Q96KN7
Gene name |
RPGRIP1 |
Protein name |
X-linked retinitis pigmentosa GTPase regulator-interacting protein 1 |
Names |
RPGR-interacting protein 1 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:57096 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
2 structures for Q96KN7
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 4QAM | X-ray | 183 A | B | 1091-1286 | PDB |
| AF-Q96KN7-F1 | Predicted | AlphaFoldDB |
1199 variants for Q96KN7
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV001303141 rs1462796890 |
4 | L>M | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA7088532 RCV001079403 RCV000285535 rs201384449 RCV000345131 RCV000416234 |
17 | I>T | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA257489618 RCV001325647 rs1032222606 |
21 | P>S | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000598475 RCV001800820 RCV001800819 CA7088535 rs199590641 RCV001087237 |
25 | P>L | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001110244 RCV001110245 CA7088537 rs187598648 RCV001301099 |
26 | A>V | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs569126479 RCV001346407 CA388857073 |
27 | S>L | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP |
|
RCV001301904 rs763401090 |
29 | G>S | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs200510462 RCV001698989 RCV001110994 RCV000763911 RCV000175919 RCV001110995 CA241768 |
32 | M>K | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001371429 RCV001110996 CA7088570 RCV002556169 RCV001110997 rs376435824 |
39 | S>N | Cone-rod dystrophy 13 Inborn genetic diseases Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001058602 CA7088574 rs762187880 |
43 | R>Q | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
COSM1607475 RCV001110998 RCV001110999 CA7088571 rs751975588 RCV001856476 RCV003163259 |
43 | R>W | Cone-rod dystrophy 13 upper_aerodigestive_tract liver stomach Inborn genetic diseases Leber congenital amaurosis 6 [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA201680 RCV000175918 RCV001261169 COSM263433 RCV000724658 rs192003551 RCV001852161 |
52 | R>* | Cone-rod dystrophy 13 Cone-rod dystrophy 13 (cord13) Leber congenital amaurosis 6 (lca6) large_intestine Variant assessed as Somatic; 4.641e-05 impact. Leber congenital amaurosis 6 [ClinVar, Ensembl, Cosmic, NCI-TCGA] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000153849 CA234803 RCV001208275 RCV001800463 rs376250340 RCV001800464 |
54 | R>H | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA7088585 rs530008238 RCV001051418 COSM1368919 |
55 | E>K | Cone-rod dystrophy 13 Variant assessed as Somatic; 0.0 impact. large_intestine [ClinVar, NCI-TCGA, Cosmic] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs1413728875 RCV001042271 |
58 | M>T | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001332324 rs1880692860 |
64 | S>F | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000787885 CA117158 RCV000005271 rs137853124 |
65 | W>* | Leber congenital amaurosis 6 (lca6) Leber congenital amaurosis Leber congenital amaurosis 6 [Ensembl, ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1880693286 RCV001313597 |
68 | Q>R | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs62646879 CA227913 RCV001112991 RCV001081118 RCV000327868 RCV000086247 RCV001112992 |
86 | R>W | Cone-rod dystrophy 13 Leber congenital amaurosis 6 (lca6) Leber congenital amaurosis 6 [ClinVar, Ensembl] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1057519200 RCV001800664 RCV001800663 RCV001199770 RCV000415874 CA16043847 RCV001359271 |
90 | V>I | Cone-rod dystrophy 13 Cone dystrophy Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
CA227918 RCV000243444 rs1040904 RCV000346133 RCV000086250 RCV001522397 VAR_057772 RCV000401587 |
96 | P>Q | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA7088631 RCV002520891 RCV000370485 CA257494505 rs377018856 RCV000311166 |
104 | G>R | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs1424476051 RCV001318069 |
107 | A>missing | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs765387527 RCV001239643 CA7088633 |
110 | R>W | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1566671532 CA388858830 RCV001297032 |
112 | R>H | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001800389 rs375226924 RCV001800388 RCV000082003 CA223568 RCV001345967 |
126 | G>R | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001114355 CA257494544 RCV001114356 RCV001067802 rs547876047 |
129 | H>L | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001309896 rs766604917 CA7088653 |
143 | V>I | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA7088655 RCV001053134 rs755600406 |
146 | G>E | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1881013380 RCV001231591 |
153 | A>G | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs199840691 RCV001318777 CA7088678 |
165 | P>A | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001261170 rs61751265 RCV000086256 |
171 | Y>missing | Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001237909 rs1881077003 |
174 | P>missing | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001261171 rs780733881 |
174 | P>R | Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1881077815 RCV001316764 |
177 | F>L | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs186266220 RCV000322396 RCV000358467 RCV000276671 CA7088688 RCV000959229 |
181 | A>G | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000323616 rs6571751 RCV001511544 VAR_017830 CA227931 RCV000086258 RCV000254473 RCV000268509 |
192 | K>E | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001208316 rs763667727 |
207 | S>I | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA7088716 rs763667727 RCV001343647 |
207 | S>N | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001069072 rs1881122797 |
212 | M>I | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA7088719 RCV000288020 RCV000382936 rs767213505 |
214 | K>Q | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA7088724 RCV000983971 COSM3723424 RCV000384076 RCV000329549 rs371762530 |
220 | M>V | Cone-rod dystrophy 13 upper_aerodigestive_tract Leber congenital amaurosis 6 [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001335049 rs752263228 RCV000761349 RCV001074662 |
225 | H>missing | Cone-rod dystrophy 13 Retinal dystrophy Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001037555 CA7088742 rs780673799 RCV001800941 RCV001800942 RCV001759941 |
263 | A>S | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV002532181 rs554396590 CA7088743 RCV000678628 |
267 | R>* | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
RCV000989169 CA7088744 rs758239674 RCV001869358 |
267 | R>Q | Cone-rod dystrophy 13 Cone-rod dystrophy 13 (cord13) Leber congenital amaurosis 1 [ClinVar, Ensembl] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001086986 RCV001800533 RCV001002218 RCV000207372 rs372615343 CA071653 RCV001800534 RCV000384797 |
270 | I>V | Cone-rod dystrophy 13 Anophthalmia-microphthalmia syndrome Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000144469 rs587783018 CA170861 RCV001380810 |
278 | R>* | Cone-rod dystrophy 13 Cone-rod dystrophy 13 (cord13) Leber congenital amaurosis 6 [ClinVar, Ensembl] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs1881380174 RCV001041882 |
292 | M>V | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001005021 rs1594180177 |
299 | E>missing | Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA7088769 RCV002545105 RCV001322189 rs550626567 |
299 | E>K | Cone-rod dystrophy 13 Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs200168103 RCV001111082 CA7088783 RCV001111081 RCV001856477 |
303 | A>T | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs755322533 RCV000695148 RCV001113070 RCV001113071 CA7088832 |
313 | G>E | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001231575 rs778477037 CA7088836 |
319 | H>Q | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001312863 CA388862195 rs1214509629 |
322 | L>P | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs199982906 CA7088839 RCV001305367 RCV000408090 RCV002519178 RCV001800649 RCV001800650 |
323 | L>P | Cone-rod dystrophy 13 Inborn genetic diseases Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA7088843 rs776485302 RCV001229039 |
329 | L>V | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA7088848 RCV001212747 rs766519169 |
338 | K>E | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001204553 rs1881555303 |
340 | A>S | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002522297 CA7088853 RCV000295356 rs756365691 RCV000396734 RCV003137915 RCV001052349 |
353 | L>F | Cone-rod dystrophy 13 Inborn genetic diseases Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs774569329 RCV001227689 CA7088869 |
368 | E>G | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000171128 RCV001800395 rs61751266 RCV000786015 RCV000086238 RCV001047199 |
370 | E>missing | Cone-rod dystrophy 13 Leber congenital amaurosis Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001261191 RCV001238890 RCV000504638 rs776880045 |
372 | K>missing | Cone-rod dystrophy 13 Leber congenital amaurosis Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA612371636 rs1391335025 RCV001261178 |
378 | Y>* | Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs373962100 RCV001234243 CA7088902 |
391 | S>R | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs779216995 RCV001114455 COSM1368920 RCV002556240 CA7088907 RCV001114454 |
403 | A>V | Cone-rod dystrophy 13 large_intestine Leber congenital amaurosis 6 [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ExAC dbSNP gnomAD |
|
rs775425686 RCV001236080 CA7088909 |
407 | Q>* | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1052124836 RCV001305681 CA257535348 |
429 | L>R | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
VAR_067184 RCV000954352 rs190985984 CA7088925 |
432 | S>F | Cone-rod dystrophy 13 found in a patient with LCA6 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000225543 RCV001198056 rs878853392 CA10581688 |
435 | K>* | Retinal dystrophy Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1882224897 RCV001305052 |
440 | D>E | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001206122 rs1882228306 |
451 | K>T | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA10581689 rs878853391 RCV000225431 |
482 | L>* | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs368781265 CA7088968 RCV001389834 RCV001261179 |
483 | Q>* | Cone-rod dystrophy 13 Leber congenital amaurosis 6 (lca6) Leber congenital amaurosis 6 [ClinVar, Ensembl] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs1882245032 RCV001326329 |
486 | T>I | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA388865094 rs1161752701 RCV001302319 |
492 | E>G | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001217642 CA7088998 rs763392584 |
513 | A>S | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP |
|
COSM1477436 CA7089000 RCV001244385 rs763392584 |
513 | A>T | Cone-rod dystrophy 13 Variant assessed as Somatic; 0.0 impact. breast [ClinVar, NCI-TCGA, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP |
|
RCV001855187 COSM1264541 rs373592510 RCV000355578 CA10605735 |
530 | R>C | Cone-rod dystrophy 13 oesophagus [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ESP TOPMed dbSNP gnomAD |
|
RCV001380451 RCV002267761 RCV001267701 RCV001844254 rs1420750126 RCV001784543 |
539 | E>missing | Cone-rod dystrophy 13 Leber congenital amaurosis Cone-rod dystrophy Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000272533 rs10151259 RCV000005275 RCV001511545 RCV000086240 CA201070 RCV000989171 VAR_017831 RCV000174586 |
547 | A>S | Cone-rod dystrophy 13 Cone-rod dystrophy 13 (cord13) Leber congenital amaurosis 1 Leber congenital amaurosis 6 CORD13 [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001324862 rs1223339694 CA388865691 |
548 | D>N | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs373415938 CA7089044 RCV001208491 |
551 | N>S | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs776963292 RCV001261181 COSM1578758 CA257535773 RCV002537617 |
563 | R>* | Cone-rod dystrophy 13 Leber congenital amaurosis 6 (lca6) Variant assessed as Somatic; impact. meninges Leber congenital amaurosis 6 [ClinVar, Ensembl, NCI-TCGA, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA dbSNP gnomAD |
|
rs1448903303 RCV001060463 CA388865999 |
576 | E>K | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV002282101 rs147586703 VAR_065724 CA7089060 RCV001111169 RCV000325954 RCV001800646 RCV000763912 |
585 | P>S | Cone-rod dystrophy 13 Leber congenital amaurosis 6 (lca6) Leber congenital amaurosis 6 [ClinVar, Ensembl] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001111170 VAR_065725 rs34067949 RCV001111171 CA7089091 RCV001082360 RCV000761865 RCV000434906 |
589 | Q>H | Cone-rod dystrophy 13 Leber congenital amaurosis 6 does not affect the interaction with NPHP4 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001074230 rs1882854195 |
592 | D>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000578972 RCV001238568 RCV000779132 CA7089094 RCV001800794 rs775935766 |
598 | R>* | Cone-rod dystrophy 13 Cone-rod dystrophy 13 (cord13) RPGRIP1L-Related Disorders Leber congenital amaurosis 6 [ClinVar, Ensembl] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs74034910 RCV001083621 RCV000989172 RCV001111172 RCV001111173 VAR_065726 CA7089095 COSM263438 RCV000384176 RCV000224456 |
598 | R>Q | Cone-rod dystrophy 13 Leber congenital amaurosis 1 Leber congenital amaurosis 6 (lca6) large_intestine Leber congenital amaurosis 6 found in patients with primary open angle glaucoma and juvenile open angle glaucoma; affects the interaction with NPHP4 [ClinVar, Ensembl, Cosmic, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001228157 rs368192802 CA7089097 |
599 | P>L | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA7089100 rs3748360 VAR_017832 RCV001326077 |
601 | S>L | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
VAR_067185 rs3748360 RCV001202147 CA7089099 |
