Q89W63
Gene name |
dnaA |
Protein name |
Chromosomal replication initiator protein DnaA |
Names |
|
Species |
Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) |
KEGG Pathway |
bja:bll0830 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q89W63
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q89W63-F1 | Predicted | AlphaFoldDB |
No variants for Q89W63
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q89W63 | |||||
No associated diseases with Q89W63
5 regional properties for Q89W63
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | AAA+ ATPase domain | 163 - 289 | IPR003593 |
| domain | Chromosomal replication initiator, DnaA C-terminal | 378 - 468 | IPR013159 |
| domain | Chromosomal replication initiator protein DnaA | 128 - 351 | IPR013317 |
| conserved_site | Chromosomal replication control, initiator DnaA, conserved site | 428 - 447 | IPR018312 |
| domain | DnaA N-terminal domain | 8 - 68 | IPR024633 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| DNA replication origin binding | Binding to a DNA replication origin, a unique DNA sequence of a replicon at which DNA replication is initiated and proceeds bidirectionally or unidirectionally. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| DNA replication | The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA. |
| DNA replication initiation | The process in which DNA-dependent DNA replication is started; this begins with the ATP dependent loading of an initiator complex onto the DNA, this is followed by DNA melting and helicase activity. In bacteria, the gene products that enable the helicase activity are loaded after the initial melting and in archaea and eukaryotes, the gene products that enable the helicase activity are inactive when they are loaded and subsequently activate. |
| regulation of DNA replication | Any process that modulates the frequency, rate or extent of DNA replication. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MNTSEQDRWS | RVKGRLRSSV | GEDIYTSWFA | RMDLEDVQDE | SVRLSVPTRF | LKSWIQAHYA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| ERVLSCWQAE | MPEVHRIDLT | VRSAVRPVAP | PKEAPAPVET | RRAPAPELRS | TATAPVSANH |
| 130 | 140 | 150 | 160 | 170 | 180 |
| DALGGSPLDP | RLTFASFVIG | RSNTLAHAAA | RQVAEGRRGD | PVMFNPLYIH | AGVGLGKTHL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| LQAVTWAGNS | GNERKVLYLT | AEKFMYGFVA | ALKTQTALAF | KEALRGIDVL | VIDDLQFLQG |
| 250 | 260 | 270 | 280 | 290 | 300 |
| KSTQAEFCHT | LNALIDAGRQ | VVIAADRPPS | DLESLDDRVR | SRLAGGLVVE | MGSLGEELRH |
| 310 | 320 | 330 | 340 | 350 | 360 |
| GILKSRVAAA | RAHHATFDVP | EEVLHYLART | ITHNGRDLEG | AINRLLAHSK | LNNQPVTLEM |
| 370 | 380 | 390 | 400 | 410 | 420 |
| AEREVRDLVR | PQEPKRIKIE | DIQRVVARQY | NVSRSDLLSS | RRTANVVRPR | QVAMYLAKTL |
| 430 | 440 | 450 | 460 | ||
| TLRSLPEIGR | RFGGRDHTTV | LHAVRKIEAL | VSKDTALSEE | VESLKRQLQE |