Q8TC20
Gene name |
CAGE1 (CTAG3) |
Protein name |
Cancer-associated gene 1 protein |
Names |
CAGE-1, Cancer/testis antigen 3, CT3 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:285782 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q8TC20
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q8TC20-F1 | Predicted | AlphaFoldDB |
555 variants for Q8TC20
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
COSM1081492 CA133953091 rs1021333963 COSM1596516 |
2 | N>D | endometrium [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs1157019876 CA362665973 |
2 | N>T | No |
ClinGen gnomAD |
|
|
rs1425945967 CA362665954 |
4 | D>E | No |
ClinGen gnomAD |
|
|
rs779198046 CA133953087 |
4 | D>N | No |
ClinGen gnomAD |
|
|
CA3627483 rs369251036 |
6 | Q>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA133953077 rs891676924 |
7 | K>E | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 8 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs755143431 CA3627482 |
8 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs181766970 CA133953063 |
10 | S>L | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA3627481 rs115342469 |
10 | S>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA133953059 rs905735603 |
15 | P>L | No |
ClinGen TOPMed |
|
|
rs1056635960 CA133953052 |
17 | H>Q | No |
ClinGen TOPMed |
|
|
rs1258818475 CA362665870 |
17 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA362665858 rs1214973827 |
19 | E>Q | No |
ClinGen gnomAD |
|
|
CA133953043 rs199599856 |
27 | V>A | No |
ClinGen Ensembl |
|
|
rs1561870258 CA362665781 |
29 | S>G | No |
ClinGen Ensembl |
|
|
CA362665774 rs1231667469 |
29 | S>N | No |
ClinGen gnomAD |
|
|
CA133953036 rs939510199 |
31 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA3627480 rs780325334 |
33 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA133953011 rs919679981 |
36 | M>L | No |
ClinGen TOPMed |
|
|
CA3627479 rs371529381 |
37 | N>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1287693041 CA362665659 |
39 | S>N | No |
ClinGen gnomAD |
|
|
CA3627478 rs188359408 |
40 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA133953005 rs139231820 |
40 | N>S | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs1359856931 CA362665640 |
41 | L>V | No |
ClinGen gnomAD |
|
|
rs1175553725 CA362665628 |
42 | S>A | No |
ClinGen gnomAD |
|
|
CA362665623 rs1433116043 |
42 | S>F | No |
ClinGen gnomAD |
|
|
CA362665614 rs1343650809 |
43 | Q>P | No |
ClinGen TOPMed |
|
|
CA362665607 rs1244855928 |
44 | G>S | No |
ClinGen TOPMed |
|
|
rs765694427 CA133953004 |
45 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3627477 rs765694427 |
45 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA362665584 rs930667863 |
46 | M>K | No |
ClinGen TOPMed gnomAD |
|
|
CA133952999 rs930667863 |
46 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1187633750 CA362665590 |
46 | M>V | No |
ClinGen TOPMed |
|
|
CA362665573 rs1451168358 |
47 | L>F | No |
ClinGen gnomAD |
|
|
rs1185907278 CA362665551 |
49 | H>R | No |
ClinGen gnomAD |
|
|
rs912795139 CA133952994 |
49 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1483515068 CA362665539 |
50 | S>F | No |
ClinGen gnomAD |
|
|
CA362665523 rs1174205784 |
52 | I>V | No |
ClinGen TOPMed |
|
|
rs1581703618 CA362665468 |
56 | T>S | No |
ClinGen Ensembl |
|
|
CA362665459 rs200490702 |
57 | T>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3627475 rs566734281 |
57 | T>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3627476 rs200490702 |
57 | T>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA133952982 rs756527080 |
58 | G>S | No |
ClinGen gnomAD |
|
|
rs372276847 CA362665432 |
60 | T>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372276847 CA3627473 |
60 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA362665378 rs1298704513 |
64 | P>L | No |
ClinGen TOPMed |
|
|
CA362665385 rs1385506708 |
64 | P>S | No |
ClinGen TOPMed |
|
|
CA362665370 rs1291761569 |
65 | Q>R | No |
ClinGen gnomAD |
|
|
CA362665094 rs776776117 |
66 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA362665093 rs1270068937 |
67 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs983600929 CA133952375 |
68 | I>M | No |
ClinGen Ensembl |
|
|
CA362665082 rs1227076593 |
68 | I>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1227076593 CA362665080 |
68 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1281048362 CA362665058 |
71 | F>C | No |
ClinGen TOPMed |
|
|
rs1322855656 CA362665055 |
72 | E>K | No |
ClinGen gnomAD |
|
|
rs1344298099 CA362665036 |
74 | E>V | No |
ClinGen TOPMed |
|
|
CA3627464 rs768549391 |
76 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA362665024 rs768549391 |
76 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3627463 rs747124047 |
81 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA133952349 rs879219864 |
82 | C>R | No |
ClinGen Ensembl |
|
|
rs780092437 CA3627462 |
82 | C>Y | No |
ClinGen ExAC TOPMed |
|
| TCGA novel | 84 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA362664957 rs1490524019 |
85 | A>V | No |
ClinGen TOPMed |
|
|
rs955172056 CA133952342 |
86 | Y>C | No |
ClinGen TOPMed |
|
|
rs1030578237 CA133952337 |
87 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs374228721 CA3627460 |
90 | D>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA362664930 rs374228721 |
90 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3627459 rs779227583 |
91 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3627449 rs765844839 |
