Q93WD2

PR
Gene name
Lhcb4
Protein name
Chlorophyll a-b binding protein CP29
Names
Lhcbm4
Species
Chlamydomonas reinhardtii (Chlamydomonas smithii)
KEGG Pathway
cre:CHLRE_17g720250v5
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

1-146 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

4 structures for Q93WD2

Entry ID Method Resolution Chain Position Source
6KAC EM 270 A R/r 1-280 PDB
6KAD EM 340 A R/r 1-280 PDB
6KAF EM 373 A R/r 1-280 PDB
AF-Q93WD2-F1 Predicted AlphaFoldDB

No variants for Q93WD2

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q93WD2

No associated diseases with Q93WD2

No regional properties for Q93WD2

Type Name Position InterPro Accession
No domain, repeats, and functional sites for Q93WD2

Functions

Description
EC Number
Subcellular Localization
  • Plastid, chloroplast thylakoid membrane ; Multi-pass membrane protein
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

4 GO annotations of cellular component

Name Definition
integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
photosystem I A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
photosystem II A photosystem that contains a pheophytin-quinone reaction center with associated accessory pigments and electron carriers. In cyanobacteria and chloroplasts, in the presence of light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone, whereas other photosynthetic bacteria carry out anoxygenic photosynthesis and oxidize other compounds to re-reduce the photoreaction center.
thylakoid light-harvesting complex A thylakoid membrane complex of chlorophylls a and b together with chlorophyll a-b binding proteins. In addition, LHCs contain a number of other proteins, the function of which is speculative, together with accessory pigments. The LHCs capture and transfer energy to photosystems I and II. An example of this is found in Arabidopsis thaliana.

2 GO annotations of molecular function

Name Definition
chlorophyll binding Binding to a chlorophyll; a compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment.
metal ion binding Binding to a metal ion.

1 GO annotations of biological process

Name Definition
photosynthesis, light harvesting Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MVFKFPTPPG TQKKAGTTAT KPAPKATTKK VATSTGTRSG GVGYRKYQGD ALWLPNTTRP
70 80 90 100 110 120
EWLDGSLPGD RGFDPLGLSK PSEFVVIGVD ENDQNAAKNN KGSVEAIVQA TPDEVSSENR
130 140 150 160 170 180
LAPYSEVFGL ARFRECELIH GRWAMLACLG ALVAEATTGV SWVEAGKVEL DGASYAGLSL
190 200 210 220 230 240
PFSITQLIWI EVILVGGAEF YRNSETNPEK RCYPGGVFDP LKLASEDEER AFRLKTAEIK
250 260 270
HARLAMVSFF GYGVQALSTG EGALGSLAKF ADGLNNGKGL