Q88DV7
Gene name |
infB |
Protein name |
Translation initiation factor IF-2 |
Names |
|
Species |
Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) |
KEGG Pathway |
ppu:PP_4712 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q88DV7
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q88DV7-F1 | Predicted | AlphaFoldDB |
No variants for Q88DV7
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q88DV7 | |||||
No associated diseases with Q88DV7
6 regional properties for Q88DV7
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | ABC transporter-like, ATP-binding domain | 6 - 244 | IPR003439 |
| domain | AAA+ ATPase domain | 34 - 221 | IPR003593 |
| domain | ABC3 transporter permease protein domain | 530 - 644 | IPR003838 |
| conserved_site | ABC transporter-like, conserved site | 146 - 160 | IPR017871 |
| domain | MacB, ATP-binding domain | 6 - 222 | IPR017911 |
| domain | MacB-like periplasmic core domain | 275 - 494 | IPR025857 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| GTP binding | Binding to GTP, guanosine triphosphate. |
| GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + H+ + phosphate. |
| translation initiation factor activity | Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide. |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MTQVTVKELA | QEVEAPVERL | LQQMREAGLP | HTDAGQVVTD | NEKQTLLTHL | KSSHKSKAEE |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PRKITLQRKT | TSTLRVAGSK | SISVEVRKKK | VFVQRSPEEI | QAEQKRELDE | RRAAENAARD |
| 130 | 140 | 150 | 160 | 170 | 180 |
| KVEAEVRQRN | EEQARRQAAG | SAAAAPAPAA | KPEPAPAAAP | VAAPAPVVAD | APASEDAAAR |
| 190 | 200 | 210 | 220 | 230 | 240 |
| AAERKKDETR | RNESRTRDDD | RRRGEAPRVS | IKVKVKEKEK | APTPRAAPRT | TDEESDGARR |
| 250 | 260 | 270 | 280 | 290 | 300 |
| GRGGKSKLKK | RNQHGFQNPT | GPVIRDVTIG | ETITVSELAN | QMSVKGAEVV | KFMFKMGTPV |
| 310 | 320 | 330 | 340 | 350 | 360 |
| TINQVLDQET | AQLIAEELGH | KVTLVSDTAL | EDSLAESLKF | EGQTESRAPV | VTVMGHVDHG |
| 370 | 380 | 390 | 400 | 410 | 420 |
| KTSLLDYIRR | AKVAAGEAGG | ITQHIGAYHV | ETDRGMVTFL | DTPGHAAFTQ | MRARGAKATD |
| 430 | 440 | 450 | 460 | 470 | 480 |
| IVILVVAADD | GVMPQTREAV | QHAKAAGVPL | VVAVNKIDKP | GADLDRIRNE | LSVEGVTSED |
| 490 | 500 | 510 | 520 | 530 | 540 |
| WGGDTPFVKV | SAKMGTGVDE | LLEAVLLQAE | ILELTATPTA | PGRGVVVESR | LDKGRGPVAT |
| 550 | 560 | 570 | 580 | 590 | 600 |
| ILVQDGTLRQ | GDMVLCGSNY | GRVRAMLDEN | GKPVKEAGPS | IPVEILGLDG | TPEAGDELSV |
| 610 | 620 | 630 | 640 | 650 | 660 |
| VADEKKAREV | ALFRQGKYRE | VKLARAHAGK | LENIFETMGQ | EEKKTLNIVL | KTDVRGSLEA |
| 670 | 680 | 690 | 700 | 710 | 720 |
| LQGSLGGLGN | DEVQVRVIGG | GVGGITESDA | NLALASNAVL | FGFNVRADAG | ARKIVEQEGL |
| 730 | 740 | 750 | 760 | 770 | 780 |
| DMRYYNVIYD | IIEDVKKALT | GMLGSDVREN | ILGVAEVRDV | FRSPKFGAIA | GCMVIEGTVY |
| 790 | 800 | 810 | 820 | 830 | 840 |
| RNRPIRVLRD | DVVIFEGELE | SLRRFKDDAS | EVRSGMECGI | GVKSYNDVKV | GDKIEVFEKV |
| QVARTL |