95 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA133948161 rs948535453 |
98 | I>F | No |
ClinGen Ensembl |
|
|
rs1255319846 CA362664834 |
101 | Y>* | No |
ClinGen gnomAD |
|
|
CA362664825 rs1192082979 |
103 | T>A | No |
ClinGen gnomAD |
|
|
CA133948157 rs898230467 |
103 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
rs762640407 CA3627448 |
104 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA362664811 rs1348697933 |
105 | A>E | No |
ClinGen gnomAD |
|
|
rs1260192127 CA362664789 |
108 | Q>H | No |
ClinGen gnomAD |
|
|
rs1561867085 CA362664752 |
114 | S>N | No |
ClinGen Ensembl |
|
|
CA3627447 rs773053959 |
114 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs767584206 CA133948143 |
115 | I>V | No |
ClinGen Ensembl |
|
|
rs1439800964 CA362664741 |
116 | S>T | No |
ClinGen gnomAD |
|
|
rs761705592 CA3627445 |
117 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs765118787 CA3627446 |
117 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776650202 CA3627444 |
118 | L>S | No |
ClinGen ExAC gnomAD |
|
|
CA362664724 rs1169819279 |
119 | R>K | No |
ClinGen TOPMed |
|
|
CA362664699 rs1436221586 |
122 | E>G | No |
ClinGen gnomAD |
|
|
rs572256370 CA3627441 |
124 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA362664682 rs1454154565 |
125 | C>G | No |
ClinGen gnomAD |
|
|
rs183206380 CA3627440 |
130 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs201345450 CA3627437 |
132 | A>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3627439 rs779176539 |
132 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779176539 CA3627438 |
132 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1211613591 CA362664619 |
134 | D>Y | No |
ClinGen gnomAD |
|
|
rs374515749 CA3627435 |
135 | D>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1298264651 CA362664566 |
140 | K>N | No |
ClinGen TOPMed |
|
| TCGA novel | 143 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA362664532 rs1271681438 |
145 | S>N | No |
ClinGen gnomAD |
|
|
CA362664517 rs1428589053 |
147 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA362664519 rs1428589053 |
147 | V>M | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 150 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
TCGA novel CA362664476 rs1334252821 |
152 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen gnomAD NCI-TCGA |
|
CA362664475 rs201771683 |
153 | D>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3627431 rs201771683 |
153 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs955075038 CA133948040 |
154 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
rs750029374 CA3627429 |
155 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA362664453 rs1422255667 |
156 | I>V | No |
ClinGen TOPMed |
|
|
rs186472261 CA3627428 |
157 | K>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs186472261 CA362664446 |
157 | K>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3627427 rs761650545 |
158 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3627426 rs202118772 |
159 | D>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs377555769 CA3627425 |
163 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs900099113 CA133948006 |
164 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs58045825 CA133948011 |
164 | E>K | No |
ClinGen Ensembl |
|
|
CA3627424 rs760639703 |
165 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775348115 CA3627423 |
167 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3627422 rs10223538 VAR_031200 |
169 | T>I | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA362664360 rs1438569762 |
169 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA3627420 rs774500480 |
170 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3627419 rs771167139 |
170 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs371037742 CA3627418 |
174 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA362664323 rs1266485355 |
175 | T>R | No |
ClinGen TOPMed |
|
|
CA362664324 rs1225511943 |
175 | T>S | No |
ClinGen TOPMed |
|
|
CA133947987 rs1002747017 |
178 | L>F | No |
ClinGen TOPMed |
|
|
CA362664295 rs1353064687 |
179 | G>A | No |
ClinGen gnomAD |
|
|
CA362664278 CA362664279 rs971716736 |
181 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA3627416 rs578061218 |
182 | Y>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA362664257 rs1396203230 |
184 | R>S | No |
ClinGen gnomAD |
|
|
rs1476455255 CA362664242 |
186 | P>H | No |
ClinGen gnomAD |
|
|
rs1476455255 CA362664243 |
186 | P>L | No |
ClinGen gnomAD |
|
| TCGA novel | 187 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3627414 rs45437691 |
187 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3627412 rs757921893 |
190 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs373825062 CA3627411 |
191 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369388517 CA3627409 |
192 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3627408 rs201015932 |
195 | H>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3627407 rs763938788 |
197 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA3627406 rs760455037 |
197 | S>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 198 | G>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3627404 rs373153702 |
199 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs759568146 CA3627401 |
200 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs1434162021 CA3627402 |
200 | M>T | No |
ClinGen TOPMed |
|
|
rs1292872934 CA362664153 |
201 | L>V | No |