601 | S>W | Cone-rod dystrophy 13 found in a patient with LCA6 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001296100 rs781272475 |
601 | S>missing | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA7089108 RCV001325996 rs779121574 |
619 | S>F | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP |
|
rs1882869988 RCV001314788 |
626 | N>Y | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA170857 RCV000144462 rs535922252 |
631 | H>L | Cone-rod dystrophy 13 (cord13) Leber congenital amaurosis 6 [Ensembl, ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
| VAR_067186 | 631 | H>P | LCA6 [UniProt] | Yes | UniProt |
|
CA7089115 RCV001800938 RCV001800939 rs535922252 RCV001074229 RCV001034879 |
631 | H>R | Cone-rod dystrophy 13 Cone-rod dystrophy 13 (cord13) Retinal dystrophy Leber congenital amaurosis 6 [ClinVar, Ensembl] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
VAR_065728 RCV000276189 RCV001800644 CA7089119 RCV001800645 rs200325360 RCV001069833 |
635 | A>G | Cone-rod dystrophy 13 Leber congenital amaurosis 6 a patient with normal tension glaucoma and a patient with primary open angle glaucoma; affects the interaction with NPHP4 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
rs1454437229 RCV001075702 CA388867251 |
637 | L>V | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001364268 rs753575515 RCV000334887 RCV000279829 CA7089122 RCV002520892 |
641 | A>T | Cone-rod dystrophy 13 Variant assessed as Somatic; 0.0 impact. Inborn genetic diseases Leber congenital amaurosis 6 [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001345122 CA7089127 rs780101671 |
648 | T>N | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001319192 RCV001800729 RCV000521905 RCV001800728 CA388867426 rs1278572461 |
659 | Y>C | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001320041 rs1278572461 |
659 | Y>S | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs483352751 RCV002514537 CA229175 RCV000087236 |
660 | D>Y | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA7089135 rs767180524 RCV001326438 |
664 | H>R | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs878853390 RCV000225615 |
670 | V>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
CA388867574 RCV000989173 RCV001858701 rs1348186141 |
671 | G>E | Cone-rod dystrophy 13 Cone-rod dystrophy 13 (cord13) Leber congenital amaurosis 1 [ClinVar, Ensembl] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000701424 CA388867595 rs1566341956 |
673 | Q>* | Cone-rod dystrophy 13 Cone-rod dystrophy 13 (cord13) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001113174 CA7089145 rs543867152 RCV001113175 RCV001245884 |
688 | S>L | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001800510 CA240362 rs200401966 RCV000174787 RCV001800511 RCV001037544 |
692 | H>R | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs1882904268 RCV001261182 |
696 | E>* | Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1882945917 RCV001073673 |
744 | E>* | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001261183 rs61751268 RCV000086244 VAR_017833 CA227910 |
746 | G>E | Leber congenital amaurosis 6 (lca6) Variant assessed as Somatic; impact. Leber congenital amaurosis 6 LCA6 [Ensembl, NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl NCI-TCGA dbSNP |
|
rs1882946937 RCV001261184 |
747 | V>missing | Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001003209 rs1594214013 CA388868454 |
750 | Y>C | Retinitis pigmentosa [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA7089207 RCV001352196 RCV001800987 rs758652031 VAR_065730 RCV001376539 |
764 | A>V | Cone-rod dystrophy 13 Leber congenital amaurosis 6 does not affect the interaction with NPHP4 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs1413996964 RCV001309401 CA388868551 |
765 | C>Y | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs183607403 RCV001230192 CA7089211 |
766 | N>S | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001309797 TCGA novel rs1594214205 CA388868566 |
767 | K>T | Cone-rod dystrophy 13 Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar NCI-TCGA Ensembl dbSNP |
|
CA7089212 RCV001800848 RCV000686083 rs75459701 RCV000779133 RCV001800849 RCV000760501 |
768 | R>* | Cone-rod dystrophy 13 Cone-rod dystrophy 13 (cord13) RPGRIP1L-Related Disorders Leber congenital amaurosis 6 [ClinVar, Ensembl] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA7089213 RCV001232446 rs770870865 |
768 | R>Q | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs577932201 RCV002516255 RCV000225680 CA7089216 |
772 | Q>* | Cone-rod dystrophy 13 Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs1483742101 RCV001229727 |
777 | T>S | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1195674447 RCV001245768 CA388868640 |
779 | V>A | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs1050643789 CA257536088 RCV001337515 |
779 | V>L | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001321413 CA7089222 rs765878033 |
783 | R>W | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA170863 RCV000144470 rs587783019 |
786 | Q>* | Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1883030065 RCV001337914 |
798 | Q>E | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000504829 RCV002230986 rs565837539 RCV001215982 CA7089253 |
800 | E>K | Cone-rod dystrophy 13 Variant assessed as Somatic; 0.0 impact. Leber congenital amaurosis [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs1883031542 RCV001074723 |
802 | W>* | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000596058 CA7089255 VAR_065731 RCV000989174 RCV001110509 rs142796310 RCV000878023 RCV001110508 |
806 | T>I | Cone-rod dystrophy 13 Cone-rod dystrophy 13 (cord13) Leber congenital amaurosis 1 Leber congenital amaurosis 6 a patient with primary open angle glaucoma who also carries variant K-352 in MYOC; affects the interaction with NPHP4 [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA351612 RCV000207424 rs869025257 |
808 | C>W | Anophthalmia-microphthalmia syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001074193 rs1883036105 |
811 | L>F | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1883036406 RCV001199769 |
811 | L>H | Cone dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001110511 rs190490019 RCV001110510 RCV000878013 CA7089260 RCV001089439 |
812 | R>Q | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1739469293 RCV001073416 RCV001862500 |
814 | R>missing | Cone-rod dystrophy 13 Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs759940113 RCV000762921 RCV001724145 RCV000754600 COSM270068 RCV000710047 RCV001800862 CA7089262 |
814 | R>* | Cone-rod dystrophy 13 Variant assessed as Somatic; 0.0 impact. Leber congenital amaurosis 6 (lca6) large_intestine Leber congenital amaurosis Leber congenital amaurosis 6 [ClinVar, NCI-TCGA, Ensembl, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA dbSNP gnomAD |
|
rs372647080 CA257536131 RCV001110513 RCV001110512 VAR_065733 RCV001371960 |
814 | R>L | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar UniProt ESP TOPMed dbSNP gnomAD |
|
RCV001338666 rs764884763 CA7089266 |
817 | G>R | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000989175 rs751521888 CA257536134 RCV001869359 |
823 | Y>C | Cone-rod dystrophy 13 Cone-rod dystrophy 13 (cord13) Leber congenital amaurosis 1 [ClinVar, Ensembl] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001075703 RCV001800949 rs745741473 RCV001062863 RCV001800948 |
824 | A>missing | Cone-rod dystrophy 13 Retinal dystrophy Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001245479 rs985883884 CA257536135 |
827 | R>C | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs28937883 RCV001111268 RCV001110514 CA7089273 RCV002556163 |
827 | R>H | Cone-rod dystrophy 13 Cone-rod dystrophy 13 (cord13) Variant assessed as Somatic; 0.0 impact. Leber congenital amaurosis 6 [ClinVar, Ensembl, NCI-TCGA] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs28937883 RCV000086245 VAR_017834 RCV000005274 CA227911 |
827 | R>L | Cone-rod dystrophy 13 Cone-rod dystrophy 13 (cord13) CORD13 [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV001867943 CA7089278 rs749361825 RCV000592864 |
835 | D>G | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs771018578 RCV001038833 CA7089281 |
836 | T>N | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001348556 RCV001111270 RCV001111269 CA7089282 rs373515194 RCV002282458 VAR_065734 |
837 | A>G | Cone-rod dystrophy 13 Cone-rod dystrophy 13 (cord13) Leber congenital amaurosis 6 (lca6) Leber congenital amaurosis 6 a patient with primary open angle glaucoma and a patient with juvenile open angle glaucoma; affects the interaction with NPHP4 [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
VAR_065735 rs772480252 RCV002222660 RCV001038820 CA7089283 |
838 | I>V | Cone-rod dystrophy 13 a patient with normal tension glaucoma and a patient with primary open angle glaucoma; affects the interaction with NPHP4 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV001350669 CA7089290 rs762420632 |
843 | N>D | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001800828 CA388869332 rs1429786931 RCV001389835 RCV001261185 RCV000597545 RCV001074918 |
852 | R>* | Cone-rod dystrophy 13 Cone-rod dystrophy 13 (cord13) Leber congenital amaurosis 6 (lca6) Retinal dystrophy Leber congenital amaurosis 6 [ClinVar, Ensembl] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA223562 RCV001513784 rs181758389 RCV001111273 RCV001111274 VAR_065737 RCV001002311 RCV000082000 |
852 | R>Q | Cone-rod dystrophy 13 Cone-rod dystrophy 13 (cord13) Leber congenital amaurosis 6 (lca6) Leber congenital amaurosis 6 [ClinVar, Ensembl] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001298225 rs755901634 CA7089295 |
853 | F>V | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1555302200 RCV000626951 RCV001261186 |
857 | V>missing | Retinal dystrophy Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1883066106 RCV001315496 |
865 | L>P | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs375012807 RCV001231329 CA7089298 |
867 | R>Q | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs186803989 CA234805 RCV000153850 RCV000878567 |
867 | R>W | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000225501 rs878853389 RCV002292493 |
870 | L>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs747355604 RCV001232092 CA7089301 |
872 | I>V | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000274593 RCV002282118 rs573418252 RCV000364560 CA7089304 |
873 | H>R | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs1019416252 CA257536141 RCV001299258 |
878 | E>K | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001091752 rs1030149008 RCV001800880 RCV001800879 RCV000779134 CA257536142 |
888 | R>* | Cone-rod dystrophy 13 RPGRIP1L-Related Disorders Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001316219 RCV002556209 RCV001113275 RCV001113276 CA7089315 rs559905596 |
888 | R>Q | Cone-rod dystrophy 13 Inborn genetic diseases Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001211496 RCV000593385 rs184926375 CA7089316 RCV001800823 RCV001800824 |
889 | A>T | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA7089317 rs780587095 RCV000298896 RCV002518810 COSM954387 |
890 | R>* | Cone-rod dystrophy 13 Variant assessed as Somatic; 0.0 impact. endometrium [ClinVar, NCI-TCGA, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001217005 rs374913550 CA7089318 |
890 | R>Q | Cone-rod dystrophy 13 Variant assessed as Somatic; 0.0 impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000370259 COSM697549 RCV000310954 rs781608496 CA10639924 |
900 | E>D | lung Cone-rod dystrophy 13 Leber congenital amaurosis 6 [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000678627 rs776289402 RCV001075715 RCV001201958 RCV000995114 RCV001800846 |
907 | N>* | Cone-rod dystrophy 13 Retinal dystrophy Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000989176 RCV001858702 rs61751270 RCV002225121 |
920 | Q>missing | Cone-rod dystrophy 13 Leber congenital amaurosis 1 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001800387 RCV000710048 RCV001857395 RCV001800386 rs398124354 CA223564 RCV000082001 |
925 | W>* | Cone-rod dystrophy 13 Cone-rod dystrophy 13 (cord13) Leber congenital amaurosis Leber congenital amaurosis 6 [ClinVar, Ensembl] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001212958 rs1883254940 |
929 | Y>missing | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001074916 CA7089349 rs773491339 RCV001862580 |
932 | P>A | Cone-rod dystrophy 13 Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001312597 CA388870787 rs1437116017 |
955 | S>F | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs199589566 CA7089358 RCV001294402 |
957 | E>K | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs786205623 RCV000171475 RCV001261172 |
959 | K>missing | Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA7089360 RCV001113279 VAR_057773 RCV000641903 RCV001114650 rs35810926 |
960 | A>P | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs35810926 CA388870817 RCV001114651 RCV001114652 |
960 | A>S | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001261187 RCV000505086 rs1555302710 |
964 | S>missing | Retinitis pigmentosa Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1233085262 CA388870913 RCV001349020 |
972 | E>D | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV000275925 RCV000317052 rs886050399 CA10645003 |
975 | I>T | Cone-rod dystrophy 13 Variant assessed as Somatic; 0.0 impact. Leber congenital amaurosis 6 [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001057785 rs1883345867 |
977 | A>V | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001237099 CA7089379 rs754582695 |
978 | G>S | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1371805993 RCV001003210 CA388870957 RCV001862727 |
979 | Q>* | Cone-rod dystrophy 13 Cone-rod dystrophy 13 (cord13) Retinitis pigmentosa Variant assessed as Somatic; impact. [ClinVar, Ensembl, NCI-TCGA] | Yes |
ClinGen ClinVar NCI-TCGA TOPMed dbSNP |
