Q8L6Y4
Gene name |
EMF2 (At5g51230/At5g51240, MWD22.18/MWD22.19) |
Protein name |
Polycomb group protein EMBRYONIC FLOWER 2 |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT5G51230 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q8L6Y4
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q8L6Y4-F1 | Predicted | AlphaFoldDB |
28 variants for Q8L6Y4
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_5_20824166_C_G | 5 | P>R | No | 1000Genomes | |
| ENSVATH07394126 | 12 | S>T | No | 1000Genomes | |
| ENSVATH07394128 | 56 | Q>H | No | 1000Genomes | |
| ENSVATH03408220 | 82 | I>L | No | 1000Genomes | |
| tmp_5_20824967_G_C | 94 | A>P | No | 1000Genomes | |
| tmp_5_20824968_C_T | 94 | A>V | No | 1000Genomes | |
| tmp_5_20825178_C_G | 132 | L>V | No | 1000Genomes | |
| tmp_5_20825196_G_A | 138 | V>I | No | 1000Genomes | |
| ENSVATH12697078 | 158 | L>W | No | 1000Genomes | |
| tmp_5_20825400_C_T | 175 | A>V | No | 1000Genomes | |
| ENSVATH07394141 | 224 | T>K | No | 1000Genomes | |
| ENSVATH07394153 | 286 | N>D | No | 1000Genomes | |
| tmp_5_20826236_G_A | 287 | D>N | No | 1000Genomes | |
| tmp_5_20826709_T_G | 331 | V>G | No | 1000Genomes | |
| ENSVATH00726230 | 346 | T>N | No | 1000Genomes | |
| ENSVATH07394161 | 349 | L>V | No | 1000Genomes | |
| ENSVATH07394164 | 375 | K>N | No | 1000Genomes | |
| tmp_5_20827472_G_A | 382 | D>N | No | 1000Genomes | |
| ENSVATH07394175 | 396 | R>K | No | 1000Genomes | |
| ENSVATH12697177 | 405 | R>W | No | 1000Genomes | |
| tmp_5_20827627_A_G | 406 | S>G | No | 1000Genomes | |
| ENSVATH03408242 | 438 | P>T | No | 1000Genomes | |
| tmp_5_20827902_T_A | 442 | Y>N | No | 1000Genomes | |
| tmp_5_20827975_G_C | 466 | C>S | No | 1000Genomes | |
| ENSVATH12697183 | 536 | A>V | No | 1000Genomes | |
| tmp_5_20829099_G_A | 581 | E>K | No | 1000Genomes | |
| ENSVATH12697227 | 611 | H>Q | No | 1000Genomes | |
| ENSVATH07394193 | 630 | Q>E | No | 1000Genomes |
No associated diseases with Q8L6Y4
1 regional properties for Q8L6Y4
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Polycomb protein, VEFS-Box | 490 - 624 | IPR019135 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
5 GO annotations of molecular function
| Name | Definition |
|---|---|
| chromatin DNA binding | Binding to DNA that is assembled into chromatin. |
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| DNA-binding transcription factor activity | A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. |
| metal ion binding | Binding to a metal ion. |
| transcription cis-regulatory region binding | Binding to a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| cell differentiation | The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state. |
| flower development | The process whose specific outcome is the progression of the flower over time, from its formation to the mature structure. The flower is the reproductive structure in a plant, and its development begins with the transition of the vegetative or inflorescence meristem into a floral meristem. |
| negative regulation of flower development | Any process that stops, prevents, or reduces the frequency, rate or extent of flower development. |
| regulation of gene expression by genomic imprinting | An epigenetic mechanism of regulation of gene expression in which epigenetic modifications (imprints) are established during gametogenesis. For a given gene to show parentally biased expression, the imprint are established exclusively in one of the two parental genomes, thus generating an asymmetry between the maternal and paternal alleles. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MPGIPLVSRE | TSSCSRSTEQ | MCHEDSRLRI | SEEEEIAAEE | SLAAYCKPVE | LYNIIQRRAI |
| 70 | 80 | 90 | 100 | 110 | 120 |
| RNPLFLQRCL | HYKIEAKHKR | RIQMTVFLSG | AIDAGVQTQK | LFPLYILLAR | LVSPKPVAEY |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SAVYRFSRAC | ILTGGLGVDG | VSQAQANFLL | PDMNRLALEA | KSGSLAILFI | SFAGAQNSQF |
| 190 | 200 | 210 | 220 | 230 | 240 |
| GIDSGKIHSG | NIGGHCLWSK | IPLQSLYASW | QKSPNMDLGQ | RVDTVSLVEM | QPCFIKLKSM |
| 250 | 260 | 270 | 280 | 290 | 300 |
| SEEKCVSIQV | PSNPLTSSSP | QQVQVTISAE | EVGSTEKSPY | SSFSYNDISS | SSLLQIIRLR |
| 310 | 320 | 330 | 340 | 350 | 360 |
| TGNVVFNYRY | YNNKLQKTEV | TEDFSCPFCL | VKCASFKGLR | YHLPSTHDLL | NFEFWVTEEF |
| 370 | 380 | 390 | 400 | 410 | 420 |
| QAVNVSLKTE | TMISKVNEDD | VDPKQQTFFF | SSKKFRRRRQ | KSQVRSSRQG | PHLGLGCEVL |
| 430 | 440 | 450 | 460 | 470 | 480 |
| DKTDDAHSVR | SEKSRIPPGK | HYERIGGAES | GQRVPPGTSP | ADVQSCGDPD | YVQSIAGSTM |
| 490 | 500 | 510 | 520 | 530 | 540 |
| LQFAKTRKIS | IERSDLRNRS | LLQKRQFFHS | HRAQPMALEQ | VLSDRDSEDE | VDDDVADFED |
| 550 | 560 | 570 | 580 | 590 | 600 |
| RRMLDDFVDV | TKDEKQMMHM | WNSFVRKQRV | LADGHIPWAC | EAFSRLHGPI | MVRTPHLIWC |
| 610 | 620 | 630 | |||
| WRVFMVKLWN | HGLLDARTMN | NCNTFLEQLQ | I |