Q8PCK7
Gene name |
rsmH |
Protein name |
Ribosomal RNA small subunit methyltransferase H |
Names |
16S rRNA m(4)C1402 methyltransferase, rRNA (cytosine-N(4)-)-methyltransferase RsmH |
Species |
Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) |
KEGG Pathway |
xcc:XCC0718 |
EC number |
2.1.1.199: Methyltransferases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q8PCK7
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q8PCK7-F1 | Predicted | AlphaFoldDB |
No variants for Q8PCK7
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q8PCK7 | |||||
No associated diseases with Q8PCK7
5 regional properties for Q8PCK7
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain | 139 - 283 | IPR011538 |
| domain | 4Fe-4S ferredoxin-type, iron-sulphur binding domain | 369 - 436 | IPR017896 |
| conserved_site | 4Fe-4S ferredoxin, iron-sulphur binding, conserved site | 416 - 427 | IPR017900 |
| domain | Soluble ligand binding domain | 296 - 344 | IPR019554 |
| domain | RnfC Barrel sandwich hybrid domain | 14 - 115 | IPR026902 |
Functions
| Description | ||
|---|---|---|
| EC Number | 2.1.1.199 | Methyltransferases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| rRNA (cytosine-N4-)-methyltransferase activity | Catalysis of the reaction: a cytidine in rRNA + S-adenosyl-L-methionine = an N(4)-methylcytidine in rRNA + H+ + S-adenosyl-L-homocysteine. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| rRNA base methylation | The addition of a methyl group to an atom in the nucleoside base portion of a nucleotide residue in an rRNA molecule. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSQPPAAHVP | VLYTQVLEGL | QVTENGTYLD | GTFGRGGHAR | GVLEHLGPGG | RLLVMDKDPE |
| 70 | 80 | 90 | 100 | 110 | 120 |
| AIAVAEHTFG | GDARVSIHRG | SFAGLGQVVA | AATVDGILLD | LGVSSPQLDV | AGRGFSFGKD |
| 130 | 140 | 150 | 160 | 170 | 180 |
| GPLDMRMDPD | SGQSAAGWLA | QATDREIADV | LWTYGEERQS | RRIARAIVAR | RGEQPLLRTA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| QLADLIASVM | PRGDSKTHPA | TRSFQAIRIH | INRELADLEA | GLDAALGALK | PGGRLAVISF |
| 250 | 260 | 270 | 280 | 290 | 300 |
| HSLEDRIVKQ | FMARYAKAPP | SNRRLPEAQP | FVPTLQLVSG | AIKADDSELA | VNPRARSAVL |
| 310 | 320 | 330 | 340 | ||
| RVAEKLGMEN | RESGMGKGHG | AAASRFPTPD | SRFPTSPNGD | AP |