|
rs780667159 CA7089380 RCV001382205 RCV000989177 RCV001261192 RCV000504726 RCV001800715 COSM1629238 |
981 | R>* | Cone-rod dystrophy 13 Leber congenital amaurosis 1 liver Leber congenital amaurosis 6 (lca6) Leber congenital amaurosis Leber congenital amaurosis 6 [ClinVar, Cosmic, Ensembl] | Yes |
ClinGen cosmic curated ClinVar ExAC dbSNP gnomAD |
|
rs1349740244 CA388871090 RCV001325890 |
989 | G>V | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001003211 rs1594224781 RCV001385916 |
992 | R>missing | Cone-rod dystrophy 13 Retinitis pigmentosa [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1883354997 RCV001241227 |
998 | Q>R | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001344137 CA7089392 rs377551155 |
1008 | G>R | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA257536364 RCV001340805 rs969637624 |
1010 | R>I | Cone-rod dystrophy 13 Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000371567 RCV000262975 rs886050400 CA10643901 |
1019 | M>L | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA7089404 rs367899074 RCV000318829 RCV000378099 RCV001298333 |
1022 | L>F | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA7089408 RCV000343428 rs3748361 RCV000283678 VAR_017835 RCV001518177 RCV001610714 RCV000248391 |
1033 | E>Q | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000504916 rs1555303320 CA388872113 |
1040 | W>* | Leber congenital amaurosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001337413 rs1883600054 |
1046 | N>I | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1883601117 RCV001345702 |
1047 | S>I | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001345297 rs1883602777 |
1051 | D>H | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001211141 RCV001109017 CA7089445 RCV001109016 rs372226099 |
1074 | P>R | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001241029 rs550094754 CA7089446 |
1075 | L>V | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA388872361 RCV001302823 rs1396404319 |
1076 | H>R | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs751421999 RCV001324886 CA388873052 |
1083 | S>F | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001306261 CA7089473 rs576011830 |
1084 | S>F | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs769264626 CA7089485 RCV001208315 |
1106 | M>T | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA117160 RCV000835646 VAR_017836 rs17103671 RCV001083379 RCV000005276 RCV000176224 COSM3736095 |
1114 | D>G | Cone-rod dystrophy 13 Leber congenital amaurosis 6 (lca6) skin Leber congenital amaurosis 6 LCA6; no effect on interaction with RPGR [ClinVar, Ensembl, Cosmic, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA7089506 RCV002265931 rs137853911 RCV001038290 |
1120 | I>L | Cone-rod dystrophy 13 Cone-rod dystrophy 13 (cord13) Leber congenital amaurosis 6 (lca6) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000086972 RCV001059148 RCV001111368 CA228928 RCV002281926 rs137853911 RCV001111369 |
1120 | I>V | Cone-rod dystrophy 13 Cone-rod dystrophy 13 (cord13) Leber congenital amaurosis 6 (lca6) Leber congenital amaurosis 6 [ClinVar, Ensembl] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA388856802 RCV001041910 rs1363679912 |
1122 | I>V | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001352198 RCV001800513 rs760334377 RCV000176225 RCV001800512 CA242092 |
1126 | A>V | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001248202 rs774522001 |
1134 | M>I | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1566366002 RCV000779135 |
1136 | D>missing | RPGRIP1L-Related Disorders [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001261189 rs1885186332 |
1143 | Y>missing | Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA7089512 RCV001325481 rs765299022 |
1143 | Y>C | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001205864 RCV000394696 RCV000309679 CA10634712 rs886050401 |
1148 | F>L | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs527354795 RCV001320475 CA257547050 CA388857144 |
1150 | D>E | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen 1000Genomes ExAC TOPMed gnomAD ClinVar dbSNP |
|
CA7089517 rs144704092 RCV001213456 RCV003163623 |
1150 | D>N | Cone-rod dystrophy 13 Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001209967 rs1388726376 CA388857150 |
1152 | P>S | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV001862736 CA7089522 RCV001252813 rs188312873 |
1154 | S>L | Cone-rod dystrophy 13 Microcephaly [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA7089521 RCV001042308 rs188312873 |
1154 | S>W | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000625855 rs776698746 |
1156 | T>* | Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001238762 rs1885194108 |
1163 | R>missing | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1566366242 RCV000779136 |
1167 | A>missing | RPGRIP1L-Related Disorders [ClinVar] | Yes |
ClinVar dbSNP |
|
CA7089528 RCV002521913 RCV001800647 RCV001800648 rs201191634 RCV000324578 RCV001058094 |
1169 | E>Q | Cone-rod dystrophy 13 Inborn genetic diseases Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV003169711 CA7089529 RCV001348447 rs202036914 |
1171 | I>T | Cone-rod dystrophy 13 Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA388857474 RCV001869420 RCV001000640 rs766353935 |
1185 | E>K | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs766353935 CA7089549 RCV001303220 |
1185 | E>Q | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001262111 rs587783012 RCV000144463 |
1189 | R>missing | Leber congenital amaurosis Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001800668 RCV001261193 rs752175052 CA7089550 RCV000428349 RCV001387165 |
1189 | R>* | Cone-rod dystrophy 13 Leber congenital amaurosis 6 (lca6) Leber congenital amaurosis 6 [ClinVar, Ensembl] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA7089554 RCV001220517 rs756503753 RCV001113376 RCV001113377 |
1190 | R>S | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA7089555 rs188660364 RCV001488401 RCV001113379 RCV001113378 |
1191 | R>W | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA7089563 rs769554584 RCV001340604 |
1196 | M>K | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA388857578 rs773540240 RCV001320514 |
1201 | D>G | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV002225287 RCV000086252 rs61751271 |
1204 | Q>missing | Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001261177 rs1885757549 |
1211 | V>missing | Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_076823 | 1211 | V>E | LCA6 [UniProt] | Yes | UniProt |
|
rs1295657393 CA388858001 RCV002535101 RCV000728998 |
1215 | P>L | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA10606895 RCV000327052 rs886044548 RCV002519346 |
1217 | D>N | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001003212 rs1594280914 |
1221 | K>missing | Retinitis pigmentosa [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1885763952 RCV001261190 |
1227 | G>R | Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000315506 CA7089589 RCV000559934 RCV000756603 rs34725281 RCV001683259 RCV000369993 VAR_057774 |
1240 | G>E | Cone-rod dystrophy 13 Leber congenital amaurosis 6 (lca6) Leber congenital amaurosis 6 [ClinVar, Ensembl] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001862890 RCV001114755 RCV001114754 CA7089613 rs370728861 |
1254 | E>K | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs1405508889 RCV000641900 CA388858285 |
1256 | L>V | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001207245 rs752222755 |
1260 | I>K | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs752222755 RCV001856508 RCV001114756 RCV001114757 CA7089617 |
1260 | I>T | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001114758 RCV001114759 CA388858323 rs1216759071 |
1263 | L>M | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs1468976582 RCV001005015 RCV001860574 |
1265 | V>missing | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001211874 RCV002520893 RCV000265246 rs778860397 RCV000357409 CA10645005 |
1272 | V>I | Cone-rod dystrophy 13 Inborn genetic diseases Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs768759217 RCV001315055 CA7089626 |
1278 | K>E | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP |
|
RCV000086255 RCV002265604 RCV001305369 RCV002225082 rs281865293 |
1279 | E>missing | Cone-rod dystrophy 13 Leber congenital amaurosis 6 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001954982 rs1029178575 CA257553680 |
1287 | S>R | Cone-rod dystrophy 13 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs1411362635 CA388856786 |
3 | H>Q | No |
ClinGen TOPMed |
|
|
CA388856789 rs1462796890 |
4 | L>V | No |
ClinGen gnomAD |
|
|
rs1231473915 CA388856826 |
7 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1231473915 CA388856828 |
7 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA388856824 rs1231473915 |
7 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA7088529 rs756665749 |
10 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs557304034 CA388856870 |
11 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs557304034 CA257489596 |
11 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1240709611 CA388856898 |
12 | L>F | No |
ClinGen gnomAD |
|
|
rs201905955 CA257489607 |
13 | P>S | No |
ClinGen 1000Genomes |
|
|
CA7088531 rs370068336 |
17 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs775399583 CA7088533 |
18 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1399409128 CA388856965 |
18 | D>N | No |
ClinGen gnomAD |
|
|
CA7088534 rs182920176 |
19 | A>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs956599165 CA257489620 |
21 | P>L | No |
ClinGen TOPMed |
|
|
CA388857026 rs1357697375 |
23 | V>L | No |
ClinGen TOPMed |
|
|
rs776628777 CA7088536 |
26 | A>T | No |
ClinGen ExAC |
|
|
rs569126479 TCGA novel CA7088538 |
27 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC TOPMed NCI-TCGA |
|
CA257489633 rs774530575 |
28 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA7088539 rs774530575 |
28 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388857089 rs763401090 |
29 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763401090 CA7088540 |
29 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1046296429 CA257492028 |
31 | N>D | No |
ClinGen Ensembl |
|
| VAR_065720 | 32 | M>L | No | UniProt | |
|
CA7088564 rs753553043 |
34 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs761540112 CA7088565 |
35 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA7088566 rs189509077 |
36 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA257492035 rs189509077 |
36 | P>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs749943816 CA7088567 |
37 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388857679 COSM552582 rs749943816 |
37 | P>L | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs751975588 CA388857718 |
43 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7088573 rs762187880 RCV000593876 |
43 | R>P | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA7088576 rs371044065 |
46 | L>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs774956493 CA7088578 |
49 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1328095086 CA388857775 |
51 | F>V | No |
ClinGen gnomAD |
|
|
rs374171080 CA7088581 |
52 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs374171080 CA7088580 COSM954369 |
52 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA7088582 rs764967308 |
53 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1476752302 COSM954370 CA388857790 |
54 | R>C | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs376250340 CA7088583 |
54 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA388857796 rs1566668538 |
55 | E>D | No |
ClinGen Ensembl |
|
|
rs754849037 CA7088586 |
55 | E>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA7088587 rs781081217 |
57 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs1413728875 CA388857816 |
58 | M>K | No |
ClinGen TOPMed |
|
|
rs1466878228 CA388857834 |
60 | V>G | No |
ClinGen gnomAD |
|
|
rs1192734148 CA388857839 |
61 | K>R | No |
ClinGen gnomAD |
|
|
CA257492060 rs976713441 |
62 | E>K | No |
ClinGen Ensembl |
|
|
rs752476122 CA7088588 |
62 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA388857849 rs755845899 |
63 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs755845899 CA7088589 |
63 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs62646878 RCV000086243 CA227909 |
65 | W>* | No |
ClinGen ClinVar TOPMed dbSNP |
|
| TCGA novel | 65 | W>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 68 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA388857896 rs1214003738 |
69 | D>V | No |
ClinGen TOPMed |
|
|
CA388858419 rs1475166710 |
75 | R>K | No |
ClinGen TOPMed |
|
|
CA7088615 rs754112261 |
77 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1594173026 CA388858442 |
77 | T>P | No |
ClinGen Ensembl |
|
|
CA7088616 rs757394399 |
78 | L>S | No |
ClinGen ExAC gnomAD |
|
|
rs1032395476 CA388858488 |
80 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1032395476 CA257494472 |
80 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA7088617 rs371371555 |
82 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1594173050 CA388858513 |
82 | T>P | No |
ClinGen Ensembl |
|
|
CA7088619 rs758442540 |
83 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA388858559 rs1594173071 |
85 | G>D | No |
ClinGen Ensembl |
|
|
rs1255481934 CA388858562 |
86 | R>P | No |
ClinGen gnomAD |
|
|
rs777112076 CA7088622 |
89 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs530125171 CA7088623 |
89 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1311665698 CA388858595 |
92 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1375387334 CA388858602 |
93 | E>A | No |
ClinGen gnomAD |
|
| TCGA novel | 95 | A>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7088625 rs1040904 |
96 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA388858634 rs1337129272 |
98 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1337129272 CA388858633 |