ClinGen TOPMed |
|
|
CA362664147 rs1440992323 |
202 | K>E | No |
ClinGen gnomAD |
|
|
CA133947894 rs200558049 |
204 | T>S | No |
ClinGen Ensembl |
|
|
CA3627398 rs771044294 |
209 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs774449564 CA3627399 |
209 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs773370160 CA3627396 |
210 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA362664088 rs1410224715 |
211 | S>G | No |
ClinGen gnomAD |
|
|
rs1195207056 CA362664041 |
217 | A>V | No |
ClinGen gnomAD |
|
|
rs1342673851 CA362664039 |
218 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1276652333 CA362664024 |
220 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA362664013 rs1229295518 |
221 | S>R | No |
ClinGen TOPMed |
|
|
rs369787940 CA362664003 |
223 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3627392 rs369787940 |
223 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs778544015 CA3627390 |
225 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1281481580 CA362663971 |
228 | C>R | No |
ClinGen gnomAD |
|
|
CA3627389 rs768036128 |
228 | C>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA133947837 rs768036128 |
228 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770500142 CA3627372 |
231 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs1215691605 CA362663934 |
231 | A>V | No |
ClinGen gnomAD |
|
|
CA3627370 rs371855696 |
233 | P>T | No |
ClinGen ESP ExAC gnomAD |
|
|
CA362663904 rs1376133889 |
236 | E>G | No |
ClinGen gnomAD |
|
|
rs747878969 CA3627368 |
238 | Q>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
| TCGA novel | 239 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs780948876 CA3627367 |
240 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA133945364 rs779287645 |
244 | P>H | No |
ClinGen TOPMed |
|
|
rs754830253 CA3627366 |
244 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA362663834 rs1417218522 |
246 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
rs540357154 CA133945360 |
250 | Y>* | No |
ClinGen Ensembl |
|
|
CA3627365 rs751428743 |
251 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1333151879 CA362663784 |
253 | E>A | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 254 | V>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3627364 rs766314516 |
254 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758454650 CA3627363 |
255 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA362663770 rs758454650 |
255 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA362663745 rs1170974108 |
259 | V>A | No |
ClinGen gnomAD |
|
|
CA362663727 rs1255788436 |
262 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA3627359 rs761917930 |
262 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs764550691 CA3627358 |
263 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA3627357 rs764550691 |
263 | E>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 266 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs201524651 CA3627356 |
266 | S>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3627355 rs776086200 |
267 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA133945285 rs1022520241 |
268 | W>L | No |
ClinGen TOPMed gnomAD |
|
|
CA3627354 rs368353493 |
270 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3627351 rs769400904 |
272 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA3627350 rs747789883 |
275 | W>C | No |
ClinGen ExAC gnomAD |
|
|
CA362663620 rs1169929170 |
279 | A>T | No |
ClinGen gnomAD |
|
|
CA3627346 rs142828071 |
281 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3627348 rs76314363 |
281 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3627345 VAR_031201 rs2876098 |
282 | E>A | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA362663600 rs2876098 |
282 | E>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1348013711 CA362663603 |
282 | E>K | No |
ClinGen TOPMed |
|
|
CA133945246 rs1044562665 |
284 | C>S | No |
ClinGen TOPMed gnomAD |
|
|
CA362663585 rs1044562665 |
284 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs778845517 CA3627343 |
286 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750422560 CA3627344 |
286 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 287 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA362663564 rs1351697369 |
287 | P>S | No |
ClinGen TOPMed |
|
|
CA362663556 rs1482691434 |
288 | D>G | No |
ClinGen gnomAD |
|
|
rs148511680 CA3627342 |
290 | E>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA362663533 rs1249942024 |
291 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
CA362663532 rs1249942024 |
291 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
TCGA novel CA3627340 rs764426003 |
292 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC TOPMed gnomAD NCI-TCGA |
|
CA3627339 rs761076113 |
296 | L>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753145280 CA3627338 |
296 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767969952 CA133945216 |
298 | P>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 298 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs759941879 CA3627336 |
298 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs767969952 CA3627337 |
298 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA362663479 rs1370952597 |
299 | V>A | No |
ClinGen gnomAD |
|
|
CA362663480 rs1370952597 |
299 | V>G | No |
ClinGen gnomAD |
|
|
CA362663465 rs1330369524 |
301 | E>G | No |
ClinGen gnomAD |
|
|
rs1178467964 CA362663469 |
301 | E>K | No |
ClinGen TOPMed |
