Q8AVP1
Gene name |
rpf1 (bxdc5) |
Protein name |
Ribosome production factor 1 |
Names |
Brix domain-containing protein 5, Ribosome biogenesis protein RPF1 |
Species |
Xenopus laevis (African clawed frog) |
KEGG Pathway |
xla:379964 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q8AVP1
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q8AVP1-F1 | Predicted | AlphaFoldDB |
No variants for Q8AVP1
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q8AVP1 | |||||
No associated diseases with Q8AVP1
1 regional properties for Q8AVP1
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Brix domain | 136 - 319 | IPR007109 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| RNA binding | Binding to an RNA molecule or a portion thereof. |
| rRNA primary transcript binding | Binding to an unprocessed ribosomal RNA transcript. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| rRNA processing | Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAEKKGPEAK | KQKKMKNKSK | VEETDAGEEA | GASEEQQQVT | RLPPAFSLSE | IKNKQRRQFM |
| 70 | 80 | 90 | 100 | 110 | 120 |
| FIKLKQEKRK | EKLILRKKRK | KEREALGDKA | PPKPVPKTIE | NQRVYDETTV | DPADEEVALD |
| 130 | 140 | 150 | 160 | 170 | 180 |
| EATDEFAPYF | NKQTTPKILI | TTSDRPRGRS | VRFTEQLSSI | IPNSDVYYRR | GLALKKIIPQ |
| 190 | 200 | 210 | 220 | 230 | 240 |
| CVSRDYTDLL | VINEDRKVPN | GLVLCHLPDG | PTAHFKISNV | RLRKEMKRKG | KEPTEHKPEV |
| 250 | 260 | 270 | 280 | 290 | 300 |
| ILNNFTTRLG | HSIGRMFASL | YPHDPHFVGR | QVATFHNQRD | YIFFRYHRYL | FKSEKKVGIQ |
| 310 | 320 | 330 | 340 | ||
| ELGPRFTLKL | RSLQKGTFDS | KYGEYEWVHK | RHEMDTSRRK | FHL |