Q87VN8

PR
Gene name
cbpA
Protein name
Curved DNA-binding protein
Names
Species
Pseudomonas syringae pv tomato (strain ATCC BAA-871 / DC3000)
KEGG Pathway
pst:PSPTO_4897
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

28-193 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q87VN8

Entry ID Method Resolution Chain Position Source
AF-Q87VN8-F1 Predicted AlphaFoldDB

No variants for Q87VN8

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q87VN8

No associated diseases with Q87VN8

4 regional properties for Q87VN8

Type Name Position InterPro Accession
domain Poly A polymerase, head domain 1 - 122 IPR002646
domain HD/PDEase domain 231 - 334 IPR003607
domain HD domain 228 - 329 IPR006674
domain tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain 149 - 212 IPR032828

Functions

Description
EC Number
Subcellular Localization
  • Cytoplasm, nucleoid
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

2 GO annotations of cellular component

Name Definition
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
nucleoid The region of a virus, bacterial cell, mitochondrion or chloroplast to which the nucleic acid is confined.

2 GO annotations of molecular function

Name Definition
bent DNA binding Binding to DNA in a bent conformation.
unfolded protein binding Binding to an unfolded protein.

1 GO annotations of biological process

Name Definition
protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MDFKDYYKIL DVEPAADDKA IKTAYRKLAR KYHPDVSKEA GAEDKFKEAS EAYEVLSSPE
70 80 90 100 110 120
KRAEYDELRK YGRQGRPFQT PPGWQSRAGA GAGGFEETAD FSEFFSSIFG GRPQQGGRTR
130 140 150 160 170 180
NPGRKGQDVE MELAVFLEET LSGESKQVSF KVPQHSPNGQ RMGDITKTLN VKIPAGVVDG
190 200 210 220 230 240
ERIRLKGQGA PGIGGGANGD LYLIIRLAPH PMFEVEGHDL VITVPLAPWE AALGTKVAVP
250 260 270 280 290 300
TLTSRLNLTI RPDSQNGQRL RIKGNGLMNK SGERGDLYAQ LKIVMPKQTD EAARALWQKL
310
ADSAAFDPRA QWKG