|
|
rs577811411 CA3627335 |
302 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA362663454 rs1162703657 |
303 | M>V | No |
ClinGen gnomAD |
|
| TCGA novel | 306 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1457026259 CA362663415 |
308 | V>L | No |
ClinGen gnomAD |
|
|
CA133945199 rs912565873 |
309 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA362663377 rs1326496342 |
313 | K>R | No |
ClinGen TOPMed |
|
|
rs1183582901 CA362663361 |
315 | T>S | No |
ClinGen gnomAD |
|
|
CA3627333 rs761324060 |
316 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs1396652328 CA362663329 |
320 | E>K | No |
ClinGen TOPMed |
|
| TCGA novel | 321 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA362663321 rs1178347532 |
321 | V>M | No |
ClinGen gnomAD |
|
|
rs768327020 CA3627331 |
322 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1051856393 CA362663314 |
322 | R>P | No |
ClinGen gnomAD |
|
|
rs1051856393 CA133945151 |
322 | R>Q | No |
ClinGen gnomAD |
|
|
rs1327970086 CA362663312 |
323 | I>L | No |
ClinGen TOPMed |
|
|
rs746702793 CA3627330 |
324 | Q>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 328 | C>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3627328 rs771959214 |
328 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 330 | N>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA362663251 rs1261345297 |
331 | L>P | No |
ClinGen gnomAD |
|
| TCGA novel | 334 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA362663211 rs1315295461 |
336 | R>S | No |
ClinGen gnomAD |
|
|
rs1234017471 CA362663214 |
336 | R>T | No |
ClinGen TOPMed |
|
|
rs921665729 CA133945116 |
337 | V>F | No |
ClinGen Ensembl |
|
|
CA3627326 rs570196844 |
338 | K>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA362663201 rs1308266901 |
338 | K>R | No |
ClinGen gnomAD |
|
|
rs757355283 CA3627325 |
342 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA362663174 rs1351420515 |
342 | M>K | No |
ClinGen gnomAD |
|
|
CA362663166 rs1386117409 |
343 | K>T | No |
ClinGen gnomAD |
|
|
rs201211151 CA3627324 |
345 | T>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA362663108 rs1408458517 |
351 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3627322 rs778104177 |
351 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA362663096 rs1251697881 |
353 | V>I | No |
ClinGen TOPMed |
|
|
CA362663083 rs199880823 |
355 | N>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3627321 rs199880823 |
355 | N>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3627320 rs753020468 |
355 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1451490039 CA362663060 |
358 | K>R | No |
ClinGen gnomAD |
|
|
rs202038274 CA3627318 |
361 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA362663033 rs1206906880 |
362 | E>K | No |
ClinGen gnomAD |
|
|
rs1581693149 CA362663027 |
363 | E>K | No |
ClinGen Ensembl |
|
|
CA362663006 rs1285652169 |
365 | I>M | No |
ClinGen gnomAD |
|
|
rs1349842479 CA362663001 |
366 | E>G | No |
ClinGen gnomAD |
|
|
rs1235276350 CA362663005 |
366 | E>K | No |
ClinGen gnomAD |
|
|
CA362662990 rs1561864567 |
367 | D>E | No |
ClinGen Ensembl |
|
|
rs1326890932 CA362662942 |
374 | E>G | No |
ClinGen gnomAD |
|
|
CA3627316 rs374283046 |
375 | K>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs761271003 CA3627315 |
375 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA3627314 COSM3831001 COSM3831003 rs781631212 COSM3831002 |
376 | N>D | breast [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1355113986 CA362662922 |
377 | D>G | No |
ClinGen TOPMed |
|
|
CA133945048 rs370574398 |
377 | D>H | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA362662925 rs370574398 |
377 | D>N | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA362662914 rs768202423 |
378 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3627313 rs768202423 |
378 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760306465 CA3627312 |
381 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA362662872 rs1411761344 |
384 | N>I | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 386 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771698858 CA3627310 |
387 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs774109668 CA3627309 |
388 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs536892431 CA3627307 |
388 | V>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs774109668 CA3627308 |
388 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1211908252 CA362662839 |
389 | L>F | No |
ClinGen gnomAD |
|
|
rs749281807 CA3627306 |
392 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs749281807 CA133945023 |
392 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1199594605 CA362662818 |
393 | Q>E | No |
ClinGen gnomAD |
|
|
CA362662799 rs777980880 |
395 | H>L | No |
ClinGen ExAC gnomAD |
|
|
CA362662800 rs777980880 |
395 | H>P | No |
ClinGen ExAC gnomAD |
|
|
CA133945011 rs1044530047 |
395 | H>Q | No |
ClinGen TOPMed |
|
|
CA3627305 rs777980880 |
395 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA362662789 rs1339323342 |
397 | Q>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs185029616 CA3627304 |
397 | Q>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA133944999 rs931515970 |
400 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA3627303 rs748248507 |
400 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA3627301 rs755246608 |
403 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA362662736 CA3627299 rs766691727 |