98 | S>W | No |
ClinGen TOPMed gnomAD |
|
|
rs767015112 CA388858640 |
99 | E>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 99 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs767015112 CA7088627 |
99 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA388858637 rs1436942223 |
99 | E>Q | No |
ClinGen TOPMed |
|
|
rs372777128 CA7088628 |
101 | A>T | No |
ClinGen ESP ExAC gnomAD |
|
|
CA388858689 rs760586281 |
102 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7088632 rs757561293 |
104 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA388858754 rs1429001401 |
107 | A>T | No |
ClinGen gnomAD |
|
|
rs1252806078 CA388858767 |
108 | G>R | No |
ClinGen gnomAD |
|
|
CA257494511 rs946644212 |
109 | W>R | No |
ClinGen Ensembl |
|
|
rs750589032 CA7088634 |
110 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA388858839 rs1429217156 |
113 | L>V | No |
ClinGen TOPMed |
|
|
CA388858853 rs1192070874 |
114 | S>P | No |
ClinGen TOPMed |
|
|
CA388858873 rs1462979257 |
115 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
CA7088637 rs752159774 |
115 | M>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780230712 CA7088636 |
115 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs539334802 CA7088638 |
117 | Q>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs781732396 CA7088639 |
117 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA7088640 rs369530487 |
118 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs770129842 CA7088641 |
119 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1442770059 CA388858950 |
120 | Q>R | No |
ClinGen gnomAD |
|
|
CA388858965 rs1349413376 |
121 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
CA7088643 rs745477543 |
121 | M>R | No |
ClinGen ExAC |
|
|
rs771533434 CA7088644 |
122 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs1234439954 CA388858996 |
123 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA257494532 rs867200920 |
125 | Q>* | No |
ClinGen Ensembl |
|
|
CA388859046 rs1253136691 |
126 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA7088646 rs768572446 |
127 | H>N | No |
ClinGen ExAC |
|
|
CA388859094 rs547876047 |
129 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA388859117 rs1470016879 |
130 | C>* | No |
ClinGen gnomAD |
|
|
CA388859123 rs1217633462 |
131 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs776488741 CA7088648 |
134 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1267163203 CA388859178 |
135 | S>G | No |
ClinGen TOPMed gnomAD |
|
| VAR_065721 | 135 | S>R | No | UniProt | |
|
CA388859208 rs1401332285 |
137 | R>H | No |
ClinGen TOPMed |
|
|
rs761513451 CA7088650 |
138 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs761513451 CA7088649 |
138 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA388859215 rs763210717 |
139 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388859216 rs763210717 |
139 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7088652 rs763210717 |
139 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1169371081 CA388859219 |
139 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA388859233 rs1242497761 |
141 | P>L | No |
ClinGen gnomAD |
|
|
rs1442705881 CA388859236 |
142 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1382706986 CA388859256 |
145 | V>E | No |
ClinGen TOPMed gnomAD |
|
|
CA388859273 rs1324633537 |
148 | R>* | No |
ClinGen gnomAD |
|
|
rs1324633537 CA388859272 |
148 | R>G | No |
ClinGen gnomAD |
|
|
CA257494557 rs11628996 |
148 | R>K | No |
ClinGen Ensembl |
|
|
CA7088657 rs372471202 |
152 | T>A | No |
ClinGen ESP ExAC gnomAD |
|
|
rs778179468 CA7088659 |
154 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA257494565 rs866277722 |
156 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA257494564 rs866277722 |
156 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA388859327 rs1188669647 |
157 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs368528161 CA257494569 |
158 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368528161 CA388859335 |
158 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368528161 CA7088662 |
158 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388859368 rs1462681063 |
163 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA388859369 rs1462681063 |
163 | R>T | No |
ClinGen TOPMed gnomAD |
|
|
rs757555537 CA7088679 |
168 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs575192944 CA7088680 |
170 | S>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1316593326 CA388859980 |
171 | Y>F | No |
ClinGen TOPMed |
|
|
CA388860008 rs1305296500 |
173 | A>D | No |
ClinGen gnomAD |
|
|
rs1305296500 CA388860010 |
173 | A>G | No |
ClinGen gnomAD |
|
|
rs1225739735 CA388860002 |
173 | A>T | No |
ClinGen gnomAD |
|
|
CA7088683 rs780733881 |
174 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388860043 rs1235485832 |
175 | P>L | No |
ClinGen gnomAD |
|
|
CA257494821 rs1011857075 |
176 | S>L | No |
ClinGen Ensembl |
|
|
CA7088685 rs772938351 |
177 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs1555365397 CA7088686 |
178 | K>M | No |
ClinGen Ensembl |
|
|
CA388860113 rs1299683930 |
179 | E>D | No |
ClinGen TOPMed |
|
|
rs1236436283 CA388860098 |
179 | E>K | No |
ClinGen gnomAD |
|
|
rs1480746906 CA388860126 |
180 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA7088689 COSM273611 rs186266220 |
181 | A>V | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1594174669 CA388860158 |
182 | T>K | No |
ClinGen Ensembl |
|
|
rs1438783509 CA388860165 |
183 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
rs900955113 CA257494828 |
183 | N>K | No |
ClinGen TOPMed |
|
|
CA7088691 rs759808929 |
183 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA388860189 rs1412730253 |
184 | E>G | No |
ClinGen gnomAD |
|
|
rs1396765835 CA388860179 |
184 | E>K | No |
ClinGen gnomAD |
|
| TCGA novel | 186 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA388860247 rs1169939054 |
187 | G>V | No |
ClinGen TOPMed |
|
|
rs1194266063 CA388860257 |
188 | E>A | No |
ClinGen gnomAD |
|
|
CA388860279 rs1329481007 |
189 | V>A | No |
ClinGen gnomAD |
|
|
CA388860271 rs200219549 |
189 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7088693 rs200219549 |
189 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs370751257 CA7088694 |
190 | A>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs758926176 CA257494833 |
191 | S>G | No |
ClinGen TOPMed |
|
|
rs758926176 CA388860296 |
191 | S>R | No |
ClinGen TOPMed |
|
|
CA388860340 rs1306129454 |
193 | P>S | No |
ClinGen gnomAD |
|
|
rs757653708 CA7088696 |
194 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388860382 rs1219215628 |
195 | E>G | No |
ClinGen gnomAD |
|
|
CA388860450 rs1316901387 |
197 | V>F | No |
ClinGen gnomAD |
|
|
rs777149627 CA7088713 |
199 | G>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 203 | I>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA388860491 rs1197922295 |
203 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA388860496 rs1242582687 |
204 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1423078039 CA388860526 |
208 | S>T | No |
ClinGen gnomAD |
|
|
rs1167281957 CA388860546 |
211 | S>N | No |
ClinGen gnomAD |
|
|
rs1167281957 CA388860547 |
211 | S>T | No |
ClinGen gnomAD |
|
|
CA7088718 rs759245543 |
212 | M>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 213 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA388860574 rs1417081474 |
215 | P>A | No |
ClinGen TOPMed |
|
|
rs1347428806 CA388860581 |
216 | I>T | No |
ClinGen gnomAD |
|
|
rs752225657 CA7088720 |
216 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs777125547 CA7088722 |
219 | C>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777125547 CA7088723 |
219 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388860606 rs1345218064 |
220 | M>I | No |
ClinGen TOPMed |
|
|
CA388860624 rs1285531904 |
223 | S>G | No |
ClinGen gnomAD |
|
| TCGA novel | 223 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs376060001 CA257494954 |
224 | A>D | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs376060001 CA257494956 |
224 | A>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
RCV001091751 rs1881125294 |
226 | I>missing | No |
ClinVar dbSNP |
|
|
CA7088729 rs780349929 |
227 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA7088728 rs371994477 |
227 | M>T | No |
ClinGen ESP ExAC gnomAD |
|
|
rs756504836 CA7088730 |
228 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768832924 CA7088731 |
229 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs1476095586 CA388860682 |
231 | T>N | No |
ClinGen TOPMed |
|
|
CA388860689 rs1366893342 |
232 | M>I | No |
ClinGen gnomAD |
|
|
rs1261268977 CA388860686 |
232 | M>K | No |
ClinGen TOPMed |
|
|
rs1051866552 CA257494964 |
233 | Q>E | No |
ClinGen TOPMed |
|
|
rs1472613406 CA388860694 |
233 | Q>P | No |
ClinGen gnomAD |
|
|
rs776664766 CA7088732 |
234 | V>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 235 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 236 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7088736 rs763380102 |
238 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs766603726 CA7088737 |
243 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA7088738 rs752442850 |
247 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs760211909 CA7088739 |
248 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs1486327132 CA388860799 |
248 | D>V | No |
ClinGen TOPMed |
|
|
rs1262507960 CA388860817 |
250 | N>S | No |
ClinGen TOPMed |
|
|
rs1219466588 CA388860823 |
251 | F>C | No |
ClinGen TOPMed |
|
|
CA257494970 rs890656280 |
251 | F>V | No |
ClinGen Ensembl |
|
|
rs763761321 CA7088740 |
253 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs1355502292 CA388860838 |
253 | Q>R | No |
ClinGen gnomAD |
|
|
rs1237704081 CA388860842 |
254 | R>G | No |
ClinGen gnomAD |
|
|
rs1334760881 CA388860847 |
254 | R>S | No |
ClinGen TOPMed |
|
| TCGA novel | 265 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA388861383 rs764678956 |
268 | A>D | No |
ClinGen gnomAD |
|
|
CA257496694 rs764678956 |
268 | A>G | No |
ClinGen gnomAD |
|
|
rs372615343 CA388861400 |
270 | I>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs559714244 CA257496701 |
270 | I>M | No |
ClinGen Ensembl |
|
|
CA388861409 rs1388303568 |
271 | K>* | No |
ClinGen gnomAD |
|
|
rs927347968 CA257496707 |
274 | V>G | No |
ClinGen Ensembl |
|
|
CA257496704 rs981833605 |
274 | V>I | No |
ClinGen gnomAD |
|
|
rs1330472538 CA388861478 |
276 | L>V | No |
ClinGen gnomAD |
|
| TCGA novel | 278 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs766267049 CA7088763 |
278 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388861508 rs1198319376 |
279 | L>F | No |
ClinGen gnomAD |
|
|
CA7088765 rs754745915 |
280 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1208451312 CA388861527 TCGA novel |
280 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen gnomAD NCI-TCGA |
|
CA257496720 rs868288981 |
281 | K>N | No |
ClinGen Ensembl |
|
|
CA7088766 rs781398129 |
282 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs781398129 CA388861547 |
282 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs756235422 CA7088768 |
283 | L>S | No |
ClinGen ExAC gnomAD |
|
|
CA388861570 rs1257064270 |
284 | H>D | No |
ClinGen TOPMed |
|
| TCGA novel | 284 | H>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA257496741 rs558608708 |
284 | H>R | No |
ClinGen gnomAD |
|
|
CA257496744 rs937927408 |
287 | N>S | No |
ClinGen gnomAD |
|
|
CA257496762 rs866100721 |
288 | A>S | No |
ClinGen Ensembl |
|
|
rs1459207230 CA388861654 |
290 | L>F | No |
ClinGen gnomAD |
|
|
rs1291601634 CA388861682 |
292 | M>I | No |
ClinGen gnomAD |
|
|
CA388861687 rs1389892771 |
293 | T>A | No |
ClinGen gnomAD |
|
|
CA388861716 rs1280159593 |
295 | A>V | No |
ClinGen gnomAD |
|
|
CA7088770 rs749872365 |
300 | V>L | No |
ClinGen ExAC |
|
|
CA388861756 rs1217983404 |
301 | Q>K | No |
ClinGen TOPMed |
|
|
CA7088784 rs754799432 |
303 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA388862069 rs568372341 |
304 | Y>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1432612609 CA388862075 |
305 | E>D | No |
ClinGen TOPMed |
|
|
CA7088787 rs756323674 |
305 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA7088786 rs752956324 |
305 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388862076 rs1394319617 |
306 | T>P | No |
ClinGen TOPMed |
|
|
rs749340109 CA7088789 |
307 | L>* | No |
ClinGen ExAC gnomAD |
|
|
rs1302420835 CA388862100 |
309 | Q>H | No |
ClinGen gnomAD |
|
|
CA7088790 rs757291015 |
309 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388862125 rs1412685379 |
311 | N>K | No |
ClinGen TOPMed |
|
|
CA388862127 rs1378254850 |
312 | Q>K | No |
ClinGen TOPMed |
|
|
rs1412158843 CA388862131 |
312 | Q>R | No |
ClinGen gnomAD |
|
|
CA388862135 rs1371804929 |
313 | G>R | No |
ClinGen gnomAD |
|
|
rs1167931355 CA388862150 |
315 | L>P | No |
ClinGen gnomAD |
|
|
CA7088834 rs748959859 |
316 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA388862166 rs1295856534 |
318 | A>S | No |
ClinGen gnomAD |
|
|
CA388862167 rs1295856534 |
318 | A>T | No |
ClinGen gnomAD |
|
|
CA388862170 VAR_065722 rs1325466987 |
318 | A>V | a patient with primary open angle glaucoma [UniProt] | No |
ClinGen UniProt TOPMed dbSNP gnomAD |
|
rs1166653520 CA388862172 |
319 | H>D | No |
ClinGen Ensembl |
|
|
CA388862174 rs756920414 |
319 | H>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756920414 CA7088835 |
319 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388862184 rs745385433 |
320 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388862191 rs1355813994 |
322 | L>F | No |
ClinGen gnomAD |
|
|
rs541327555 CA7088841 |
327 | N>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs768371536 CA7088842 |
327 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA388862248 rs1418463154 |
330 | R>S | No |
ClinGen gnomAD |
|
|
CA7088845 rs765512694 |
331 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA388862297 rs1335721755 |
