Q8WVV9
Gene name |
HNRNPLL (HNRPLL, SRRF, BLOCK24) |
Protein name |
Heterogeneous nuclear ribonucleoprotein L-like |
Names |
hnRNPLL, Stromal RNA-regulating factor |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:92906 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
2 structures for Q8WVV9
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 7EVS | X-ray | 160 A | A/B | 166-268 | PDB |
| AF-Q8WVV9-F1 | Predicted | AlphaFoldDB |
309 variants for Q8WVV9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| rs1558552719 | 2 | S>L | No | Ensembl | |
|
rs912262575 CA45568265 |
4 | S>F | No |
ClinGen gnomAD |
|
|
rs935944336 CA346334062 |
5 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs935944336 CA45568242 |
5 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs777409709 CA1621314 |
5 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs935944336 CA346334064 |
5 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA45568241 rs932467274 |
6 | S>F | No |
ClinGen Ensembl |
|
|
rs1193943120 CA346334058 |
6 | S>P | No |
ClinGen gnomAD |
|
|
rs752493519 CA1621312 |
8 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA346334028 rs1221261988 |
8 | P>R | No |
ClinGen gnomAD |
|
|
rs370953081 CA1621310 |
9 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA346334019 rs1238536810 |
9 | R>K | No |
ClinGen gnomAD |
|
|
rs751549868 CA1621309 |
10 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA1621308 rs34376380 |
11 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs867982857 CA45568207 |
12 | Y>* | No |
ClinGen Ensembl |
|
|
CA45568215 rs868435917 |
12 | Y>D | No |
ClinGen Ensembl |
|
|
rs1412420324 CA346333971 |
13 | E>K | No |
ClinGen TOPMed |
|
|
rs1365716089 CA346333957 |
14 | E>K | No |
ClinGen gnomAD |
|
|
rs1293118955 CA346333940 |
15 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1435526379 CA346333918 |
16 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1435526379 CA346333922 |
16 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs763140437 CA1621307 |
16 | R>W | No |
ClinGen ExAC TOPMed |
|
|
rs773498370 CA346333902 |
17 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs978039270 CA45568179 |
20 | S>N | No |
ClinGen Ensembl |
|
|
rs1417778534 CA346333847 |
21 | Q>R | No |
ClinGen gnomAD |
|
|
CA346333798 rs1422663049 |
25 | L>F | No |
ClinGen gnomAD |
|
|
CA346333771 rs1190227721 |
27 | T>A | No |
ClinGen gnomAD |
|
|
rs1475953643 CA346333763 |
27 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA346333745 rs1198914628 |
29 | E>K | No |
ClinGen TOPMed |
|
|
CA346333714 rs866020503 |
30 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
CA45568173 rs866020503 |
30 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs776905093 CA1621303 |
32 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1621300 rs151266835 |
35 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1621298 rs748865606 |
37 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1279841573 CA346333588 |
37 | E>V | No |
ClinGen gnomAD |
|
|
rs144672094 CA1621296 |
40 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA346333496 rs1296153851 |
41 | N>K | No |
ClinGen TOPMed |
|
|
CA346333492 rs1303322228 |
42 | R>G | No |
ClinGen gnomAD |
|
|
rs1356876923 CA346333477 |
43 | R>W | No |
ClinGen gnomAD |
|
|
CA45568137 rs867840024 |
46 | T>R | No |
ClinGen Ensembl |
|
|
rs1174922308 CA346333412 |
46 | T>S | No |
ClinGen gnomAD |
|
|
CA1621295 rs752506334 |
47 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1426309027 CA346333391 |
47 | P>L | No |
ClinGen gnomAD |
|
|
CA45568111 rs752506334 |
47 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA346333388 rs1191914616 |
48 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA346333369 rs895287117 |
49 | G>D | No |
ClinGen gnomAD |
|
|
CA346333383 rs1400514291 |
49 | G>S | No |
ClinGen TOPMed |
|
|
CA45568087 rs895287117 |
49 | G>V | No |
ClinGen gnomAD |
|
|
CA346333334 rs1184048542 |
50 | G>E | No |
ClinGen gnomAD |
|
|
rs780814995 CA1621294 |
50 | G>W | No |
ClinGen ExAC gnomAD |
|
|
CA1621293 rs571556070 |
51 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs751487477 CA1621292 |
52 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA346333267 rs1205556912 |
53 | G>D | No |
