinGen ExAC |
|
|
CA381338764 rs1252276554 |
448 | N>H | No |
ClinGen gnomAD |
|
|
CA381338797 rs1435673037 |
449 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA6110174 rs753119410 |
450 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs758788208 CA6110175 |
450 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA381338829 rs753119410 |
450 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1340891998 CA381338857 |
451 | C>S | No |
ClinGen TOPMed |
|
|
CA224014888 rs199989607 |
451 | C>W | No |
ClinGen Ensembl |
|
|
rs202095537 CA224014892 |
454 | L>F | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs1591061613 CA381339043 |
455 | T>P | No |
ClinGen Ensembl |
|
|
CA381339086 rs1369342485 |
456 | F>C | No |
ClinGen TOPMed |
|
|
rs747490735 CA6110177 |
457 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA224014899 rs367762559 |
457 | S>N | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1390979295 CA381339137 CA381339129 |
457 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA6110178 rs757463615 |
458 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA224014905 rs781322332 |
460 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6110179 rs781322332 |
460 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381339232 rs770056057 |
461 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770056057 CA381339233 |
461 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6110181 rs770056057 |
461 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 462 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381339267 rs1457417120 |
462 | G>E | No |
ClinGen Ensembl |
|
|
rs898487878 CA224014908 |
464 | I>V | No |
ClinGen TOPMed |
|
|
CA381339343 rs1227923831 |
465 | K>E | No |
ClinGen gnomAD |
|
|
CA224014911 rs958830007 |
465 | K>M | No |
ClinGen Ensembl |
|
|
rs747956072 CA6110184 |
466 | N>D | No |
ClinGen ExAC |
|
|
rs756095955 CA6110199 |
468 | A>T | No |
ClinGen ExAC gnomAD |
|
|
RCV000886294 rs34962862 CA6110200 |
470 | S>L | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1411108998 CA381339634 |
471 | V>M | No |
ClinGen TOPMed |
|
|
CA6110203 COSM1356083 COSM1356084 rs771900946 |
472 | R>* | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA6110202 rs771900946 |
472 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6110204 rs747015071 |
472 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770914783 CA6110205 |
474 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA381339766 rs1188866330 |
474 | V>M | No |
ClinGen gnomAD |
|
|
rs201571837 CA6110207 |
477 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381339828 rs1188642058 |
477 | R>W | No |
ClinGen gnomAD |
|
|
rs1361326996 CA381339969 |
480 | M>I | No |
ClinGen gnomAD |
|
|
CA6110209 rs775334423 |
480 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs762684304 CA6110210 |
481 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs762684304 CA6110211 |
481 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
VAR_025341 rs765593 CA224015047 |
481 | Q>H | No |
ClinGen UniProt Ensembl dbSNP |
|
|
CA224015048 rs987250871 |
482 | V>G | No |
ClinGen Ensembl |
|
|
rs1290610503 CA381340046 |
482 | V>L | No |
ClinGen gnomAD |
|
|
CA6110213 rs368415771 |
483 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1356085 rs768086876 COSM1356086 CA6110214 |
483 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA224015062 rs200398671 |
484 | G>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6110216 rs200398671 |
484 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA381340131 rs1422111258 |
485 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1313916547 CA381340111 |
485 | V>M | No |
ClinGen gnomAD |
|
|
rs779975020 CA6110217 |
487 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA224015076 rs915448877 |
491 | A>P | No |
ClinGen Ensembl |
|
|
CA381340451 rs1591062099 |
494 | V>G | No |
ClinGen Ensembl |
|
|
CA6110220 rs556719020 |
494 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1245288985 CA381340482 |
495 | D>G | No |
ClinGen gnomAD |
|
|
rs746829652 CA381340501 |
496 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs372789256 CA381340519 |
496 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6110222 rs372789256 |
496 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA224015103 rs980934607 |
498 | S>R | No |
ClinGen TOPMed |
|
|
CA381340572 rs1591062147 |
499 | T>P | No |
ClinGen Ensembl |
|
|
rs1381127788 CA381340660 |
501 | A>S | No |
ClinGen gnomAD |
|
|
rs781231190 CA6110223 |
502 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs1431321156 CA381341121 |
503 | L>F | No |
ClinGen gnomAD |
|
|
CA381341238 rs199586046 |
506 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs199586046 CA6110242 |
506 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA6110243 rs530353308 |
507 | Y>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA224015400 rs778290347 |
508 | D>N | No |
ClinGen Ensembl |
|
| TCGA novel | 509 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6110244 rs769626886 |
510 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs867792124 CA224015411 |
511 | A>V | No |
ClinGen Ensembl |
|
|
CA224015412 rs966811469 |
512 | T>I | No |
ClinGen Ensembl |
|
|
rs780085221 CA6110245 |
513 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224015426 rs978240151 |
516 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA6110247 rs768237489 |
516 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA6110248 rs774184394 |
517 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs773443435 CA6110251 |
521 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs1202779373 CA381342124 |
523 | I>N | No |
ClinGen TOPMed gnomAD |
|
|
rs147084358 CA6110252 |
524 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1201643175 CA381342261 |