404 | E>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC gnomAD NCI-TCGA |
|
rs1188671517 COSM319206 CA362662729 COSM319205 |
405 | M>I | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1423032256 CA362662734 |
405 | M>K | No |
ClinGen gnomAD |
|
|
rs758879397 CA133944976 |
405 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs758879397 CA3627298 |
405 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1236009353 CA362662703 |
409 | Q>R | No |
ClinGen gnomAD |
|
|
rs760183390 CA3627293 |
412 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA133944921 rs900147427 |
413 | I>V | No |
ClinGen TOPMed |
|
|
CA133944914 rs1042795019 |
415 | A>P | No |
ClinGen gnomAD |
|
|
CA133944907 rs947098794 |
415 | A>V | No |
ClinGen TOPMed |
|
|
CA3627292 rs774948847 |
416 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA362662647 rs1234667748 |
417 | Y>C | No |
ClinGen gnomAD |
|
|
CA362662649 rs1273273775 |
417 | Y>D | No |
ClinGen gnomAD |
|
|
CA3627291 rs767223637 |
418 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA3627290 rs759214291 |
421 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA3627289 rs774168434 |
422 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3627288 rs770902760 |
423 | R>T | No |
ClinGen ExAC gnomAD |
|
|
rs773283429 CA362662601 |
424 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs199850738 CA3627287 |
424 | Y>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs773283429 CA3627286 |
424 | Y>S | No |
ClinGen ExAC gnomAD |
|
|
rs988708300 CA133944864 |
426 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
CA362662578 rs1465298705 |
427 | E>K | No |
ClinGen Ensembl |
|
|
rs769933099 CA3627285 |
428 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs748278473 CA3627284 |
430 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
rs781228739 CA3627283 |
432 | N>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 432 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA362662478 rs1457152524 |
434 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA362662458 rs1561864340 |
436 | S>I | No |
ClinGen Ensembl |
|
| TCGA novel | 436 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs755194718 CA3627281 |
436 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA362662451 rs1371100685 |
437 | Q>* | No |
ClinGen TOPMed |
|
| TCGA novel | 437 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA362662406 rs1288483152 |
440 | E>D | No |
ClinGen gnomAD |
|
|
CA133944823 rs879012595 |
441 | M>T | No |
ClinGen TOPMed |
|
|
CA362662379 rs780382932 |
442 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1231471850 CA362662383 |
442 | D>G | No |
ClinGen TOPMed |
|
|
CA362662295 rs1373111160 |
447 | K>E | No |
ClinGen gnomAD |
|
|
CA3627276 rs565404738 |
449 | E>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA133944808 rs928189796 |
450 | E>K | No |
ClinGen Ensembl |
|
|
CA133944795 rs982338363 |
451 | E>D | No |
ClinGen TOPMed |
|
|
rs755531598 CA3627272 |
455 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA133944772 rs916552780 |
456 | Q>R | No |
ClinGen Ensembl |
|
|
rs1401509408 CA362662173 |
457 | Q>* | No |
ClinGen gnomAD |
|
|
CA3627269 rs375725860 |
459 | K>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs576095436 CA3627268 |
461 | E>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA362662080 rs1487438871 |
463 | E>K | No |
ClinGen gnomAD |
|
|
rs1245643259 CA362662059 |
464 | K>E | No |
ClinGen gnomAD |
|
|
CA133944700 rs200921165 |
465 | A>V | No |
ClinGen 1000Genomes |
|
|
CA3627266 rs766276713 |
470 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761693316 CA3627262 |
475 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746643033 CA3627263 |
475 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1304574226 CA362661856 |
476 | E>D | No |
ClinGen gnomAD |
|
|
rs866412142 CA133944648 |
476 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA362661827 rs1221456158 |
478 | E>* | No |
ClinGen gnomAD |
|
|
rs1035746316 CA133944647 |
478 | E>G | No |
ClinGen TOPMed |
|
|
rs776748203 CA3627261 |
479 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs768674093 CA3627260 |
483 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1325892764 CA362661744 |
483 | E>G | No |
ClinGen TOPMed |
|
| TCGA novel | 484 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA362661702 COSM484336 COSM1137566 COSM484335 rs1425635987 |
485 | L>F | kidney [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA3627259 rs373407949 |
485 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3627257 rs780258432 |
486 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA362661699 rs780258432 |
486 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 487 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3627255 rs531188231 |
488 | Q>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA362661655 rs1477000581 |
488 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
COSM461743 COSM1134593 CA362661628 COSM461742 rs1211732085 |
490 | E>K | cervix Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA3627253 rs560699689 |
491 | F>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA362661599 rs1175223058 |
491 | F>Y | No |
ClinGen gnomAD |
|
|
rs1030675254 CA133944558 |
494 | L>P | No |
ClinGen gnomAD |
|
|
rs868137180 CA133944541 |
495 | E>D | No |
ClinGen Ensembl |
|
|
CA362661519 rs1195319730 |
496 | K>R | No |
ClinGen TOPMed |
|
| TCGA novel | 498 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA362661458 rs1561864120 |