ClinGen gnomAD |
|
|
CA45568022 rs368933037 |
54 | G>S | No |
ClinGen Ensembl |
|
|
rs547178507 CA1621291 |
55 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA346333213 rs1236900168 |
56 | G>C | No |
ClinGen TOPMed |
|
|
rs1216608754 CA346333164 |
58 | R>L | No |
ClinGen gnomAD |
|
|
CA45568017 rs995689551 |
58 | R>W | No |
ClinGen TOPMed |
|
|
CA45568013 rs78288295 |
59 | S>G | No |
ClinGen Ensembl |
|
|
rs763117893 CA1621289 |
59 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1045432768 CA346333115 |
60 | F>C | No |
ClinGen TOPMed gnomAD |
|
|
CA45568010 rs1045432768 |
60 | F>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1037292191 CA45568000 |
61 | S>F | No |
ClinGen Ensembl |
|
|
rs1397642487 CA346333082 |
62 | Q>* | No |
ClinGen gnomAD |
|
|
CA346333074 rs1455326585 |
62 | Q>P | No |
ClinGen TOPMed |
|
|
CA346333065 rs1376426310 |
63 | P>L | No |
ClinGen gnomAD |
|
|
rs944080276 CA45598916 |
64 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA1621254 rs780031410 |
65 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1298084635 CA346340087 |
66 | G>V | No |
ClinGen gnomAD |
|
|
CA1621253 rs758298197 |
68 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA346340067 rs1572457261 |
69 | H>Q | No |
ClinGen Ensembl |
|
|
CA346340070 rs1404359266 |
69 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1281480223 CA346340071 |
69 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs778921508 CA1621251 |
70 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA1621252 rs745750618 |
70 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA1621250 rs757215824 |
71 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA1621247 rs756368571 |
76 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA1621248 rs756368571 |
76 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA45598834 rs889887116 |
77 | V>I | No |
ClinGen gnomAD |
|
|
CA1621244 rs759911825 |
78 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA346340012 rs1572457165 |
79 | H>Y | No |
ClinGen Ensembl |
|
|
CA45598825 rs914166035 |
80 | V>I | No |
ClinGen TOPMed |
|
| TCGA novel | 82 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1049907986 CA45598792 |
84 | C>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1220883812 CA346339975 |
85 | E>* | No |
ClinGen gnomAD |
|
|
rs761212737 CA1621241 |
92 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs760360255 CA1621238 |
93 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA346339908 rs771934966 |
95 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1621236 rs771934966 |
95 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 97 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA346339889 rs1263863764 |
98 | K>R | No |
ClinGen TOPMed |
|
|
CA346339864 rs1167331802 |
102 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA346339615 rs1436963029 |
103 | C>W | No |
ClinGen gnomAD |
|
|
rs769801828 CA1621211 |
106 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs781381969 CA1621209 |
110 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs755239916 CA1621208 |
119 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA346339492 rs1573744257 |
120 | N>K | No |
ClinGen Ensembl |
|
|
CA1621207 rs751836899 |
121 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1225570247 CA346339479 |
122 | D>E | No |
ClinGen gnomAD |
|
|
rs1370695049 CA346339469 |
124 | A>S | No |
ClinGen TOPMed |
|
|
CA1621206 rs780421383 |
124 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA346339451 rs1245342571 |
126 | E>A | No |
ClinGen gnomAD |
|
|
rs1573744189 CA346339433 |
129 | T>A | No |
ClinGen Ensembl |
|
|
rs750884655 CA1621204 |
132 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA45592489 rs750105071 |
133 | D>V | No |
ClinGen Ensembl |
|
|
rs1214589397 CA346339398 |
134 | E>G | No |
ClinGen gnomAD |
|
|
rs760256086 CA1621202 |
135 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs994588851 CA346339388 |
136 | V>L | No |
ClinGen gnomAD |
|
|
rs994588851 CA45592459 |
136 | V>M | No |
ClinGen gnomAD |
|
|
CA1621200 rs571147779 |
137 | Y>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA346339364 rs1281112246 |
140 | G>S | No |
ClinGen gnomAD |
|
|
rs1404296319 CA346339349 |
142 | Q>E | No |
ClinGen gnomAD |