337 | S>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1451596643 CA388862308 |
339 | K>E | No |
ClinGen gnomAD |
|
|
CA388862320 rs1309771497 |
340 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA7088849 rs372002940 |
341 | V>A | No |
ClinGen ESP ExAC gnomAD |
|
|
rs372002940 CA257501281 |
341 | V>E | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1269936633 CA388862321 |
341 | V>M | No |
ClinGen TOPMed |
|
|
CA388862330 rs1237948707 |
342 | S>I | No |
ClinGen gnomAD |
|
|
CA257501293 COSM416249 rs913020687 |
343 | L>F | Variant assessed as Somatic; impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs1594184278 CA388862336 |
343 | L>S | No |
ClinGen Ensembl |
|
|
CA257501294 rs374092592 |
347 | L>P | No |
ClinGen TOPMed |
|
|
rs374092592 CA388862366 |
347 | L>R | No |
ClinGen TOPMed |
|
|
CA7088851 rs767828631 |
348 | E>G | No |
ClinGen ExAC gnomAD |
|
|
COSM1300480 rs1345736757 CA388862374 |
349 | D>N | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA388862385 rs1347198832 |
350 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
rs753119341 CA7088852 |
352 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1566676739 CA388862414 |
355 | M>L | No |
ClinGen Ensembl |
|
|
rs1397567635 CA388862427 |
356 | T>S | No |
ClinGen TOPMed |
|
|
CA388862710 rs1473434491 |
362 | E>G | No |
ClinGen TOPMed |
|
| VAR_065723 | 363 | R>T | a patient with normal tension glaucoma [UniProt] | No | UniProt |
|
rs763245499 CA7088867 |
364 | V>D | No |
ClinGen ExAC gnomAD |
|
|
rs766608701 CA7088868 |
367 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs759474031 CA7088870 |
369 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768072609 CA7088871 |
370 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7088872 rs375859404 |
371 | R>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7088873 rs980350108 |
371 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs867552844 CA257501656 |
373 | L>F | No |
ClinGen Ensembl |
|
|
rs1354887203 CA388862869 |
376 | D>G | No |
ClinGen TOPMed |
|
|
rs750114619 CA7088877 |
377 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA7088878 rs758038121 |
379 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs779600963 CA7088880 |
381 | L>H | No |
ClinGen ExAC gnomAD |
|
|
CA388863800 rs1284509955 |
385 | M>V | No |
ClinGen gnomAD |
|
|
CA388863823 rs1256186554 |
387 | D>Y | No |
ClinGen gnomAD |
|
|
CA7088900 rs780545638 |
388 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1201518060 CA388863840 COSM1726587 |
388 | S>N | liver [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA388863849 rs1594191726 |
389 | S>N | No |
ClinGen Ensembl |
|
|
CA388863858 rs1242363274 |
390 | D>N | No |
ClinGen gnomAD |
|
|
CA7088901 rs752720899 |
390 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs1566680062 CA388863907 |
394 | Q>* | No |
ClinGen Ensembl |
|
|
rs375942030 CA257535345 |
396 | H>Y | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA388863962 rs1361087931 |
398 | S>R | No |
ClinGen gnomAD |
|
|
rs372186092 CA388863975 CA257535346 |
399 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1345788121 CA388863972 |
399 | N>S | No |
ClinGen TOPMed |
|
|
rs1336479399 COSM263434 CA388863981 |
400 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1336479399 CA388863979 |
400 | E>Q | No |
ClinGen gnomAD |
|
|
rs770808979 CA7088905 |
402 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs779216995 CA7088906 |
403 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs775425686 CA388864054 |
407 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1165875686 CA388864059 |
407 | Q>R | No |
ClinGen TOPMed |
|
|
CA7088911 rs769167612 |
409 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7088910 rs761225961 |
409 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA388864104 rs777058053 |
411 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA7088913 rs777058053 |
411 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA388864127 rs1486475994 |
413 | L>R | No |
ClinGen TOPMed |
|
|
CA7088915 rs765472672 |
414 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs1594192074 CA388864133 |
414 | Q>R | No |
ClinGen Ensembl |
|
|
rs759080621 CA7088917 |
419 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs752135941 CA7088919 |
421 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1468265707 CA388864225 |
423 | D>N | No |
ClinGen TOPMed |
|
|
rs201726404 CA7088920 |
424 | K>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA7088921 rs764156147 |
424 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA7088922 rs753779369 |
426 | K>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 426 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1354444404 CA388864289 |
428 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs190985984 CA388864326 |
432 | S>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7088928 rs780261911 |
433 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs768685085 CA7088929 |
434 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1236940313 CA388864575 |
436 | A>V | No |
ClinGen gnomAD |
|
|
CA388864577 rs1279095388 |
437 | Q>E | No |
ClinGen gnomAD |
|
|
rs1279095388 CA388864576 |
437 | Q>K | No |
ClinGen gnomAD |
|
|
CA388864602 rs1225510128 |
440 | D>Y | No |
ClinGen gnomAD |
|
|
CA7088951 rs375450848 |
442 | K>N | No |
ClinGen ESP ExAC gnomAD |
|
|
rs747187953 CA7088950 |
442 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs781219239 CA7088952 |
444 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1227603377 CA388864632 |
445 | V>I | No |
ClinGen TOPMed |
|
|
rs1342579243 CA388864647 |
447 | N>S | No |
ClinGen TOPMed |
|
|
rs1299597346 CA388864658 |
448 | I>M | No |
ClinGen TOPMed |
|
|
rs1594198911 CA388864653 |
448 | I>V | No |
ClinGen Ensembl |
|
|
rs192566786 CA7088953 |
451 | K>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA388864684 rs1436629419 |
452 | H>R | No |
ClinGen gnomAD |
|
|
rs770190452 CA7088954 |
453 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1594198975 CA388864711 |
456 | V>I | No |
ClinGen Ensembl |
|
|
CA7088957 rs201228217 |
458 | L>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1385302435 CA388864736 |
460 | Q>K | No |
ClinGen TOPMed |
|
|
rs920085442 CA257535582 |
460 | Q>R | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 461 | N>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1030117244 CA257535583 |
462 | A>T | No |
ClinGen Ensembl |
|
| TCGA novel | 465 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 465 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1389666970 CA388864776 |
466 | S>P | No |
ClinGen gnomAD |
|
|
rs184853466 CA257535585 |
467 | Q>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7088959 rs775331955 |
468 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1017455134 CA257535586 |
471 | R>S | No |
ClinGen Ensembl |
|
|
CA7088962 rs776264535 |
472 | Q>H | No |
ClinGen ExAC |
|
|
CA7088964 rs200919038 |
474 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA388864827 rs1323146686 |
474 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1307912377 CA388864838 |
475 | P>L | No |
ClinGen TOPMed |
|
|
CA388864844 rs1410684356 |
476 | A>V | No |
ClinGen gnomAD |
|
|
CA7088965 rs750336813 |
478 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs762681847 CA7088966 |
479 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA7088967 rs766144242 |
481 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA257535588 rs200541068 |
482 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs368781265 CA257535589 |
483 | Q>K | Leber congenital amaurosis 6 (lca6) [Ensembl] | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs781308219 CA7088970 |
485 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA7088971 rs752788894 |
486 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs752788894 CA7088972 |
486 | T>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 487 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA388864918 rs370711678 |
488 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7088986 rs759270052 |
490 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1372655509 CA388865076 |
491 | S>R | No |
ClinGen TOPMed |
|
|
CA388865083 rs1426406294 |
491 | S>T | No |
ClinGen gnomAD |
|
|
CA257535718 rs1055644990 |
493 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1420366070 CA388865139 |
496 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1222393748 CA388865203 |
501 | L>P | No |
ClinGen TOPMed |
|
|
rs1255008761 CA388865214 |
502 | S>F | No |
ClinGen gnomAD |
|
|
CA7088991 rs754370735 |
503 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754370735 CA388865222 |
503 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA257535719 rs754370735 |
503 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA257535720 rs776115949 |
504 | V>M | No |
ClinGen Ensembl |
|
|
CA388865245 rs1203369388 |
506 | N>D | No |
ClinGen TOPMed |
|
|
rs779501281 CA7088993 |
508 | L>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388865272 rs779501281 |
508 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA227903 rs61751267 RCV000086239 |
509 | Q>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA7088995 rs772522272 |
510 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA257535721 rs911423186 |
513 | A>V | No |
ClinGen Ensembl |
|
| TCGA novel | 514 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs772778283 CA7089001 |
515 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762856248 CA7089002 |
515 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7089005 rs542639585 |
517 | L>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA257535722 rs942858100 |
517 | L>W | No |
ClinGen Ensembl |
|
|
CA257535723 rs759817551 |
518 | E>K | No |
ClinGen Ensembl |
|
| TCGA novel | 519 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA388865400 rs1384507929 |
520 | E>G | No |
ClinGen gnomAD |
|
|
rs1419784919 CA388865415 |
521 | K>N | No |
ClinGen gnomAD |
|
|
CA7089007 rs775613696 |
523 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA257535724 rs919983242 |
523 | R>W | No |
ClinGen Ensembl |
|
|
CA388865436 rs1453246163 |
524 | D>N | No |
ClinGen gnomAD |
|
|
CA7089008 rs552933130 |
525 | M>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA388865451 rs1337635928 |
525 | M>V | No |
ClinGen gnomAD |
|
|
CA257535725 rs1004194147 |
529 | Q>* | No |
ClinGen TOPMed |
|
|
rs765874054 CA7089012 |
529 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs757336787 CA7089011 |
529 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs367767674 CA7089013 |
530 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
rs758886206 CA7089014 |
533 | N>Y | No |
ClinGen ExAC gnomAD |
|
|
CA7089016 rs747826903 |
534 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755777906 CA7089017 |
535 | C>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7089018 rs777234027 |
535 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA388865550 rs371513311 |
536 | Y>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs907195332 CA257535726 |
536 | Y>C | No |
ClinGen Ensembl |
|
|
rs770390237 CA7089020 |
537 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs777514145 CA7089036 |
539 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs755232354 CA7089035 |
539 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1347016869 CA388865625 |
542 | A>T | No |
ClinGen gnomAD |
|
|
rs1011514299 CA257535768 |
542 | A>V | No |
ClinGen TOPMed |
|
|
rs1232991242 CA388865643 |
543 | M>I | No |
ClinGen gnomAD |
|
|
CA257535769 rs1007825048 |
543 | M>T | No |
ClinGen gnomAD |
|
|
rs1273869576 CA388865656 |
544 | M>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA7089038 rs748892211 |
544 | M>K | No |
ClinGen ExAC gnomAD |
|
|
CA7089040 rs778389059 |
545 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7089039 rs756799100 |
545 | T>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1489878856 CA388865710 |
549 | N>S | No |
ClinGen gnomAD |
|
|
CA257535770 rs977051095 |
551 | N>H | No |
ClinGen TOPMed |
|
| TCGA novel | 552 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 552 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 553 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA388865765 rs1185098858 |
554 | H>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA388865792 rs1419447002 |
556 | E>G | No |
ClinGen gnomAD |
|
| TCGA novel | 559 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA257535772 rs991412682 |
559 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs776963292 CA7089046 |
563 | R>G | Leber congenital amaurosis 6 (lca6) [Ensembl] | No |
ClinGen ExAC gnomAD |
|
rs145055116 CA7089048 |
563 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs145055116 CA7089047 |
563 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1594205165 CA388865886 |
566 | D>A | No |
ClinGen Ensembl |
|
|
CA257535774 rs372697513 |
566 | D>H | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA257535775 rs372697513 |
566 | D>Y | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA388865901 rs1432667676 |
567 | L>P | No |
ClinGen gnomAD |
|
|
RCV000086241 CA227905 rs61751273 |
569 | N>K | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA388865935 rs1364379385 |
570 | N>T | No |
ClinGen gnomAD |
|
|
CA388865946 rs1246707448 |
571 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1246707448 CA388865945 |
571 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs766914894 CA7089052 |
571 | R>H | No |
ClinGen ExAC TOPMed |
|
|
rs1317058642 CA388865953 |
572 | I>V | No |
ClinGen gnomAD |
|
|
CA388865967 rs1357433663 |
573 | K>* | No |
ClinGen gnomAD |
|
| TCGA novel | 575 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA388865992 rs1209280970 |
575 | L>P | No |
ClinGen gnomAD |
|
|
CA7089054 rs759969491 |
579 | L>* | No |
ClinGen ExAC gnomAD |
|
|
CA388866037 rs759969491 |
579 | L>S | No |
ClinGen ExAC gnomAD |
|
|
rs767741040 CA7089055 |
580 | R>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA388866051 rs1186021595 |