501 | E>G | No |
ClinGen Ensembl |
|
|
CA362661452 rs1476135172 |
502 | R>G | No |
ClinGen gnomAD |
|
|
rs1188629000 CA362661428 |
503 | Q>R | No |
ClinGen gnomAD |
|
|
CA362661360 rs571770013 |
508 | R>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 514 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3627246 rs762792875 |
518 | N>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 519 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 519 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3627243 rs372024570 |
522 | M>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3627244 rs765170075 |
522 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs750209445 CA3627245 |
522 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA362661129 rs1395911837 |
528 | T>A | No |
ClinGen TOPMed |
|
|
rs544846885 CA3627242 |
528 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs762571689 CA133944456 |
529 | K>* | No |
ClinGen Ensembl |
|
|
rs775641451 CA3627239 |
532 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs1192229957 CA362661069 |
533 | L>F | No |
ClinGen gnomAD |
|
|
CA362661054 rs1221371677 |
534 | Q>H | No |
ClinGen gnomAD |
|
|
CA362661030 rs1370641549 |
536 | Q>R | No |
ClinGen TOPMed |
|
| TCGA novel | 537 | I>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1307340507 CA362660986 |
539 | E>D | No |
ClinGen TOPMed |
|
|
COSM1199434 COSM1081461 CA362660994 COSM1081460 rs1482505651 |
539 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs34744890 CA362660982 |
540 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3627236 rs34744890 |
540 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3627234 rs749801554 |
541 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1230967451 CA362660939 |
545 | A>S | No |
ClinGen TOPMed |
|
|
rs1256245689 CA362660926 |
547 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA133944410 rs142041363 |
549 | Q>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3627233 rs142041363 |
549 | Q>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1335530709 CA362660900 |
550 | Q>H | No |
ClinGen gnomAD |
|
|
rs1230973271 CA362660869 |
555 | E>G | No |
ClinGen TOPMed |
|
|
rs1315161535 CA362660858 |
556 | E>D | No |
ClinGen gnomAD |
|
|
rs754458187 CA3627232 |
557 | Q>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 558 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA362660821 rs1480219198 |
562 | K>* | No |
ClinGen TOPMed |
|
|
rs200653577 CA362660790 |
566 | A>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3627231 rs200653577 |
566 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA362660787 rs1169855749 |
566 | A>V | No |
ClinGen gnomAD |
|
|
CA3627230 rs779747390 |
568 | L>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758099581 CA3627229 |
569 | K>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1463477708 CA362660759 |
570 | D>E | No |
ClinGen TOPMed |
|
|
rs1422832430 CA362660763 |
570 | D>Y | No |
ClinGen gnomAD |
|
|
rs761517292 CA3627227 |
571 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs753751154 CA3627225 |
572 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1168708803 CA362660750 |
572 | L>I | No |
ClinGen TOPMed |
|
|
CA362660748 rs1178075253 |
572 | L>S | No |
ClinGen gnomAD |
|
|
CA362660744 rs1236941142 |
573 | E>K | No |
ClinGen gnomAD |
|
|
rs760706865 CA3627223 |
575 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763960552 CA3627224 |
575 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA3627222 rs775518647 |
576 | L>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3627221 rs367731088 |
580 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs759744070 CA3627220 |
581 | T>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA133942493 rs994066947 |
583 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA133942484 rs762074102 |
584 | T>A | No |
ClinGen Ensembl |
|
|
CA3627203 rs752641885 |
585 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1463432744 CA362660369 |
585 | K>N | No |
ClinGen TOPMed |
|
|
CA3627202 COSM3411258 rs767515041 COSM3411256 COSM3411257 |
586 | T>M | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA362660344 rs1417439977 |
588 | H>P | No |
ClinGen gnomAD |
|
|
rs1047765887 CA133942446 |
588 | H>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA3627199 rs766554545 |
590 | N>H | No |
ClinGen ExAC gnomAD |
|
|
CA3627196 rs376342450 |
593 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA133942422 rs867274602 |
594 | D>N | No |
ClinGen Ensembl |
|
|
CA133942413 rs551141818 |
598 | C>Y | No |
ClinGen Ensembl |
|
|
CA3627193 rs771695866 |
600 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA3627192 rs745419866 |
601 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3627191 rs201271974 |
603 | N>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA362660190 rs1581690142 |
605 | A>S | No |
ClinGen Ensembl |
|
|
rs1254233088 CA362660184 |
606 | D>N | No |
ClinGen gnomAD |
|
|
rs537519924 CA3627190 |
606 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA3627189 rs748991497 |
607 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA362660178 rs1326538902 |
607 | I>V | No |
ClinGen gnomAD |
|
|
CA3627188 rs777371150 |
609 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA3627187 rs755904610 |
610 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs1386902755 CA362660139 |
613 | L>V | No |
ClinGen TOPMed |
|
|
CA362660131 rs1238914454 |
614 | A>G | No |