|
|
CA45592446 rs559272588 |
145 | F>L | No |
ClinGen Ensembl |
|
|
CA1621198 rs377705288 |
148 | S>C | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1396328198 CA346339089 |
158 | N>T | No |
ClinGen TOPMed |
|
|
rs773133460 CA346339082 |
159 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA346339083 rs773133460 |
159 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773133460 CA1621195 |
159 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1176124784 CA346339061 |
162 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA1621194 rs373372529 |
163 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 163 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1621193 rs748207410 |
164 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs143675691 CA1621192 |
167 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs768647249 CA1621191 |
171 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 171 | L>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs147915360 CA45592316 |
173 | I>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA1621188 rs779130914 |
176 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779130914 CA346338974 |
176 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1280020338 CA346338952 |
180 | I>V | No |
ClinGen gnomAD |
|
|
rs1477110409 CA346338938 |
182 | V>L | No |
ClinGen TOPMed |
|
|
CA346338912 rs1296776902 |
184 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs531585258 CA1621169 |
184 | V>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs140773144 CA1621167 |
186 | Y>C | No |
ClinGen ESP ExAC gnomAD |
|
|
CA346338894 rs1167454031 |
187 | T>A | No |
ClinGen gnomAD |
|
| TCGA novel | 189 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1384680310 CA346338825 |
197 | R>C | No |
ClinGen gnomAD |
|
|
rs183955948 CA45590296 |
200 | I>T | No |
ClinGen 1000Genomes gnomAD |
|
|
rs1179557809 CA346338806 |
200 | I>V | No |
ClinGen gnomAD |
|
| TCGA novel | 201 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779381813 CA1621166 |
201 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs1193888971 CA346338776 |
204 | N>S | No |
ClinGen gnomAD |
|
|
CA1621165 rs757719424 |
205 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs17856242 CA45590262 |
210 | V>L | No |
ClinGen Ensembl |
|
|
rs1258586699 CA346338688 |
213 | E>D | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 215 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA346338635 rs1253605677 |
221 | A>G | No |
ClinGen TOPMed |
|
|
rs1303830695 CA346338611 |
224 | A>V | No |
ClinGen gnomAD |
|
|
rs781094191 CA45587927 |
225 | L>F | No |
ClinGen Ensembl |
|
|
CA45587919 rs781094191 |
225 | L>I | No |
ClinGen Ensembl |
|
|
CA1621147 rs749739482 |
226 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA346338574 rs1299292619 |
230 | I>T | No |
ClinGen gnomAD |
|
|
CA1621146 rs778332780 |
232 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1621145 rs369142294 |
236 | T>P | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 239 | I>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs376506009 CA1621142 |
239 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs117385826 CA1621141 |
241 | Y>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1479304497 CA346338504 |
241 | Y>H | No |
ClinGen gnomAD |
|
|
CA1621140 rs778538316 |
243 | R>W | No |
ClinGen ExAC gnomAD |
|
| rs771501973 | 244 | P>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs745446803 CA1621123 |
245 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778522057 CA1621122 |
245 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs756950536 CA1621121 |
246 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1621120 rs201857398 |
250 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1444532545 CA346338415 COSM477391 |
253 | D>G | kidney [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA1621119 rs777383390 |
254 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755951753 CA1621118 |
256 | S>I | No |
ClinGen ExAC gnomAD |
|
|
CA346338389 rs1452171877 |
257 | W>R | No |
ClinGen gnomAD |
|
|
rs1405145354 CA346338360 |
260 | T>S | No |
ClinGen gnomAD |
|
|
rs1331750923 CA346338357 |
261 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
