Q8L4R0
Gene name |
TGD1 |
Protein name |
Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic |
Names |
ABC transporter I family member 14, ABC transporter ABCI.14, AtABCI14 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT1G19800 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q8L4R0
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q8L4R0-F1 | Predicted | AlphaFoldDB |
21 variants for Q8L4R0
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH04604671 | 12 | C>F | No | 1000Genomes | |
| ENSVATH13928273 | 16 | R>S | No | 1000Genomes | |
| ENSVATH13928274 | 17 | V>L | No | 1000Genomes | |
| ENSVATH00032706 | 42 | Q>H | No | 1000Genomes | |
| tmp_1_6847041_C_T | 47 | S>L | No | 1000Genomes | |
| tmp_1_6847052_C_T,A | 51 | R>W | No | 1000Genomes | |
| tmp_1_6847092_G_A | 64 | G>D | No | 1000Genomes | |
| tmp_1_6847109_A_T | 70 | M>L | No | 1000Genomes | |
| ENSVATH11567796 | 81 | A>T | No | 1000Genomes | |
| ENSVATH11567797 | 84 | Q>H | No | 1000Genomes | |
| tmp_1_6847272_G_A | 124 | R>K | No | 1000Genomes | |
| tmp_1_6847302_G_C | 134 | G>A | No | 1000Genomes | |
| ENSVATH11567800 | 235 | L>F | No | 1000Genomes | |
| ENSVATH13928275 | 255 | L>F | No | 1000Genomes | |
| ENSVATH00032708 | 259 | V>A | No | 1000Genomes | |
| ENSVATH01073048 | 272 | H>N | No | 1000Genomes | |
| ENSVATH01073049 | 272 | H>P | No | 1000Genomes | |
| tmp_1_6847728_G_A | 276 | R>K | No | 1000Genomes | |
| tmp_1_6847803_G_T | 301 | W>L | No | 1000Genomes | |
| tmp_1_6847874_G_A | 325 | V>I | No | 1000Genomes | |
| ENSVATH13928277 | 327 | I>V | No | 1000Genomes |
No associated diseases with Q8L4R0
No regional properties for Q8L4R0
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q8L4R0 | |||
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| ATP-binding cassette (ABC) transporter complex | A complex for the transport of metabolites into and out of the cell, typically comprised of four domains; two membrane-associated domains and two ATP-binding domains at the intracellular face of the membrane, that form a central pore through the plasma membrane. Each of the four core domains may be encoded as a separate polypeptide or the domains can be fused in any one of a number of ways into multidomain polypeptides. In Bacteria and Archaebacteria, ABC transporters also include substrate binding proteins to bind substrate external to the cytoplasm and deliver it to the transporter. |
| chloroplast | A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. |
| chloroplast envelope | The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space. |
| chloroplast inner membrane | The inner, i.e. lumen-facing, lipid bilayer of the chloroplast envelope; also faces the chloroplast stroma. |
| chloroplast outer membrane | The outer, i.e. cytoplasm-facing, lipid bilayer of the chloroplast envelope. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| lipid transporter activity | Enables the directed movement of lipids into, out of or within a cell, or between cells. |
| phospholipid transporter activity | Enables the directed movement of phospholipids into, out of or within a cell, or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| lipid transport | The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. |
| phospholipid transport | The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phospholipids are any lipids containing phosphoric acid as a mono- or diester. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MMQTCCIHQS | FCFPHRVFPR | FDASIGIKPP | KLCQVGFIGK | TQSYGISSPI | RQRRLYVNLN |
| 70 | 80 | 90 | 100 | 110 | 120 |
| ANDGHPSMSM | LEEETSTENN | APSQEAELPF | SKWSPSKYIW | RGLSVPIIAG | QVVLRILKGK |
| 130 | 140 | 150 | 160 | 170 | 180 |
| IHWRNTLQQL | ERTGPKSLGV | CLLTSTFVGM | AFTIQFVREF | TRLGLNRSIG | GVLALAFSRE |
| 190 | 200 | 210 | 220 | 230 | 240 |
| LSPVITSIVV | AGRMGSAFAA | ELGTMQVSEQ | TDTLRVLGAD | PIDYLITPRV | IASCLALPFL |
| 250 | 260 | 270 | 280 | 290 | 300 |
| TLMCFTVGMA | SSALLSDAVY | GISINIIMDS | AHRALRPWDI | VSAMIKSQVF | GAIISVISCS |
| 310 | 320 | 330 | 340 | ||
| WGVTTTGGAK | GVGESTTSAV | VMSLVGIFIA | DFVLSSFFFQ | GAGDSLKNCV |