Q92368

PR
Gene name
rcd1 (SPAC29B12.06c)
Protein name
Cell differentiation protein rcd1
Names
Species
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
KEGG Pathway
spo:SPAC29B12.06c
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

1-105 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q92368

Entry ID Method Resolution Chain Position Source
AF-Q92368-F1 Predicted AlphaFoldDB

2 variants for Q92368

Variant ID(s) Position Change Description Diseaes Association Provenance
I_5418208_C_T 202 A>T No Jeffares_SNPs
I_5418049_C_T 255 A>T No Jeffares_SNPs

No associated diseases with Q92368

No regional properties for Q92368

Type Name Position InterPro Accession
No domain, repeats, and functional sites for Q92368

Functions

Description
EC Number
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

6 GO annotations of cellular component

Name Definition
CCR4-NOT complex The Ccr4-Not complex is an eukaryotically conserved deadenylase that can initiate cytoplasmic mRNA decay, and reduce translation by releasing poly(A)-binding protein (Pab1/PABPC1). Ccr4-Not contains seven core subunits, including two poly(A)-specific exonucleases, Ccr4/CNOT6/CNOT6L and Caf1/Pop2/CNOT7/CNOT8.
CCR4-NOT core complex The core of the CCR4-NOT complex. In Saccharomyces the CCR4-NOT core complex comprises Ccr4p, Caf1p, Caf40p, Caf130p, Not1p, Not2p, Not3p, Not4p, and Not5p.
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Mei2 nuclear dot complex A ribonucleoprotein complex that forms during meiotic prophase in a fixed position in the horsetail nucleus; contains Mei2 and meiRNA. May play a role in the progression of meiosis I.
nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
P-body A focus in the cytoplasm where mRNAs may become inactivated by decapping or some other mechanism. Protein and RNA localized to these foci are involved in mRNA degradation, nonsense-mediated mRNA decay (NMD), translational repression, and RNA-mediated gene silencing.

1 GO annotations of molecular function

Name Definition
RNA binding Binding to an RNA molecule or a portion thereof.

4 GO annotations of biological process

Name Definition
cell differentiation The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.
homologous chromosome pairing at meiosis The meiotic cell cycle process where side by side pairing and physical juxtaposition of homologous chromosomes is created during meiotic prophase. Homologous chromosome pairing begins when the chromosome arms begin to pair from the clustered telomeres and ends when synaptonemal complex or linear element assembly is complete.
negative regulation of translation Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
nuclear-transcribed mRNA poly(A) tail shortening Shortening of the poly(A) tail of a nuclear-transcribed mRNA from full length to an oligo(A) length.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MENLESPNYE PALVYEWIIQ LVSGTSREQA LVELSRKREQ YEDLALILWH SYGVMTALLQ
70 80 90 100 110 120
EIISVYPLLN PPTLTGPTSN RVCNALALLQ CIASHPETRI HFLNAHITLF LYPFLNTLSK
130 140 150 160 170 180
SKPFEYLRLT SLGVIGALVK NDSPEVINFL LSTEIIPLCL RIMENGSELS KTVAIFIVQK
190 200 210 220 230 240
FLCDDVGLQY ICQTYERFYA VASVLNNMVM QLVDSFAFRL LKHVIRCYLR LSDNPRAREA
250 260 270 280
LRHCLPEPLR DATFAQVLKD DHNTKKCLAQ LLINLSDVAV VNQ