ClinGen gnomAD |
|
| TCGA novel | 614 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 614 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3627186 rs752623297 |
618 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1319398521 CA362660096 |
619 | S>T | No |
ClinGen TOPMed |
|
|
rs1006620902 CA133942374 |
622 | A>T | No |
ClinGen Ensembl |
|
|
rs889520394 CA133942370 |
624 | M>I | No |
ClinGen TOPMed |
|
|
rs767496583 CA3627185 |
624 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3627184 rs755023634 |
626 | G>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 628 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs45502393 CA3627183 |
631 | Q>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA362659703 rs1337775141 |
634 | I>N | No |
ClinGen TOPMed |
|
|
CA133941473 rs772307902 |
635 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA133941472 rs868033934 |
638 | A>S | No |
ClinGen Ensembl |
|
|
CA133941448 rs865955522 |
639 | E>* | No |
ClinGen Ensembl |
|
|
rs1245769868 CA362659605 |
639 | E>D | No |
ClinGen gnomAD |
|
|
CA3627170 rs769560770 |
643 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA3627169 rs747982278 |
645 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA3627167 rs781000321 |
647 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA362659440 rs1374663549 |
648 | S>G | No |
ClinGen gnomAD |
|
|
rs1561862254 CA362659387 |
650 | I>M | No |
ClinGen Ensembl |
|
|
CA3627166 rs372599991 |
650 | I>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA362659390 rs372599991 |
650 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1324225119 CA362659399 |
650 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA362659350 rs1411982527 |
653 | Q>* | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 654 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA362659313 rs1162878417 |
654 | K>R | No |
ClinGen gnomAD |
|
|
rs1196769214 CA362659279 |
655 | L>P | No |
ClinGen TOPMed |
|
|
rs146115743 CA362659249 |
656 | K>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs536949246 CA133941411 |
657 | S>N | No |
ClinGen 1000Genomes |
|
|
rs376464144 CA3627164 |
657 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3627163 rs758572065 |
658 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3627161 rs373050783 |
662 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA362659003 rs1449361366 |
663 | K>N | No |
ClinGen gnomAD |
|
|
rs1216841716 CA362658973 |
665 | L>* | No |
ClinGen gnomAD |
|
|
CA3627160 rs762237360 |
665 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1298510181 CA362658929 |
666 | D>E | No |
ClinGen TOPMed |
|
|
rs764575013 CA3627158 |
666 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs192919356 CA3627130 |
670 | I>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA362657861 rs1412339685 |
670 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs775261044 CA3627129 |
671 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3627128 rs772006207 |
672 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA362657810 rs1248992692 |
677 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs200028605 CA3627127 |
677 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA362657799 rs1195765717 |
679 | S>G | No |
ClinGen gnomAD |
|
|
CA3627126 rs779077314 |
679 | S>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 680 | I>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA362657788 rs1295601600 |
680 | I>T | No |
ClinGen TOPMed |
|
|
CA3627124 rs375800106 |
681 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375800106 CA3627125 |
681 | R>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1488820771 CA362657777 |
682 | D>G | No |
ClinGen gnomAD |
|
|
CA362657762 rs1381742925 |
684 | P>L | No |
ClinGen gnomAD |
|
|
rs756409000 CA3627122 |
685 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA362657754 rs1397532266 |
686 | L>F | No |
ClinGen gnomAD |
|
| TCGA novel | 687 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3627120 rs767798625 |
688 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs527881100 CA3627119 |
689 | A>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA362657720 rs1443206338 |
692 | D>G | No |
ClinGen gnomAD |
|
|
CA3627118 rs752069157 |
692 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752069157 CA362657721 |
692 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3627117 rs145708845 |
694 | Y>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1179834352 CA362657694 |
695 | H>Q | No |
ClinGen gnomAD |
|
|
CA362657690 rs1236442971 |
696 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA3627116 rs200680929 |
696 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs776245516 CA3627115 |
701 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3627113 rs372243525 |
702 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 703 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA133939419 rs893070220 |
703 | F>S | No |
ClinGen Ensembl |
|
| TCGA novel | 704 | L>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1469390874 CA362665236 |
709 | E>D | No |
ClinGen gnomAD |
|
| TCGA novel | 710 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3627080 rs768987660 |
711 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA362665219 rs747415887 |
712 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3627078 rs199925787 |
712 | I>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs747415887 CA3627079 |