580 | R>S | No |
ClinGen gnomAD |
|
|
rs753553462 CA7089057 |
581 | S>N | No |
ClinGen ExAC TOPMed |
|
| TCGA novel | 581 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs756889126 CA388866089 |
583 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs778478985 CA7089059 |
584 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1315779878 CA388866106 |
585 | P>R | No |
ClinGen gnomAD |
|
|
rs1387707646 CA388866113 |
586 | T>R | No |
ClinGen gnomAD |
|
|
rs538772092 CA7089061 |
587 | S>P | No |
ClinGen 1000Genomes ExAC |
|
|
rs746897328 CA7089063 |
588 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs1393803023 CA388866817 |
591 | K>* | No |
ClinGen TOPMed |
|
|
CA7089092 rs745899255 |
591 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1330934849 CA388866826 |
592 | D>G | No |
ClinGen gnomAD |
|
|
CA388866823 rs1281599784 |
592 | D>H | No |
ClinGen gnomAD |
|
|
CA388866853 rs1303386177 |
596 | G>D | No |
ClinGen TOPMed |
|
|
rs772568245 CA7089093 |
597 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA388866863 rs74034910 |
598 | R>L | Leber congenital amaurosis 6 (lca6) [Ensembl] | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA388866872 rs1415117927 |
600 | L>S | No |
ClinGen TOPMed |
|
|
CA7089102 rs767597417 |
603 | C>R | No |
ClinGen ExAC gnomAD |
|
| VAR_065727 | 603 | C>S | No | UniProt | |
|
CA388866889 rs1217810346 |
603 | C>Y | No |
ClinGen TOPMed |
|
|
CA7089103 rs752636198 |
606 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs576270075 CA7089104 |
607 | L>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA7089105 rs777682311 |
608 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA7089106 rs749579827 |
610 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs1485955933 CA388866958 |
614 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1390236427 CA388866968 |
615 | K>E | No |
ClinGen gnomAD |
|
|
rs1383147716 CA388866981 |
616 | V>M | No |
ClinGen gnomAD |
|
|
rs1325199161 CA388867009 |
618 | I>V | No |
ClinGen gnomAD |
|
|
CA7089109 rs542030078 |
622 | H>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1191991635 CA388867054 |
622 | H>Y | No |
ClinGen gnomAD |
|
|
CA7089110 rs772090790 |
623 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs776025469 CA7089111 |
623 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA388867111 rs1247485541 |
626 | N>S | No |
ClinGen gnomAD |
|
| TCGA novel | 627 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA388867129 rs1263339632 |
628 | F>I | No |
ClinGen gnomAD |
|
|
rs572367084 CA7089114 |
631 | H>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA388867186 rs1187907183 |
632 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA7089116 rs774019346 |
633 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1001318002 CA257536060 |
634 | Q>K | No |
ClinGen Ensembl |
|
|
rs767116798 CA7089118 |
635 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA257536062 rs1010290273 VAR_065729 |
638 | T>I | No |
ClinGen UniProt TOPMed dbSNP gnomAD |
|
|
CA257536063 rs926693760 |
640 | A>V | No |
ClinGen TOPMed |
|
|
rs779025194 CA7089124 |
642 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1477088537 CA388867300 |
643 | A>V | No |
ClinGen TOPMed |
|
|
rs1423554687 CA388867309 |
645 | A>T | No |
ClinGen TOPMed |
|
|
rs746080324 CA7089125 |
645 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA7089126 rs758512410 |
646 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA388867337 rs1194776742 |
649 | Q>H | No |
ClinGen TOPMed |
|
|
rs747575530 CA7089128 |
649 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs1207832537 CA388867334 |
649 | Q>P | No |
ClinGen gnomAD |
|
|
rs769167245 CA7089129 |
650 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388867343 rs769167245 |
650 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388867355 rs1462551011 |
652 | T>I | No |
ClinGen gnomAD |
|
|
CA388867360 rs1594212489 |
653 | F>S | No |
ClinGen Ensembl |
|
|
rs1180193659 CA388867369 |
654 | C>F | No |
ClinGen gnomAD |
|
|
rs748493769 CA7089131 |
656 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7089132 rs564462751 |
657 | S>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs773927990 CA7089133 |
658 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs966228249 CA388867444 |
660 | D>E | No |
ClinGen gnomAD |
|
|
rs759235827 CA7089134 |
660 | D>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
|
rs1177534305 CA388867481 |
663 | T>I | No |
ClinGen gnomAD |
|
|
rs1594212597 CA388867473 |
663 | T>P | No |
ClinGen Ensembl |
|
|
rs929334160 CA257536065 |
664 | H>Q | No |
ClinGen TOPMed |
|
|
rs1446549542 CA388867504 |
665 | C>S | No |
ClinGen gnomAD |
|
|
CA388867522 rs1377877363 |
667 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1308734493 CA388867560 |
670 | V>L | No |
ClinGen gnomAD |
|
|
rs1218981990 CA388867587 |
672 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1328030621 CA388867609 |
674 | P>A | No |
ClinGen TOPMed |
|
|
rs760192969 CA7089137 |
674 | P>H | No |
ClinGen ExAC gnomAD |
|
|
CA257536066 rs997721971 |
677 | D>G | No |
ClinGen Ensembl |
|
|
CA7089140 rs761562187 |
679 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA7089142 rs750676935 |
680 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA257536067 rs868548381 |
681 | Q>* | No |
ClinGen Ensembl |
|
|
rs1249911932 CA388867702 |
681 | Q>R | No |
ClinGen gnomAD |
|
|
CA257536068 rs890716590 |
683 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1566342086 CA388867731 |
684 | M>V | No |
ClinGen Ensembl |
|
|
rs758603764 CA7089143 |
685 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs111288670 CA257536069 |
686 | T>I | No |
ClinGen Ensembl |
|
|
rs780193224 CA257536070 |
687 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780193224 CA7089144 |
687 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781576477 CA7089147 |
690 | F>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1594212973 CA388867859 |
694 | L>I | No |
ClinGen Ensembl |
|
|
CA7089148 rs377020451 |
695 | Q>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7089149 rs778197822 |
695 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7089150 rs749603532 |
698 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs771851462 CA7089151 |
699 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs768190736 CA7089154 |
700 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs775239691 CA7089152 |
700 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1456098073 CA388867937 |
701 | L>F | No |
ClinGen TOPMed |
|
|
CA388867980 rs1184723905 |
705 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA388867982 rs1341205662 |
706 | A>T | No |
ClinGen TOPMed |
|
|
CA7089160 rs762670808 |
707 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs372090642 CA7089159 |
707 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1413131336 CA388868018 |
708 | A>V | No |
ClinGen gnomAD |
|
|
rs1364924625 CA388868026 |
709 | S>G | No |
ClinGen Ensembl |
|
|
CA388868049 rs927137137 |
710 | E>D | No |
ClinGen gnomAD |
|
|
CA257536071 rs1045661664 |
710 | E>V | No |
ClinGen Ensembl |
|
|
CA388868058 rs1232275939 |
711 | H>R | No |
ClinGen TOPMed |
|
|
CA388868100 rs1444611662 |
714 | L>P | No |
ClinGen TOPMed |
|
|
CA7089163 rs755065072 |
714 | L>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA257536073 rs1009663907 |
716 | A>E | No |
ClinGen TOPMed |
|
|
CA388868114 rs1376310690 |
716 | A>T | No |
ClinGen TOPMed |
|
|
CA388868151 rs1594213253 |
719 | I>V | No |
ClinGen Ensembl |
|
|
rs1594213282 CA388868230 |
724 | V>G | No |
ClinGen Ensembl |
|
|
CA388868221 rs1351213806 |
724 | V>M | No |
ClinGen gnomAD |
|
|
CA257536074 RCV000732654 rs755791291 |
725 | L>V | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
rs778072446 CA257536075 |
726 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757642045 CA7089169 |
726 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA7089168 rs749698461 |
726 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs778072446 CA7089167 |
726 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388868311 rs1246754738 |
731 | V>I | No |
ClinGen gnomAD |
|
|
rs1466904339 CA388868328 |
732 | H>R | No |
ClinGen TOPMed |
|
|
CA7089172 rs768117752 |
733 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA7089175 rs769776142 |
735 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7089176 rs769776142 |
735 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs529475742 CA7089177 |
736 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1443900524 CA388868360 |
737 | L>V | No |
ClinGen gnomAD |
|
|
rs1448378996 CA388868367 |
738 | I>T | No |
ClinGen gnomAD |
|
|
rs774600464 CA7089179 |
738 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA7089197 rs774122422 |
741 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388868398 rs1214200780 |
742 | G>R | No |
ClinGen TOPMed |
|
|
rs569746036 CA257536085 |
743 | E>G | No |
ClinGen 1000Genomes |
|
|
rs535695411 CA7089200 |
746 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA388868432 rs1285261498 |
747 | V>F | No |
ClinGen TOPMed |
|
|
rs1324704801 CA388868441 |
748 | L>R | No |
ClinGen gnomAD |
|
| TCGA novel | 750 | Y>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1239652422 CA388868475 |
752 | M>I | No |
ClinGen gnomAD |
|
|
rs760853561 CA7089201 |
753 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs376493676 CA7089202 |
755 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs754461580 COSM3419698 CA7089203 |
755 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs754461580 CA388868490 |
755 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1186166215 CA388868504 |
757 | P>L | No |
ClinGen gnomAD |
|
|
rs937200139 CA257536086 |
758 | I>M | No |
ClinGen Ensembl |
|
|
rs1233116030 CA388868517 |
759 | K>N | No |
ClinGen gnomAD |
|
|
CA7089205 rs199593721 |
762 | L>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA7089208 rs758652031 |
764 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7089206 rs750803190 |
764 | A>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 769 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs745694912 CA7089215 |
770 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA388868590 rs1273603972 |
771 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
CA388868591 rs1273603972 |
771 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs577932201 CA257536087 |
772 | Q>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA388868602 rs1199391518 |
773 | V>L | No |
ClinGen gnomAD |
|
| TCGA novel | 775 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7089217 rs775817675 |
776 | S>* | No |
ClinGen ExAC gnomAD |
|
|
rs1594214311 CA388868620 |
776 | S>T | No |
ClinGen Ensembl |
|
|
rs1483742101 CA388868630 |
777 | T>I | No |
ClinGen gnomAD |
|
|
CA7089220 rs768913743 |
778 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7089219 rs768913743 |
778 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388868659 rs1375869921 |
782 | G>D | No |
ClinGen gnomAD |
|
|
rs563490738 CA7089223 |
783 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA388868676 rs1392161279 |
785 | A>D | No |
ClinGen gnomAD |
|
| TCGA novel | 785 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1427873310 CA388868691 |
787 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA388868706 rs1366378608 |
789 | E>D | No |
ClinGen gnomAD |
|
|
CA388868725 rs1293615457 |
790 | F>L | No |
ClinGen TOPMed |
|
|
CA7089244 rs774595166 COSM263440 |
792 | S>L | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs766829101 CA7089243 |
792 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs774595166 CA257536128 |
792 | S>W | No |
ClinGen ExAC gnomAD |
|
|
CA388868755 rs1026104462 |
795 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
CA257536129 rs1026104462 |
795 | W>C | No |
ClinGen TOPMed gnomAD |
|
|
rs756795357 CA7089248 |
795 | W>G | No |
ClinGen ExAC gnomAD |
|
|
CA7089249 rs764645510 |
796 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA388868757 rs1566344172 |
796 | E>K | No |
ClinGen Ensembl |
|
|
CA7089250 rs750432423 |
797 | P>S | No |
ClinGen ExAC TOPMed |
|
|
rs565837539 CA7089252 |
800 | E>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1458116430 CA388868793 |
801 | L>Q | No |
ClinGen gnomAD |
|
|
rs148331694 CA257536130 |
803 | I>F | No |
ClinGen 1000Genomes |
|
|
COSM954385 CA388868825 rs1387094755 |
804 | E>A | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs367869842 CA7089254 |
804 | E>K | No |
ClinGen ESP ExAC gnomAD |
|
|
rs367869842 CA388868822 |
804 | E>Q | No |
ClinGen ESP ExAC gnomAD |
|
|
CA388868844 rs1461328623 |
805 | I>T | No |
ClinGen TOPMed |
|
|
rs1437280970 CA388868888 |
808 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs748351426 CA7089256 |
809 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA7089257 rs374681726 |
810 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| VAR_065732 | 812 | R>H | does not affect the interaction with NPHP4 [UniProt] | No | UniProt |
|
rs749333696 CA7089259 |
812 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1304371827 CA388868957 |
813 | S>I | No |
ClinGen Ensembl |
|
|
rs372647080 CA388868973 |
814 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA TOPMed gnomAD |
|
rs375413087 CA7089264 |
815 | W>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7089263 rs767832323 |
815 | W>R | No |
ClinGen ExAC |
|
|
rs761438226 CA7089265 |
816 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA7089267 rs749904156 |
819 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA257536133 rs936240310 |
820 | P>H | No |
ClinGen TOPMed |
|
|
CA388869077 rs1382924559 |
822 | P>S | No |
ClinGen TOPMed |
|
|
rs1382924559 CA388869073 |
822 | P>T | No |
ClinGen TOPMed |
|
|
rs751521888 CA7089271 |
823 | Y>F | Cone-rod dystrophy 13 (cord13) [Ensembl] | No |
ClinGen ExAC gnomAD |
|
CA7089270 rs766249439 |
823 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA388869182 rs1594216057 |
830 | T>P | No |
