Q8GYH6
Gene name |
RTNLB16 (At3g10915, F9F8.30) |
Protein name |
Reticulon-like protein B16 |
Names |
AtRTNLB16 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT3G10915 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q8GYH6
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q8GYH6-F1 | Predicted | AlphaFoldDB |
17 variants for Q8GYH6
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_3_3417490_C_A | 3 | S>I | No | 1000Genomes | |
| ENSVATH05806673 | 13 | G>E | No | 1000Genomes | |
| tmp_3_3417448_C_A | 17 | G>V | No | 1000Genomes | |
| tmp_3_3417403_A_G | 32 | V>A | No | 1000Genomes | |
| tmp_3_3417028_A_C | 44 | L>V | No | 1000Genomes | |
| ENSVATH10594834 | 72 | L>S | No | 1000Genomes | |
| ENSVATH00316159 | 84 | I>M | No | 1000Genomes | |
| ENSVATH05806657 | 91 | V>G | No | 1000Genomes | |
| ENSVATH05806658 | 91 | V>L | No | 1000Genomes | |
| tmp_3_3416877_C_T | 94 | R>Q | No | 1000Genomes | |
| ENSVATH05806653 | 104 | H>N | No | 1000Genomes | |
| tmp_3_3416748_G_A | 105 | S>L | No | 1000Genomes | |
| tmp_3_3416697_G_A | 122 | S>F | No | 1000Genomes | |
| tmp_3_3416487_C_T | 158 | A>T | No | 1000Genomes | |
| tmp_3_3416209_G_C | 191 | D>E | No | 1000Genomes | |
| ENSVATH10594828 | 192 | K>N | No | 1000Genomes | |
| ENSVATH05806638 | 203 | H>Y | No | 1000Genomes |
No associated diseases with Q8GYH6
1 regional properties for Q8GYH6
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Reticulon | 41 - 224 | IPR003388 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| response to bacterium | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDSLSDIDGD | FDGRNEGGSS | SDYRLLGRQI | TVHQFMGGGK | AADLLLWRRR | HLSLGVIIIS |
| 70 | 80 | 90 | 100 | 110 | 120 |
| TVAWLIFEFS | GLPFLSVSSD | VLLIVIMISF | VHARVSAFRN | RQLHSLPELV | LSEEMVNSAA |
| 130 | 140 | 150 | 160 | 170 | 180 |
| ASFRIKLNHL | LVMAHDVTVG | NDFRLFFKVV | ICLWLLSAIG | SYISLCTLLY | IGTILSVTIP |
| 190 | 200 | 210 | 220 | ||
| ALYSKYQSKV | DKCCGTIHRR | LSHHYKIVDE | NVISRLSWSL | SKDKDS |