712 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA133951385 rs938707436 |
714 | C>R | No |
ClinGen TOPMed |
|
|
CA133951383 rs938707436 |
714 | C>S | No |
ClinGen TOPMed |
|
|
rs972613244 CA133951381 |
717 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
rs972613244 CA362665187 |
717 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
CA362665184 rs1268973612 |
717 | Q>P | No |
ClinGen gnomAD |
|
|
rs192251770 CA3627077 |
718 | R>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1561856978 CA362665163 |
720 | A>V | No |
ClinGen Ensembl |
|
|
rs199529631 CA3627076 |
721 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs777270066 CA3627075 |
722 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs980479926 CA133951353 |
725 | Q>E | No |
ClinGen Ensembl |
|
|
CA3627072 rs575215580 |
726 | I>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs370217410 CA3627074 |
726 | I>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 727 | A>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA362662117 rs1211224176 |
729 | L>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1554136206 CA362662103 |
730 | E>* | No |
ClinGen Ensembl |
|
|
CA362662061 rs1263836471 |
732 | R>G | No |
ClinGen TOPMed |
|
| TCGA novel | 732 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA362662031 rs1362068232 |
733 | N>D | No |
ClinGen gnomAD |
|
|
CA3627060 rs747254408 |
733 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA362661983 rs1378376746 |
734 | K>N | No |
ClinGen gnomAD |
|
|
rs1440179064 CA362661962 |
735 | H>R | No |
ClinGen gnomAD |
|
|
CA133938526 rs78294075 |
737 | E>G | No |
ClinGen Ensembl |
|
|
CA3627058 rs772429762 |
737 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1185307317 CA362661801 |
742 | K>R | No |
ClinGen TOPMed |
|
|
rs535177392 CA3627056 |
744 | R>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs755626566 CA3627055 |
745 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1420078531 CA362661678 |
747 | A>T | No |
ClinGen gnomAD |
|
|
rs1382160276 CA362661652 |
748 | R>G | No |
ClinGen gnomAD |
|
|
rs747649547 CA3627054 |
748 | R>T | No |
ClinGen ExAC gnomAD |
|
|
rs199899916 CA3627053 |
750 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs774887215 CA3627036 |
752 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs774887215 CA362660666 |
752 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA362660650 rs1225494174 |
754 | S>T | No |
ClinGen gnomAD |
|
| TCGA novel | 757 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA362660617 rs1363830338 |
758 | H>L | No |
ClinGen gnomAD |
|
|
rs142647100 CA3627035 |
759 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1445486549 CA362660605 |
760 | K>T | No |
ClinGen gnomAD |
|
|
rs1467809427 CA362660589 |
762 | M>I | No |
ClinGen gnomAD |
|
|
rs754606336 CA3627031 |
762 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3627030 rs746650741 |
764 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA3627006 rs757141594 |
767 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA3627005 rs753760023 |
767 | A>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 768 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 770 | K>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs964102088 CA133935345 |
773 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs777737725 CA3627004 |
774 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs1241050880 CA362658880 |
777 | D>V | No |
ClinGen gnomAD |
No associated diseases with Q8TC20
3 regional properties for Q8TC20
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| conserved_site | Calreticulin/calnexin, conserved site | 153 - 168 | IPR018124-1 |
| conserved_site | Calreticulin/calnexin, conserved site | 187 - 195 | IPR018124-2 |
| conserved_site | Calreticulin/calnexin, conserved site | 331 - 343 | IPR018124-3 |
No GO annotations of cellular component
| Name | Definition |
|---|---|
| No GO annotations for cellular component |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MNKDYQKFWS | SPSDPVHFEV | DTSHEKVESM | SESDTMNVSN | LSQGVMLSHS | PICMETTGTT |
| 70 | 80 | 90 | 100 | 110 | 120 |
| CDLPQNEIKN | FERENEYEST | LCEDAYGTLD | NLLNDNNIEN | YSTNALIQPV | DTISISSLRQ |
| 130 | 140 | 150 | 160 | 170 | 180 |
| FETVCKFHWV | EAFDDEMTEK | PEFQSQVYNY | AKDNNIKQDS | FKEENPMETS | VSANTDQLGN |
| 190 | 200 | 210 | 220 | 230 | 240 |
| EYFRQPPPRS | PPLIHCSGEM | LKFTEKSLAK | SIAKESALNP | SQPPSFLCKT | AVPSKEIQNY |
| 250 | 260 | 270 | 280 | 290 | 300 |
| GEIPEMSVSY | EKEVTAEGVE | RPEIVSTWSS | AGISWRSEAC | RENCEMPDWE | QSAESLQPVQ |
| 310 | 320 | 330 | 340 | 350 | 360 |
| EDMALNEVLQ | KLKHTNRKQE | VRIQELQCSN | LYLEKRVKEL | QMKITKQQVF | IDVINKLKEN |
| 370 | 380 | 390 | 400 | 410 | 420 |
| VEELIEDKYK | IILEKNDTKK | TLQNLEEVLA | NTQKHLQESR | NDKEMLQLQF | KKIKANYVCL |
| 430 | 440 | 450 | 460 | 470 | 480 |
| QERYMTEMQQ | KNKSVSQYLE | MDKTLSKKEE | EVERLQQLKK | ELEKATASAL | DLLKREKEAQ |
| 490 | 500 | 510 | 520 | 530 | 540 |
| EQEFLSLQEE | FQKLEKENLE | ERQKLKSRLE | KLLTQVRNLQ | FMSENERTKN | IKLQQQINEV |
| 550 | 560 | 570 | 580 | 590 | 600 |
| KNENAKLKQQ | VARSEEQNYV | PKFETAQLKD | QLEEVLKSDI | TKDTKTTHSN | LLPDCSPCEE |
| 610 | 620 | 630 | 640 | 650 | 660 |
| RLNPADIKRA | SQLASKMHSL | LALMVGLLTC | QDIINSDAEH | FKESEKVSDI | MLQKLKSLHL |
| 670 | 680 | 690 | 700 | 710 | 720 |
| KKKTLDKEVI | DCDSDEAKSI | RDVPTLLGAK | LDKYHSLNEE | LDFLVTSYEE | IIECADQRLA |
| 730 | 740 | 750 | 760 | 770 | |
| ISHSQIAHLE | ERNKHLEDLI | RKPREKARKP | RSKSLENHPK | SMTMMPALFK | ENRNDLD |