ClinGen Ensembl |
|
|
CA7089276 rs777989366 |
835 | D>Y | No |
ClinGen ExAC |
|
|
rs1410118070 CA388869226 |
836 | T>A | No |
ClinGen gnomAD |
|
|
rs771018578 CA7089280 |
836 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388869225 rs1410118070 |
836 | T>P | No |
ClinGen gnomAD |
|
|
rs1348442013 CA388869230 |
837 | A>P | No |
ClinGen gnomAD |
|
|
rs1231166099 CA388869242 |
839 | I>F | No |
ClinGen gnomAD |
|
| TCGA novel | 839 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7089288 rs769362715 |
841 | A>G | No |
ClinGen ExAC gnomAD |
|
| VAR_065736 | 841 | A>T | No | UniProt | |
|
CA388869273 rs74034911 |
843 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA388869275 rs1331184432 |
844 | N>D | No |
ClinGen Ensembl |
|
|
rs1192084424 CA612384098 |
846 | Y>* | No |
ClinGen gnomAD |
|
|
rs751616559 CA7089292 |
848 | R>T | No |
ClinGen ExAC gnomAD |
|
|
rs759534237 CA7089293 |
849 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1566344792 CA388869349 |
855 | V>L | No |
ClinGen Ensembl |
|
|
RCV000086246 rs61751269 |
856 | L>missing | No |
ClinVar dbSNP |
|
|
rs777883714 CA7089296 |
858 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA7089297 rs754055883 |
859 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1369458987 CA388869376 |
860 | D>N | No |
ClinGen gnomAD |
|
|
rs1217460770 CA388869384 |
861 | L>M | No |
ClinGen gnomAD |
|
|
CA388869410 rs201639860 |
864 | Y>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA257536139 rs1026220517 |
864 | Y>C | No |
ClinGen TOPMed |
|
|
rs746257247 CA257536138 |
864 | Y>H | No |
ClinGen Ensembl |
|
|
CA388869431 rs1222586521 |
868 | E>V | No |
ClinGen gnomAD |
|
|
CA257536140 rs181222325 |
869 | A>V | No |
ClinGen 1000Genomes |
|
|
rs1331908454 CA388869442 |
870 | L>S | No |
ClinGen gnomAD |
|
|
rs780497273 CA7089300 |
871 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1487698817 CA388869447 |
871 | S>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA7089302 rs747355604 |
872 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7089303 rs753100862 |
873 | H>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774012865 CA7089306 |
874 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs61751274 VAR_076792 CA227915 RCV000086248 |
876 | D>G | impairs interaction with NPHP4 [UniProt] | No |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
rs371117194 CA7089308 |
878 | E>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA388869513 rs1325166084 |
881 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA388869511 rs1325166084 |
881 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA7089309 rs200657688 |
882 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| VAR_065738 | 883 | G>D | No | UniProt | |
|
rs368426313 CA7089311 |
884 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs757511584 CA388869538 |
885 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA7089313 rs757511584 |
885 | Y>S | No |
ClinGen ExAC gnomAD |
|
|
rs780587095 CA388869562 |
890 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388869564 rs374913550 |
890 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1594216944 CA388869565 |
891 | V>M | No |
ClinGen Ensembl |
|
|
rs768968296 CA7089319 |
892 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768968296 CA388869571 |
892 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388869595 rs1179331931 |
896 | L>F | No |
ClinGen gnomAD |
|
|
rs1474781586 CA388869597 |
896 | L>H | No |
ClinGen gnomAD |
|
|
CA388869607 rs1182119707 |
898 | K>E | No |
ClinGen gnomAD |
|
|
rs1330207465 CA388869610 |
898 | K>R | No |
ClinGen TOPMed |
|
|
rs1594217045 CA388869629 |
901 | S>T | No |
ClinGen Ensembl |
|
|
CA257536144 rs918924266 |
904 | G>S | No |
ClinGen Ensembl |
|
|
CA7089337 rs755524774 |
907 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs759254680 CA7089338 |
909 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7089340 rs756501591 |
910 | D>H | No |
ClinGen ExAC |
|
|
CA388870487 rs1357496245 |
911 | P>T | No |
ClinGen gnomAD |
|
| TCGA novel | 914 | K>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 915 | P>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs745507144 CA7089342 |
916 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs771761377 CA7089343 |
917 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1279504140 CA388870538 |
918 | S>F | No |
ClinGen gnomAD |
|
|
rs1555302659 RCV000086249 |
921 | V>missing | No |
ClinVar dbSNP |
|
|
CA388870555 rs1272895307 |
921 | V>L | No |
ClinGen TOPMed |
|
|
CA388870564 rs1346245632 |
922 | Q>P | No |
ClinGen gnomAD |
|
|
CA388870570 rs1402057058 |
923 | L>Q | No |
ClinGen Ensembl |
|
|
rs1594220746 CA388870577 |
924 | D>G | No |
ClinGen Ensembl |
|
|
CA7089344 rs746435599 |
926 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1229285180 CA388870606 |
928 | P>S | No |
ClinGen TOPMed |
|
|
CA257536286 rs894846700 |
930 | I>V | No |
ClinGen gnomAD |
|
|
CA7089347 rs761644947 |
931 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA388870625 rs761644947 |
931 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs763149858 CA7089350 |
932 | P>R | No |
ClinGen ExAC |
|
|
rs373491610 CA388870643 |
934 | S>N | No |
ClinGen ESP ExAC gnomAD |
|
|
rs766456019 CA7089351 |
934 | S>R | No |
ClinGen ExAC |
|
|
CA7089352 rs373491610 |
934 | S>T | No |
ClinGen ESP ExAC gnomAD |
|
|
CA257536287 rs1043819849 |
935 | F>S | No |
ClinGen Ensembl |
|
|
CA257536288 rs903517824 |
939 | E>Q | No |
ClinGen Ensembl |
|
|
rs369554196 CA7089354 |
940 | A>D | No |
ClinGen ESP ExAC |
|
|
CA7089353 rs376805437 |
940 | A>P | No |
ClinGen ESP ExAC gnomAD |
|
|
rs753237146 CA7089355 |
941 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs1308897811 CA388870717 |
945 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs575204640 CA7089356 |
947 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA388870730 rs575204640 |
947 | T>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1408393799 CA388870751 |
950 | S>N | No |
ClinGen gnomAD |
|
|
CA7089357 rs778265703 |
955 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs867712361 CA257536292 |
958 | E>K | No |
ClinGen Ensembl |
|
|
CA7089359 rs758124463 |
959 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7089361 rs35810926 |
960 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7089363 rs369202663 |
963 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
rs757513142 CA7089376 |
967 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs552951112 CA7089377 |
968 | M>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1211361786 CA388870897 |
970 | S>Y | No |
ClinGen gnomAD |
|
|
rs1048389828 CA257536357 |
973 | V>I | No |
ClinGen TOPMed |
|
|
CA388870928 rs886050399 |
975 | I>N | No |
ClinGen TOPMed gnomAD |
|
|
CA257536358 rs900012610 |
977 | A>T | No |
ClinGen Ensembl |
|
|
CA257536359 rs995654544 |
978 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1250035608 CA388870966 |
979 | Q>H | No |
ClinGen gnomAD |
|
|
CA388870987 rs376213645 |
981 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM284685 rs376213645 CA7089381 |
981 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA7089382 rs572785791 |
982 | S>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA7089383 rs777650004 |
983 | K>M | No |
ClinGen ExAC gnomAD |
|
|
CA388871012 rs371419221 |
983 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA388871044 rs1394197890 |
986 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA7089385 rs201597595 |
988 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7089386 rs774678526 |
989 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7089388 rs759678050 |
990 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1390252628 CA388871113 |
991 | E>G | No |
ClinGen gnomAD |
|
| TCGA novel | 992 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7089389 rs772275645 |
993 | K>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1484164805 CA388871155 |
994 | E>V | No |
ClinGen TOPMed |
|
|
CA388871183 rs1254110768 |
996 | E>G | No |
ClinGen TOPMed |
|
|
CA257536361 rs750970301 |
997 | H>Y | No |
ClinGen Ensembl |
|
|
CA388871265 rs1340635058 |
1002 | Y>C | No |
ClinGen gnomAD |
|
|
rs199883903 CA257536362 |
1003 | S>P | No |
ClinGen 1000Genomes |
|
|
rs764718096 COSM954391 CA7089393 |
1010 | R>G | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA388871899 rs969637624 |
1010 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA388871905 rs1484949484 |
1011 | I>V | No |
ClinGen gnomAD |
|
|
CA7089395 rs762276754 |
1012 | G>D | No |
ClinGen ExAC |
|
|
rs754373368 CA7089394 |
1012 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1289388105 CA388871914 |
1013 | V>I | No |
ClinGen TOPMed |
|
|
CA7089397 rs751283891 COSM469782 |
1014 | Q>* | kidney Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA7089398 rs370740859 |
1014 | Q>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs780757054 CA7089399 |
1015 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA7089400 rs752237021 |
1016 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA7089401 rs374298935 |
1019 | M>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1594225065 TCGA novel CA388871972 |
1021 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Ensembl |
|
CA388871976 rs367899074 |
1022 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs750041493 CA7089402 |
1023 | S>T | No |
ClinGen ExAC |
|
|
rs1287851951 CA388871989 |
1024 | L>F | No |
ClinGen gnomAD |
|
| TCGA novel | 1024 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 1024 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA388872002 rs1402279569 |
1025 | N>K | No |
ClinGen gnomAD |
|
|
rs1397469132 CA388872009 |
1026 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA7089405 rs757145904 |
1028 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs778563328 CA7089406 |
1029 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs371675108 CA7089407 |
1031 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7089409 rs775804131 |
1033 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs375835014 CA7089429 |
1034 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7089430 rs776587567 |
1035 | V>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1040 | W>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs988867957 CA257536561 |
1042 | F>I | No |
ClinGen gnomAD |
|
|
CA7089431 rs748192524 |
1042 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388872145 rs1393956399 |
1045 | T>A | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 1047 | S>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs770235549 CA7089432 |
1047 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs763279017 CA7089434 |
1049 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1352582546 CA388872174 |
1049 | I>V | No |
ClinGen gnomAD |
|
|
CA7089435 rs766701403 |
1050 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA388872189 rs1438807111 |
1051 | D>E | No |
ClinGen gnomAD |
|
|
rs775193329 CA7089436 |
1051 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs760310539 CA7089437 |
1052 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA7089438 rs201521970 VAR_067187 |
1057 | H>L | Cone-rod dystrophy 13 (cord13) found in a patient associated with LCA6 [Ensembl, UniProt] | No |
ClinGen UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA7089440 rs756754711 |
1058 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1062 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA388872284 rs1203490574 |
1064 | L>S | No |
ClinGen TOPMed |
|
|
CA388872309 rs1213596636 |
1068 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1213596636 CA388872310 |
1068 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1213596636 COSM3419703 CA388872308 |
1068 | A>T | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA257536563 rs372226099 |
1074 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7089443 rs533471221 |
1074 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7089444 rs533471221 |
1074 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA388872357 rs1165134621 |
1076 | H>Y | No |
ClinGen gnomAD |
|
|
rs781426298 CA7089448 |
1077 | P>A | No |
ClinGen ExAC |
|
| TCGA novel | 1077 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1459855378 CA388872371 |
1078 | V>I | No |
ClinGen gnomAD |
|
|
rs553302219 CA257536564 |
1079 | N>D | No |
ClinGen Ensembl |
|
|
rs751421999 CA7089470 |
1083 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7089471 rs751421999 |
1083 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7089472 rs781308681 |
1084 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs1313727793 CA388873065 |
1086 | Q>K | No |
ClinGen gnomAD |
|
|
rs1210425656 CA388873070 |
1086 | Q>P | No |
ClinGen gnomAD |
|
|
CA388873069 rs1210425656 |
1086 | Q>R | No |
ClinGen gnomAD |
|
|
CA7089474 rs756204198 |
1087 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs777901439 CA7089475 |
1089 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA388873085 rs1484576539 |
1089 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA388873098 rs749295693 |
1091 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7089476 rs749295693 |
1091 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1092 | E>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1170971723 CA388873124 |
1094 | Q>H | No |
ClinGen TOPMed |
|
|
rs1023302172 CA257537008 |
1095 | T>N | No |
ClinGen Ensembl |
|
|
CA388873136 rs1471154570 |
1096 | T>I | No |
ClinGen gnomAD |
|
|
rs779356445 CA7089478 |
1097 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746275518 CA7089479 |
1101 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs924929431 CA257537010 |
1103 | V>A | No |
ClinGen Ensembl |
|
|
rs373866085 CA7089482 |
1104 | P>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1269495859 CA388873189 |
1104 | P>L | No |
ClinGen TOPMed |
|
|
CA388873197 rs761524733 |
1106 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs761524733 CA7089484 |