COSM721034 rs752512010 CA1621117 |
262 | P>Q | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA346338348 rs1411410901 |
262 | P>S | No |
ClinGen gnomAD |
|
|
CA346338340 rs1472844186 |
263 | Y>C | No |
ClinGen gnomAD |
|
|
CA346338331 rs1181435907 |
264 | L>F | No |
ClinGen gnomAD |
|
|
rs546549191 CA1621115 |
265 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA346338317 rs1233425058 |
267 | R>* | No |
ClinGen TOPMed |
|
| TCGA novel | 267 | R>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs751741171 CA1621114 |
267 | R>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 268 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1573732507 CA346338178 |
271 | K>R | No |
ClinGen Ensembl |
|
|
rs201793133 CA1621082 |
272 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1362100273 CA346338170 |
272 | G>V | No |
ClinGen gnomAD |
|
|
CA1621081 rs769538008 |
273 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs747866161 CA1621080 |
273 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781098678 CA1621079 |
274 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA1621078 rs754847535 |
275 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA346338151 rs1471164058 |
276 | Q>K | No |
ClinGen gnomAD |
|
|
CA346338138 rs1427636811 |
278 | I>L | No |
ClinGen gnomAD |
|
|
rs1421794824 CA346338111 |
281 | E>D | No |
ClinGen gnomAD |
|
|
rs1238270554 CA346338083 |
286 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA346338072 rs1205799316 |
287 | R>I | No |
ClinGen TOPMed gnomAD |
|
|
CA346338073 rs1205799316 |
287 | R>T | No |
ClinGen TOPMed gnomAD |
|
|
rs757538544 CA1621072 |
288 | H>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757538544 CA346338066 |
288 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1621071 rs754089876 |
289 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA346338053 rs1377025635 |
290 | G>S | No |
ClinGen TOPMed |
|
|
CA346338050 rs1397856120 |
290 | G>V | No |
ClinGen TOPMed |
|
|
CA1621069 rs761032016 |
291 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1480251973 CA346337981 |
299 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA346337965 rs1481434300 |
301 | P>R | No |
ClinGen TOPMed |
|
|
CA1621037 rs771793093 |
303 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs745768434 CA1621036 |
303 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774169128 CA1621035 |
305 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1160650343 CA346337932 |
306 | M>I | No |
ClinGen TOPMed |
|
|
CA45578739 rs958788256 |
306 | M>T | No |
ClinGen gnomAD |
|
|
CA346337927 rs1166474299 |
307 | G>D | No |
ClinGen gnomAD |
|
|
CA346337916 rs1305266521 |
309 | R>Q | No |
ClinGen gnomAD |
|
| TCGA novel | 310 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA346337912 rs1391138553 |
310 | D>H | No |
ClinGen gnomAD |
|
|
CA346337900 rs1346719202 |
311 | T>I | No |
ClinGen gnomAD |
|
| TCGA novel | 312 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1621031 rs756370435 |
314 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs900020582 CA45578705 |
318 | P>L | No |
ClinGen TOPMed |
|
|
rs781575334 CA1621029 |
322 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA346337823 rs1365365179 |
323 | S>F | No |
ClinGen gnomAD |
|
|
rs755316109 CA1621028 |
325 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA1621026 rs766858328 |
326 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA346337803 rs1558532350 COSM3364738 |
327 | M>V | kidney upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA1621023 rs763806161 |
330 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA1621022 rs760362290 |
332 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA1621021 rs775026602 |
337 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA1621020 rs767284751 |
340 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1238794229 CA346337717 |
340 | S>N | No |
ClinGen gnomAD |
|
|
CA346337716 rs1238794229 |
340 | S>T | No |
ClinGen gnomAD |
|
|
rs1222209155 CA346337657 |
348 | N>S | No |
ClinGen gnomAD |
|
|
rs749336729 CA1621016 |
354 | N>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 364 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA346337543 rs1358384619 |
364 | K>T | No |
ClinGen TOPMed |
|