526 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1479386637 COSM1676188 CA381342265 COSM1676187 |
527 | R>C | Variant assessed as Somatic; 0.0 impact. haematopoietic_and_lymphoid_tissue [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs376802866 CA6110254 |
527 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6110256 rs765280575 |
529 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs1328001410 CA381342710 |
530 | R>S | No |
ClinGen TOPMed |
|
|
CA224015562 rs113748912 |
531 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
CA224015559 rs1002466766 |
531 | N>S | No |
ClinGen TOPMed |
|
|
rs371206775 CA224015566 |
533 | G>E | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs766252036 CA6110281 |
534 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA6110282 rs753882035 |
535 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs754959356 CA6110283 |
537 | S>R | No |
ClinGen ExAC |
|
|
CA6110284 rs778841925 |
538 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6110285 rs747625070 |
538 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA224015583 rs1055158329 |
539 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA6110287 rs777330433 |
543 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA381343275 rs1591063437 |
544 | Y>S | No |
ClinGen Ensembl |
|
|
rs1158597316 CA381343327 |
545 | C>R | No |
ClinGen TOPMed gnomAD |
|
|
CA381343334 rs1185976667 |
545 | C>Y | No |
ClinGen TOPMed |
|
|
rs776978012 CA6110291 |
548 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs776978012 CA6110290 |
548 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs1454904780 CA381343584 |
552 | T>R | No |
ClinGen gnomAD |
No associated diseases with Q96NY9
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| endodeoxyribonuclease complex | A protein complex which is capable of endodeoxyribonuclease activity. |
| Holliday junction resolvase complex | An endodeoxyribonuclease complex that resolves the 4-way DNA intermediates of a Holliday junction into two separate duplex DNA molecules. Can be branch-migration associated. |
| nuclear replication fork | The Y-shaped region of a nuclear replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes. |
| nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| 3'-flap endonuclease activity | Catalysis of the cleavage of a 3' flap structure in DNA, but not other DNA structures; processes the 3' ends of Okazaki fragments in lagging strand DNA synthesis. |
| crossover junction endodeoxyribonuclease activity | Catalysis of the endonucleolytic cleavage at a junction such as a reciprocal single-stranded crossover between two homologous DNA duplexes (Holliday junction). |
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| metal ion binding | Binding to a metal ion. |
9 GO annotations of biological process
| Name | Definition |
|---|---|
| DNA catabolic process, endonucleolytic | The chemical reactions and pathways resulting in the breakdown of DNA, involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of deoxyribonucleotides. |
| DNA repair | The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway. |
| double-strand break repair | The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix. |
| double-strand break repair via break-induced replication | The error-free repair of a double-strand break in DNA in which the centromere-proximal end of a broken chromosome searches for a homologous region in an intact chromosome. DNA synthesis initiates from the 3' end of the invading DNA strand, using the intact chromosome as the template, and progresses to the end of the chromosome. |
| mitotic intra-S DNA damage checkpoint signaling | A mitotic cell cycle checkpoint that slows DNA synthesis in response to DNA damage by the prevention of new origin firing and the stabilization of slow replication fork progression. |
| osteoblast proliferation | The multiplication or reproduction of osteoblasts, resulting in the expansion of an osteoblast cell population. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone. |
| replication fork processing | The process in which a DNA replication fork that has stalled is restored to a functional state and replication is restarted. The stalling may be due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes. |
| resolution of meiotic recombination intermediates | The cleavage and rejoining of intermediates, such as Holliday junctions, formed during meiotic recombination to produce two intact molecules in which genetic material has been exchanged. |
| response to intra-S DNA damage checkpoint signaling | A process that occurs in response to signals generated as a result of intra-S DNA damage checkpoint signaling. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAAPVRLGRK | RPLPACPNPL | FVRWLTEWRD | EATRSRRRTR | FVFQKALRSL | RRYPLPLRSG |
| 70 | 80 | 90 | 100 | 110 | 120 |
| KEAKILQHFG | DGLCRMLDER | LQRHRTSGGD | HAPDSPSGEN | SPAPQGRLAE | VQDSSMPVPA |
| 130 | 140 | 150 | 160 | 170 | 180 |
| QPKAGGSGSY | WPARHSGARV | ILLVLYREHL | NPNGHHFLTK | EELLQRCAQK | SPRVAPGSAR |
| 190 | 200 | 210 | 220 | 230 | 240 |
| PWPALRSLLH | RNLVLRTHQP | ARYSLTPEGL | ELAQKLAESE | GLSLLNVGIG | PKEPPGEETA |
| 250 | 260 | 270 | 280 | 290 | 300 |
| VPGAASAELA | SEAGVQQQPL | ELRPGEYRVL | LCVDIGETRG | GGHRPELLRE | LQRLHVTHTV |
| 310 | 320 | 330 | 340 | 350 | 360 |
| RKLHVGDFVW | VAQETNPRDP | ANPGELVLDH | IVERKRLDDL | CSSIIDGRFR | EQKFRLKRCG |
| 370 | 380 | 390 | 400 | 410 | 420 |
| LERRVYLVEE | HGSVHNLSLP | ESTLLQAVTN | TQVIDGFFVK | RTADIKESAA | YLALLTRGLQ |
| 430 | 440 | 450 | 460 | 470 | 480 |
| RLYQGHTLRS | RPWGTPGNPE | SGAMTSPNPL | CSLLTFSDFN | AGAIKNKAQS | VREVFARQLM |
| 490 | 500 | 510 | 520 | 530 | 540 |
| QVRGVSGEKA | AALVDRYSTP | ASLLAAYDAC | ATPKEQETLL | STIKCGRLQR | NLGPALSRTL |
| 550 | |||||
| SQLYCSYGPL | T |