1106 | M>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1349361719 CA388873235 |
1111 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA388873240 rs1346141644 |
1112 | K>E | No |
ClinGen TOPMed |
|
|
rs769509351 CA7089503 |
1114 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA7089504 rs748847818 |
1116 | E>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA388856739 rs1388092014 |
1117 | K>R | No |
ClinGen TOPMed |
|
|
rs1194195334 CA388856750 |
1118 | M>T | No |
ClinGen gnomAD |
|
|
rs183595530 CA7089505 |
1119 | C>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1047316095 CA257547013 |
1121 | E>* | No |
ClinGen Ensembl |
|
|
rs767287670 CA388856816 |
1123 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767287670 CA7089507 |
1123 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1391694677 CA388856836 |
1124 | S>F | No |
ClinGen gnomAD |
|
| TCGA novel | 1126 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA388856907 rs1295870315 |
1130 | E>G | No |
ClinGen gnomAD |
|
| VAR_067188 | 1130 | E>Q | found in a patient with LCA6 [UniProt] | No | UniProt |
|
CA388856921 rs755631828 |
1131 | A>G | No |
ClinGen gnomAD |
|
|
CA257547023 rs755631828 |
1131 | A>V | No |
ClinGen gnomAD |
|
|
rs1269439681 CA388856940 |
1133 | V>M | No |
ClinGen gnomAD |
|
|
CA388856962 rs1235103331 |
1134 | M>I | No |
ClinGen gnomAD |
|
|
rs1566365922 CA388856959 |
1134 | M>T | No |
ClinGen Ensembl |
|
|
CA257547029 rs974127830 |
1138 | N>I | No |
ClinGen TOPMed gnomAD |
|
|
CA388857018 rs974127830 |
1138 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs374187449 CA7089511 |
1139 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA388857084 rs765299022 |
1143 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1143 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA388857106 rs758959479 |
1145 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7089514 rs758959479 |
1145 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA257547042 rs866567428 |
1146 | Y>* | No |
ClinGen TOPMed |
|
|
rs1263145929 CA388857112 |
1146 | Y>D | No |
ClinGen TOPMed |
|
|
CA388857140 rs144704092 |
1150 | D>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7089516 rs144704092 |
1150 | D>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7089520 rs770629140 |
1153 | L>F | No |
ClinGen ExAC |
|
|
rs1380219519 CA388857199 |
1159 | P>L | No |
ClinGen gnomAD |
|
|
CA388857198 rs1219546614 |
1159 | P>S | No |
ClinGen gnomAD |
|
|
rs1355879266 CA388857223 |
1163 | R>M | No |
ClinGen gnomAD |
|
|
CA257547094 rs1039554002 |
1165 | P>S | No |
ClinGen TOPMed |
|
|
rs1416332398 CA388857242 |
1166 | R>T | No |
ClinGen gnomAD |
|
|
CA388857248 rs1291367564 |
1167 | A>S | No |
ClinGen gnomAD |
|
|
rs1291367564 CA388857246 |
1167 | A>T | No |
ClinGen gnomAD |
|
|
rs1167249622 CA388857251 |
1167 | A>V | No |
ClinGen TOPMed |
|
|
rs763866704 CA7089527 |
1168 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs201191634 CA388857258 |
1169 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 1172 | H>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs750539898 CA7089531 |
1173 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1176 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA388857315 rs1420268218 |
1176 | S>R | No |
ClinGen gnomAD |
|
|
CA257547120 rs1030888005 |
1176 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1395146301 CA388857444 |
1180 | D>N | No |
ClinGen gnomAD |
|
|
CA7089546 rs761547160 |
1182 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs770036021 CA7089547 |
1182 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs952203512 CA257548420 |
1184 | Q>H | No |
ClinGen TOPMed |
|
|
rs763141463 CA7089548 |
1184 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA7089551 rs369504824 |
1189 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7089553 rs183313318 |
1190 | R>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7089552 rs183313318 |
1190 | R>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA388857511 rs1297290227 |
1191 | R>Q | No |
ClinGen gnomAD |
|
|
CA388857514 rs1566368652 |
1192 | F>I | No |
ClinGen Ensembl |
|
|
CA7089557 rs757996377 |
1193 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA7089560 rs746471434 |
1194 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7089562 rs781067701 |
1195 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7089561 rs781067701 |
1195 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1448467540 CA388857547 |
1197 | L>M | No |
ClinGen TOPMed |
|
|
CA388857550 rs1423955888 |
1197 | L>R | No |
ClinGen gnomAD |
|
|
rs1428905683 CA388857553 |
1198 | N>D | No |
ClinGen gnomAD |
|
|
rs1172357323 CA388857556 |
1198 | N>S | No |
ClinGen gnomAD |
|
|
rs1403311040 CA388857560 |
1199 | G>R | No |
ClinGen TOPMed |
|
|
rs773540240 CA7089564 |
1201 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388857611 rs1414989289 |
1206 | H>D | No |
ClinGen TOPMed |
|
|
rs763079462 CA7089565 |
1206 | H>L | No |
ClinGen ExAC gnomAD |
|
|
rs1287289656 CA388857952 |
1208 | K>R | No |
ClinGen gnomAD |
|
|
rs61751272 RCV000086253 |
1210 | T>missing | No |
ClinVar dbSNP |
|
|
rs1340317371 CA388857985 |
1213 | S>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs753006380 CA257551094 |
1213 | S>R | No |
ClinGen TOPMed |
|
|
CA7089582 rs777433087 |
1214 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA388857998 rs1197992874 |
1215 | P>S | No |
ClinGen TOPMed |
|
|
rs749051039 CA7089583 RCV000311016 |
1216 | L>P | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs1316957086 CA388858012 |
1217 | D>E | No |
ClinGen gnomAD |
|
|
CA388858025 rs1217538255 |
1219 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA388858026 rs1217538255 |
1219 | E>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1239956303 COSM1368954 CA388858035 |
1220 | K>N | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA388858064 rs1348008050 |
1224 | E>A | No |
ClinGen TOPMed |
|
|
CA7089585 rs774588678 |
1228 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1474212159 CA388858110 |
1231 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1307605933 CA388858118 |
1232 | Q>* | No |
ClinGen TOPMed |
|
|
rs1392934901 CA388858135 |
1234 | W>* | No |
ClinGen TOPMed |
|
|
rs1408843177 CA388858145 |
1235 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA388858138 rs1181177963 |
1235 | Q>K | No |
ClinGen gnomAD |
|
|
CA7089588 rs776209585 |
1238 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA257551147 rs987359104 |
1242 | D>A | No |
ClinGen TOPMed |
|
|
rs776882749 CA7089591 |
1242 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1242 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs372485763 CA7089592 |
1244 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7089593 rs765987753 |
1246 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
RCV000658684 rs767010058 CA7089596 |
1249 | D>G | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs762134535 CA7089612 |
1250 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1366328748 CA388858252 |
1251 | V>I | No |
ClinGen TOPMed |
|
|
CA388858268 rs1168922642 |
1253 | P>R | No |
ClinGen gnomAD |
|
|
rs774057081 CA7089614 |
1254 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA7089615 rs759191514 |
1258 | T>I | Cone-rod dystrophy 13 (cord13) [Ensembl] | No |
ClinGen ExAC TOPMed gnomAD |
|
CA388858298 rs759191514 |
1258 | T>N | Cone-rod dystrophy 13 (cord13) [Ensembl] | No |
ClinGen ExAC TOPMed gnomAD |
|
rs767097826 CA7089616 |
1260 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA7089618 rs763974550 |
1261 | G>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1262 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA388858318 rs1341177210 |
1262 | R>M | No |
ClinGen gnomAD |
|
|
CA257553620 rs866154508 |
1263 | L>P | No |
ClinGen TOPMed |
|
|
rs866154508 CA257553623 |
1263 | L>R | No |
ClinGen TOPMed |
|
|
CA388858327 rs1224049964 |
1264 | K>E | No |
ClinGen TOPMed |
|
|
CA7089619 rs753788745 |
1264 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA388858339 rs1566376710 |
1266 | S>T | No |
ClinGen Ensembl |
|
|
rs1265355515 CA388858346 |
1267 | L>V | No |
ClinGen gnomAD |
|
|
CA7089620 rs757070531 |
1268 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA7089622 rs750187066 |
1272 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA7089621 rs778860397 |
1272 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA388858380 rs1205003239 |
1273 | L>F | No |
ClinGen TOPMed |
|
|
CA7089623 rs758718790 |
1274 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1308989407 CA388858390 |
1274 | H>Y | No |
ClinGen TOPMed |
|
|
CA7089624 rs546955248 |
1275 | A>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA388858399 rs1223177402 |
1275 | A>S | No |
ClinGen TOPMed |
|
|
CA388858410 rs1463468451 |
1276 | I>F | No |
ClinGen gnomAD |
|
|
CA7089625 rs747100139 |
1276 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA388858466 rs1387928055 |
1280 | M>K | No |
ClinGen gnomAD |
|
|
CA388858481 rs1385915494 |
1281 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
CA388858517 rs1566376913 |
1284 | L>W | No |
ClinGen Ensembl |
|
|
rs1566376938 CA388858530 |
1285 | F>S | No |
ClinGen Ensembl |
No associated diseases with Q96KN7
No regional properties for Q96KN7
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q96KN7 | |||
Functions
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| axoneme | The bundle of microtubules and associated proteins that forms the core of cilia (also called flagella) in eukaryotic cells and is responsible for their movements. |
| ciliary transition zone | A region of the cilium between the basal body and proximal segment that is characterized by Y-shaped assemblages that connect axonemal microtubules to the ciliary membrane. The ciliary transition zone appears to function as a gate that controls ciliary membrane composition and separates the cytosol from the ciliary plasm. |
| photoreceptor connecting cilium | The portion of the photoreceptor cell cilium linking the photoreceptor inner and outer segments. It's considered to be equivalent to the ciliary transition zone. |
| photoreceptor distal connecting cilium | The distal region of the photoreceptor connecting cilium is structurally unique to the photoreceptor and is maintained by retina-specific protein, SPATA7, and its interacting partners RPGR and RPGRIP1. It is essential for photoreceptor sensory cilium stability. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
5 GO annotations of biological process
| Name | Definition |
|---|---|
| neural precursor cell proliferation | The multiplication or reproduction of neural precursor cells, resulting in the expansion of a cell population. A neural precursor cell is either a nervous system stem cell or a nervous system progenitor cell. |
| non-motile cilium assembly | The aggregation, arrangement and bonding together of a set of components to form a non-motile cilium. |
| response to stimulus | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. The process begins with detection of the stimulus and ends with a change in state or activity or the cell or organism. |
| retinal rod cell development | Development of a rod cell, one of the sensory cells in the eye that reacts to the presence of light. Rod cells contain the photopigment rhodopsin or porphyropsin and are responsible for vision in dim light. |
| visual perception | The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSHLVDPTSG | DLPVRDIDAI | PLVLPASKGK | NMKTQPPLSR | MNREELEDSF | FRLREDHMLV |
| 70 | 80 | 90 | 100 | 110 | 120 |
| KELSWKQQDE | IKRLRTTLLR | LTAAGRDLRV | AEEAAPLSET | ARRGQKAGWR | QRLSMHQRPQ |
| 130 | 140 | 150 | 160 | 170 | 180 |
| MHRLQGHFHC | VGPASPRRAQ | PRVQVGHRQL | HTAGAPVPEK | PKRGPRDRLS | YTAPPSFKEH |
| 190 | 200 | 210 | 220 | 230 | 240 |
| ATNENRGEVA | SKPSELVSGS | NSIISFSSVI | SMAKPIGLCM | PNSAHIMASN | TMQVEEPPKS |
| 250 | 260 | 270 | 280 | 290 | 300 |
| PEKMWPKDEN | FEQRSSLECA | QKAAELRASI | KEKVELIRLK | KLLHERNASL | VMTKAQLTEV |
| 310 | 320 | 330 | 340 | 350 | 360 |
| QEAYETLLQK | NQGILSAAHE | ALLKQVNELR | AELKEESKKA | VSLKSQLEDV | SILQMTLKEF |
| 370 | 380 | 390 | 400 | 410 | 420 |
| QERVEDLEKE | RKLLNDNYDK | LLESMLDSSD | SSSQPHWSNE | LIAEQLQQQV | SQLQDQLDAE |
| 430 | 440 | 450 | 460 | 470 | 480 |
| LEDKRKVLLE | LSREKAQNED | LKLEVTNILQ | KHKQEVELLQ | NAATISQPPD | RQSEPATHPA |
| 490 | 500 | 510 | 520 | 530 | 540 |
| VLQENTQIEP | SEPKNQEEKK | LSQVLNELQV | SHAETTLELE | KTRDMLILQR | KINVCYQEEL |
| 550 | 560 | 570 | 580 | 590 | 600 |
| EAMMTKADND | NRDHKEKLER | LTRLLDLKNN | RIKQLEGILR | SHDLPTSEQL | KDVAYGTRPL |
| 610 | 620 | 630 | 640 | 650 | 660 |
| SLCLETLPAH | GDEDKVDISL | LHQGENLFEL | HIHQAFLTSA | ALAQAGDTQP | TTFCTYSFYD |
| 670 | 680 | 690 | 700 | 710 | 720 |
| FETHCTPLSV | GPQPLYDFTS | QYVMETDSLF | LHYLQEASAR | LDIHQAMASE | HSTLAAGWIC |
| 730 | 740 | 750 | 760 | 770 | 780 |
| FDRVLETVEK | VHGLATLIGA | GGEEFGVLEY | WMRLRFPIKP | SLQACNKRKK | AQVYLSTDVL |
| 790 | 800 | 810 | 820 | 830 | 840 |
| GGRKAQEEEF | RSESWEPQNE | LWIEITKCCG | LRSRWLGTQP | SPYAVYRFFT | FSDHDTAIIP |
| 850 | 860 | 870 | 880 | 890 | 900 |
| ASNNPYFRDQ | ARFPVLVTSD | LDHYLRREAL | SIHVFDDEDL | EPGSYLGRAR | VPLLPLAKNE |
| 910 | 920 | 930 | 940 | 950 | 960 |
| SIKGDFNLTD | PAEKPNGSIQ | VQLDWKFPYI | PPESFLKPEA | QTKGKDTKDS | SKISSEEEKA |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| SFPSQDQMAS | PEVPIEAGQY | RSKRKPPHGG | ERKEKEHQVV | SYSRRKHGKR | IGVQGKNRME |
| 1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
| YLSLNILNGN | TPEQVNYTEW | KFSETNSFIG | DGFKNQHEEE | EMTLSHSALK | QKEPLHPVND |
| 1090 | 1100 | 1110 | 1120 | 1130 | 1140 |
| KESSEQGSEV | SEAQTTDSDD | VIVPPMSQKY | PKADSEKMCI | EIVSLAFYPE | AEVMSDENIK |
| 1150 | 1160 | 1170 | 1180 | 1190 | 1200 |
| QVYVEYKFYD | LPLSETETPV | SLRKPRAGEE | IHFHFSKVID | LDPQEQQGRR | RFLFDMLNGQ |
| 1210 | 1220 | 1230 | 1240 | 1250 | 1260 |
| DPDQGHLKFT | VVSDPLDEEK | KECEEVGYAY | LQLWQILESG | RDILEQELDI | VSPEDLATPI |
| 1270 | 1280 | ||||
| GRLKVSLQAA | AVLHAIYKEM | TEDLFS |