| TCGA novel | 366 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 370 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs762830270 CA1620997 |
371 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1343154442 CA346337295 |
372 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs906363736 CA45575345 |
373 | G>A | No |
ClinGen Ensembl |
|
|
CA346337271 rs1558530257 |
376 | L>P | No |
ClinGen Ensembl |
|
|
rs769801749 CA1620995 |
376 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA346337251 rs1417764813 |
379 | M>R | No |
ClinGen TOPMed |
|
|
CA1620994 rs761869097 |
381 | D>E | No |
ClinGen ExAC TOPMed |
|
|
rs1337604188 CA346337132 |
396 | K>T | No |
ClinGen gnomAD |
|
| TCGA novel | 399 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1044837527 CA45575323 |
400 | K>R | No |
ClinGen gnomAD |
|
|
rs1327280022 CA346337090 |
402 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs573338738 CA45575318 |
403 | N>S | No |
ClinGen 1000Genomes gnomAD |
|
|
rs142463240 CA1620974 |
406 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs761933978 CA1620973 |
409 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA1620971 rs768814425 |
410 | H>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760762346 CA346337023 |
410 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA346337026 rs1411894978 |
410 | H>R | No |
ClinGen gnomAD |
|
|
CA1620972 rs768814425 |
410 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA346337017 rs1259227536 |
411 | S>* | No |
ClinGen TOPMed |
|
|
CA45574890 rs989747207 |
412 | V>F | No |
ClinGen gnomAD |
|
|
CA346336998 rs1558529872 |
415 | S>G | No |
ClinGen Ensembl |
|
|
rs746301417 CA1620967 |
415 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1620966 rs779540290 |
421 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA346336953 rs1286558693 |
421 | E>V | No |
ClinGen gnomAD |
|
|
CA1620963 rs201359399 |
426 | S>N | No |
ClinGen 1000Genomes ExAC |
|
| TCGA novel | 428 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs528598711 CA1620960 |
432 | M>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 436 | N>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1435080754 CA346336832 |
437 | R>H | No |
ClinGen gnomAD |
|
|
CA346336802 rs1192274309 |
441 | A>V | No |
ClinGen TOPMed |
|
| TCGA novel | 442 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1620958 rs750272113 |
445 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs1177839090 CA346336733 |
451 | P>L | No |
ClinGen gnomAD |
|
|
rs1244070600 CA346336687 |
458 | Y>C | No |
ClinGen gnomAD |
|
|
CA346336678 rs1373667313 |
459 | Y>C | No |
ClinGen TOPMed |
|
|
rs1267220455 CA346336667 |
461 | V>I | No |
ClinGen gnomAD |
|
|
rs140798886 COSM107735 CA45574783 |
462 | P>S | skin [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs759947677 CA1620950 |
464 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs754343521 CA1620949 |
466 | T>K | No |
ClinGen ExAC gnomAD |
|
|
rs1271641626 CA346336593 |
468 | E>Q | No |
ClinGen gnomAD |
|
|
CA346336577 rs1219242053 |
469 | T>S | No |
ClinGen gnomAD |
|
|
rs1337828229 CA346336555 |
471 | T>R | No |
ClinGen gnomAD |
|
|
rs1181626565 CA346336552 |
472 | K>E | No |
ClinGen Ensembl |
|
|
CA346336463 rs1440012990 |
474 | C>F | No |
ClinGen TOPMed |
|
|
rs1446292148 CA346336436 |
476 | D>E | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 476 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs763439144 CA1620928 |
477 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA346336400 rs1331719915 |
480 | L>F | No |
ClinGen TOPMed |
|
|
rs770378810 CA1620926 |
481 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770378810 CA346336389 |
481 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746496249 CA1620925 |
482 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs374014442 CA1620921 |
483 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1620923 rs200810217 |
483 | I>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1620922 rs200810217 |
483 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1620924 rs774945614 |
483 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA1620920 rs756999172 |
484 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1224633389 CA346336286 |
