Q92HF4
Gene name |
nusA |
Protein name |
Transcription termination/antitermination protein NusA |
Names |
|
Species |
Rickettsia conorii (strain ATCC VR-613 / Malish 7) |
KEGG Pathway |
rco:RC0817 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q92HF4
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q92HF4-F1 | Predicted | AlphaFoldDB |
No variants for Q92HF4
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q92HF4 | |||||
No associated diseases with Q92HF4
7 regional properties for Q92HF4
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | S1 domain | 135 - 203 | IPR003029 |
| domain | K Homology domain | 307 - 380 | IPR004087 |
| domain | Transcription termination factor NusA | 8 - 349 | IPR010213 |
| repeat | Transcription termination factor NusA, C-terminal duplication | 371 - 420 | IPR010214 |
| domain | Transcription factor NusA, N-terminal | 8 - 128 | IPR013735 |
| domain | RNA-binding domain, S1 | 137 - 203 | IPR022967 |
| domain | KH domain, NusA-like | 233 - 294 | IPR025249 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA-binding transcription factor activity | A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. |
| nucleotide binding | Binding to a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| DNA-templated transcription termination | The completion of transcription: the RNA polymerase pauses, the RNA-DNA hybrid dissociates, followed by the release of the RNA polymerase from its DNA template. |
| transcription antitermination | Regulation of transcription by a mechanism that allows RNA polymerase to continue transcription beyond termination site(s). |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSNIGNVEIL | QIIDSVAREK | GISKEILIST | VEQAVQAAGR | KKYGNEYDIK | AQINRKTGEI |
| 70 | 80 | 90 | 100 | 110 | 120 |
| NLLRILKIVE | DVEDYLTQIS | LEEALIKNPE | AKIGDEIYEY | LPPIDHARVS | AQAAKQVITQ |
| 130 | 140 | 150 | 160 | 170 | 180 |
| RVIEAEREKQ | YHDFKDRKGE | IINGIVKRIE | YGDIIVDLSR | AEAIIKKDQL | IKGENFKPND |
| 190 | 200 | 210 | 220 | 230 | 240 |
| RIKAYVQDVR | QETKGPQIFL | SRVDNQMLVK | LFKLEVPEIL | ESIIQIKSVA | RDPGSKAKIA |
| 250 | 260 | 270 | 280 | 290 | 300 |
| VFAADSSIDP | VGSCVGIRGN | RVKAVTNELN | GEKIDIVLWS | NDLAQFIVNA | LAPLAPGEIT |
| 310 | 320 | 330 | 340 | 350 | 360 |
| KILIDEDRHK | VEVVVSQENQ | SIAIGRRGQN | VRLASQLTGW | NIDIMTEEQE | SKRRNEEFLT |
| 370 | 380 | 390 | 400 | 410 | 420 |
| STALFMEALD | VEEVIGQLLS | VTGFNSVEQI | ASSEISTLTR | IEGFEEELAV | EIKNRAINYV |
| 430 | 440 | 450 | 460 | 470 | 480 |
| DLKNEKIIKK | LEDLGVEQEL | IDILELSLEL | ILQFAEYGIK | TIEDLGEMSV | NEFKNLAPNS |
| 490 | 500 | ||||
| NITDENIKLL | IKTARQHGAL | KDS |