Q8Y7M8
Gene name |
dbpA |
Protein name |
ATP-dependent RNA helicase DbpA |
Names |
|
Species |
Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) |
KEGG Pathway |
lmo:lmo1246 |
EC number |
3.6.4.13: Acting on ATP; involved in cellular and subcellular movement |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q8Y7M8
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q8Y7M8-F1 | Predicted | AlphaFoldDB |
No variants for Q8Y7M8
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q8Y7M8 | |||||
No associated diseases with Q8Y7M8
1 regional properties for Q8Y7M8
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| active_site | Diaminopimelate epimerase, active site | 66 - 80 | IPR018510 |
Functions
| Description | ||
|---|---|---|
| EC Number | 3.6.4.13 | Acting on ATP; involved in cellular and subcellular movement |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
6 GO annotations of molecular function
| Name | Definition |
|---|---|
| 3'-5' RNA helicase activity | Unwinding of an RNA helix in the 3' to 5' direction, driven by ATP hydrolysis. |
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| ATP hydrolysis activity | Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
| RNA helicase activity | Unwinding of an RNA helix, driven by ATP hydrolysis. |
| RNA strand annealing activity | An activity that facilitates the formation of a complementary double-stranded RNA molecule. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| ribosomal large subunit assembly | The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the large ribosomal subunit. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MNNLKLSEEI | KRAINELGYT | EATPVQKAVI | PVALTGEDIV | AKSQTGSGKT | AAFAIPIAEQ |
| 70 | 80 | 90 | 100 | 110 | 120 |
| VEWEENKPQA | LIIVPTRELA | MQVKTECTNI | GRFKRVKAAA | IYGQSPFAKQ | KLELSQKNHI |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VVGTPGRLLD | HIEKGSLNVD | KVAHLVLDEV | DEMLSMGFID | QVEDILSRLP | KQRQNLFFSA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| TMPEEMQDLI | KRYQDNPMVI | EMASEKTNPI | FHVEMQTDNK | EKTLKDVLIT | ENPDSAIIFC |
| 250 | 260 | 270 | 280 | 290 | 300 |
| NTKNQVDELT | DLLDVKASKI | HGGLRQEDRF | RAMDDFKSGK | SRFLIATDVA | GRGIDVDNVS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| LVINYDLPIE | KENYVHRIGR | TGRAGKSGKA | ISFVKTNENP | LLRDIEEMLD | VTIEKKRKPT |
| 370 | 380 | 390 | 400 | 410 | 420 |
| VIEVKVNEDA | FRKKQQKRPT | IKKARGEKLN | KNIMKLYFNG | GKKKKIRAVD | FVGTISKLEG |
| 430 | 440 | 450 | 460 | ||
| ITAEDIGIIT | IEDHVSFVEI | LNGKGPAVLE | MMRSRKVKGR | RLKVNEARKR |