Q8NRR3

PR
Gene name
ripA
Protein name
HTH-type transcriptional regulator RipA
Names
AraC-type regulator RipA, Repressor of iron proteins A, RIPA
Species
Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025)
KEGG Pathway
cgl:Cgl0982
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

169-257 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q8NRR3

Entry ID Method Resolution Chain Position Source
AF-Q8NRR3-F1 Predicted AlphaFoldDB

No variants for Q8NRR3

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q8NRR3

No associated diseases with Q8NRR3

2 regional properties for Q8NRR3

Type Name Position InterPro Accession
domain DNA binding HTH domain, AraC-type 112 - 209 IPR018060
conserved_site HTH domain AraC-type, conserved site 162 - 203 IPR018062

Functions

Description
EC Number
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

No GO annotations of cellular component

Name Definition
No GO annotations for cellular component

2 GO annotations of molecular function

Name Definition
DNA-binding transcription factor activity A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
sequence-specific DNA binding Binding to DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.

1 GO annotations of biological process

Name Definition
regulation of DNA-templated transcription Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MSSASLLWCH SGVSTVRFGE RIFTLVAGDL LFAPEEAQVA DDSQGLVLNI RFETLNIMGP
70 80 90 100 110 120
ARRIHLGHVW NDRLTFEYSR SLFGKETLSP DIARLFTDRV PTPPLPAPRK ARAVAQVLVS
130 140 150 160 170 180
NPADQTSLEE FAEIQGVSAR TLQRQFLKST GYSFSEWRAA QRVCVAASLL AHDFSISVVA
190 200 210 220 230 240
NLVGFAATSS LTRAFRRHTG ATPSTFTTGQ IGMGSAGHPP RIPATTTFAE AHQDQQLWIY
250 260 270 280 290 300
SGTATVTTPG YCRFMGQGDM VTIPAGTQTR IDVAAGSIAF PVPVGLDEWG MDLTRVVAVN
310 320 330
NQQPKPLTIL EQSEWSKLSE ELLNTPVPVQ M