Q8TRT5

PR
Gene name
rps4e
Protein name
30S ribosomal protein S4e
Names
Species
Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
KEGG Pathway
mac:MA_1084
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

1-60 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q8TRT5

Entry ID Method Resolution Chain Position Source
AF-Q8TRT5-F1 Predicted AlphaFoldDB

No variants for Q8TRT5

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q8TRT5

No associated diseases with Q8TRT5

6 regional properties for Q8TRT5

Type Name Position InterPro Accession
domain RNA-binding S4 domain 47 - 85 IPR002942
domain KOW 167 - 194 IPR005824
domain Ribosomal protein S4e, N-terminal 3 - 32 IPR013843
domain Ribosomal protein S4e, central region 91 - 162 IPR013845
conserved_site Ribosomal protein S4e, N-terminal, conserved site 3 - 17 IPR018199
domain Ribosomal protein S4, KOW domain 168 - 221 IPR041982

Functions

Description
EC Number
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
cytosolic small ribosomal subunit The small subunit of a ribosome located in the cytosol.

3 GO annotations of molecular function

Name Definition
RNA binding Binding to an RNA molecule or a portion thereof.
rRNA binding Binding to a ribosomal RNA.
structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.

1 GO annotations of biological process

Name Definition
translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MTHQKRLSVP KSWKVGKKGN KWISTTRPGP HSQARSLPLG IIIRDILKLV DNSREGKRIL
70 80 90 100 110 120
SEGKVLVDGI PRKDLRFPVG LFDVITLPLV NEAYRMLQDE KGRLTLHKLN ETNVNKLCRI
130 140 150 160 170 180
NNKTTVKGGK FQLNLNDGTN IIGSNEYGTK DSLILSIPDK QVVKHLKFEV GNLAMVVGGQ
190 200 210 220 230
HSGETGKIME IREVKSSRHN TVMISGETDF ETIEDYVIVI GEDKPEIRLG GEISE