Q93VJ4
Gene name |
BEE2 (BHLH58, EN80, At4g36540, AP22.3) |
Protein name |
Transcription factor BEE 2 |
Names |
Basic helix-loop-helix protein 58, AtbHLH58, bHLH 58, Protein Brassinosteroid enhanced expression 2, Transcription factor EN 80, bHLH transcription factor bHLH058 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT4G36540 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q93VJ4
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q93VJ4-F1 | Predicted | AlphaFoldDB |
22 variants for Q93VJ4
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_4_17243705_T_A | 3 | L>M | No | 1000Genomes | |
| tmp_4_17243744_C_G | 16 | Q>E | No | 1000Genomes | |
| tmp_4_17243756_C_G | 20 | P>A | No | 1000Genomes | |
| tmp_4_17243858_T_C | 54 | F>L | No | 1000Genomes | |
| tmp_4_17243930_C_T | 78 | P>S | No | 1000Genomes | |
| ENSVATH00555331 | 85 | S>N | Plants were checked bi-weekly for presence of first buds and the average flowering time of 4 plants of the same accession were collected [22c and 16 hrs daylight] [EnsemblGenome] | No | 1000Genomes |
| ENSVATH02966262 | 100 | T>K | No | 1000Genomes | |
| ENSVATH02966263 | 105 | K>E | No | 1000Genomes | |
| tmp_4_17244167_G_C,A | 128 | E>D | No | 1000Genomes | |
| ENSVATH14346887 | 138 | Y>C | No | 1000Genomes | |
| ENSVATH14346888 | 162 | K>N | No | 1000Genomes | |
| tmp_4_17244431_A_T | 186 | M>L | No | 1000Genomes | |
| tmp_4_17244489_C_G | 205 | S>W | No | 1000Genomes | |
| ENSVATH00555333 | 237 | G>A | Plants were checked bi-weekly for presence of first buds and the average flowering time of 4 plants of the same accession were collected [22c and 16 hrs daylight] Plants were checked bi-weekly for presence of first buds and the average flowering time of 4 plants of the same accession were collected [16c and 16 hrs daylight] Plants were checked bi-weekly for presence of first buds and the average leaf number at flowering time of 4 plants of the same accession were collected [16c and 16 hrs daylight] Flowering time was scored as the number of days between germination date and appearance of the first flower [growth in field with natural light and started in october] [EnsemblGenome] | No | 1000Genomes |
| ENSVATH06836888 | 248 | R>W | No | 1000Genomes | |
| tmp_4_17244722_C_T | 255 | Q>* | No | 1000Genomes | |
| ENSVATH06836890 | 261 | S>* | No | 1000Genomes | |
| ENSVATH06836890 | 261 | S>L | No | 1000Genomes | |
| ENSVATH12435219 | 267 | H>N | No | 1000Genomes | |
| ENSVATH06836891 | 268 | T>N | No | 1000Genomes | |
| ENSVATH00555334 | 272 | G>C | No | 1000Genomes | |
| ENSVATH00555336 | 284 | H>Q | No | 1000Genomes |
No associated diseases with Q93VJ4
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| DNA-binding transcription factor activity | A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. |
| protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| DNA-templated transcription | The synthesis of an RNA transcript from a DNA template. |
| negative regulation of innate immune response | Any process that stops, prevents, or reduces the frequency, rate or extent of the innate immune response. |
| regulation of DNA-templated transcription | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9ZPW3 | HBI1 | Transcription factor HBI1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDLSVLDRLK | WLQQQQMVSP | EFLQILGSDG | REELKRVESY | LGNNNDELQS | FRHFPEFGPD |
| 70 | 80 | 90 | 100 | 110 | 120 |
| YDTTDGCISR | TSSFHMEPVK | NNGHSRAITL | QNKRKPEGKT | EKREKKKIKA | EDETEPSMKG |
| 130 | 140 | 150 | 160 | 170 | 180 |
| KSNMSNTETS | SEIQKPDYIH | VRARRGEATD | RHSLAERARR | EKISKKMKCL | QDIVPGCNKV |
| 190 | 200 | 210 | 220 | 230 | 240 |
| TGKAGMLDEI | INYVQSLQQQ | VEFLSMKLSV | INPELECHID | DLSAKQFQAY | FTGPPEGDSK |
| 250 | 260 | 270 | 280 | 290 | 300 |
| QSIMADFRSF | PLHQQGSLDY | SVINSDHTTS | LGAKDHTSSS | WETHSQCLYN | SLRTDSVSNF |
| FSLK |