490 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA346336240 rs1354991072 |
492 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1376176575 CA346336270 |
492 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA1620903 rs771506090 |
493 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs1285299318 CA346336198 |
497 | L>I | No |
ClinGen gnomAD |
|
|
CA346336150 rs1454169605 |
502 | E>K | No |
ClinGen gnomAD |
|
|
CA346336128 rs1410627318 |
503 | W>* | No |
ClinGen TOPMed |
|
|
rs770667012 CA1620900 |
507 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs748923432 CA1620899 |
507 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748923432 CA346336087 |
507 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1620897 rs769722664 |
508 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs748030288 CA1620896 |
510 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs781342208 CA1620894 |
514 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA346336040 rs1205353035 |
515 | A>V | No |
ClinGen gnomAD |
|
|
CA346336012 rs1487079226 |
519 | Y>C | No |
ClinGen gnomAD |
|
|
CA1620892 rs751705724 |
520 | Q>H | No |
ClinGen ExAC gnomAD |
|
| rs138662849 | 524 | P>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM1020821 CA1620891 rs780103102 |
524 | P>L | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA346335482 rs1360076673 |
530 | Y>C | No |
ClinGen gnomAD |
|
|
CA1620869 rs780137207 |
531 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1620866 rs779174502 |
533 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA346335448 rs1285760199 |
535 | C>* | No |
ClinGen gnomAD |
|
|
CA1620865 rs376909218 |
535 | C>F | No |
ClinGen ESP ExAC gnomAD |
|
|
CA346335420 rs1339810228 |
540 | S>A | No |
ClinGen gnomAD |
No associated diseases with Q8WVV9
8 regional properties for Q8WVV9
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | RNA recognition motif domain | 76 - 150 | IPR000504-1 |
| domain | RNA recognition motif domain | 167 - 240 | IPR000504-2 |
| domain | RNA recognition motif domain | 335 - 409 | IPR000504-3 |
| domain | PTBP1-like, RNA recognition motif 2 | 165 - 243 | IPR021790 |
| domain | hnRPLL, RNA recognition motif 3 | 336 - 409 | IPR034983 |
| domain | hnRPLL, RNA recognition motif 1 | 73 - 156 | IPR034985 |
| domain | hnRPLL, RNA recognition motif 2 | 165 - 260 | IPR034986 |
| domain | hnRPLL, RNA recognition motif 4 | 452 - 536 | IPR034987 |
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| ribonucleoprotein complex | A macromolecular complex that contains both RNA and protein molecules. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| mRNA binding | Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| mRNA processing | Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. |
| positive regulation of RNA splicing | Any process that activates or increases the frequency, rate or extent of RNA splicing. |
| regulation of RNA splicing | Any process that modulates the frequency, rate or extent of RNA splicing, the process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P26599 | PTBP1 | Polypyrimidine tract-binding protein 1 | Homo sapiens (Human) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSSSSSSPRE | TYEEDREYES | QAKRLKTEEG | EIDYSAEEGE | NRREATPRGG | GDGGGGGRSF |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SQPEAGGSHH | KVSVSPVVHV | RGLCESVVEA | DLVEALEKFG | TICYVMMMPF | KRQALVEFEN |
| 130 | 140 | 150 | 160 | 170 | 180 |
| IDSAKECVTF | AADEPVYIAG | QQAFFNYSTS | KRITRPGNTD | DPSGGNKVLL | LSIQNPLYPI |
| 190 | 200 | 210 | 220 | 230 | 240 |
| TVDVLYTVCN | PVGKVQRIVI | FKRNGIQAMV | EFESVLCAQK | AKAALNGADI | YAGCCTLKIE |
| 250 | 260 | 270 | 280 | 290 | 300 |
| YARPTRLNVI | RNDNDSWDYT | KPYLGRRDRG | KGRQRQAILG | EHPSSFRHDG | YGSHGPLLPL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| PSRYRMGSRD | TPELVAYPLP | QASSSYMHGG | NPSGSVVMVS | GLHQLKMNCS | RVFNLFCLYG |
| 370 | 380 | 390 | 400 | 410 | 420 |
| NIEKVKFMKT | IPGTALVEMG | DEYAVERAVT | HLNNVKLFGK | RLNVCVSKQH | SVVPSQIFEL |
| 430 | 440 | 450 | 460 | 470 | 480 |
| EDGTSSYKDF | AMSKNNRFTS | AGQASKNIIQ | PPSCVLHYYN | VPLCVTEETF | TKLCNDHEVL |
| 490 | 500 | 510 | 520 | 530 | 540 |
| TFIKYKVFDA | KPSAKTLSGL | LEWECKTDAV | EALTALNHYQ | IRVPNGSNPY | TLKLCFSTSS |
| HL |