Q8FA88

PR
Gene name
symE
Protein name
Endoribonuclease SymE
Names
Species
Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
KEGG Pathway
ecc:c5422
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

48-113 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q8FA88

Entry ID Method Resolution Chain Position Source
AF-Q8FA88-F1 Predicted AlphaFoldDB

No variants for Q8FA88

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q8FA88

No associated diseases with Q8FA88

12 regional properties for Q8FA88

Type Name Position InterPro Accession
repeat HAT (Half-A-TPR) repeat 63 - 95 IPR003107-1
repeat HAT (Half-A-TPR) repeat 107 - 139 IPR003107-2
repeat HAT (Half-A-TPR) repeat 141 - 175 IPR003107-3
repeat HAT (Half-A-TPR) repeat 291 - 326 IPR003107-4
repeat HAT (Half-A-TPR) repeat 394 - 432 IPR003107-5
repeat HAT (Half-A-TPR) repeat 434 - 470 IPR003107-6
repeat HAT (Half-A-TPR) repeat 524 - 556 IPR003107-7
repeat HAT (Half-A-TPR) repeat 558 - 592 IPR003107-8
repeat HAT (Half-A-TPR) repeat 595 - 629 IPR003107-9
repeat HAT (Half-A-TPR) repeat 667 - 701 IPR003107-10
repeat HAT (Half-A-TPR) repeat 703 - 737 IPR003107-11
repeat Tetratricopeptide repeat 421 - 449 IPR019734

Functions

Description
EC Number
Subcellular Localization
  • Cytoplasm
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

3 GO annotations of molecular function

Name Definition
DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
endoribonuclease activity Catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks.
RNA binding Binding to an RNA molecule or a portion thereof.

No GO annotations of biological process

Name Definition
No GO annotations for biological process

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MTDTHSIAQP FEAEVSPANN RQLTVSYASR YPDYSRIPAI TLKGQWLEAA GFATGTVVDV
70 80 90 100 110
KVMEGCIVLT AQPPAAAESE LMQSLRQVCK LSARKQRQVQ EFIGVIAGKQ KVA