Q87N07

PR
Gene name
metG
Protein name
Methionine--tRNA ligase
Names
Methionyl-tRNA synthetase, MetRS
Species
Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
KEGG Pathway
vpa:VP2069
EC number
6.1.1.10: Ligases forming aminoacyl-tRNA and related compounds
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

523-607 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q87N07

Entry ID Method Resolution Chain Position Source
AF-Q87N07-F1 Predicted AlphaFoldDB

No variants for Q87N07

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q87N07

No associated diseases with Q87N07

7 regional properties for Q87N07

Type Name Position InterPro Accession
conserved_site Aminoacyl-tRNA synthetase, class I, conserved site 20 - 31 IPR001412
domain tRNA-binding domain 587 - 688 IPR002547
domain Methionyl-tRNA synthetase, beta subunit, C-terminal 549 - 688 IPR004495
domain Methionyl/Leucyl tRNA synthetase 14 - 401 IPR015413
domain Methioninyl-tRNA synthetase core domain 12 - 376 IPR033911-1
domain Methioninyl-tRNA synthetase core domain 389 - 400 IPR033911-2
domain Methionyl-tRNA synthetase, anticodon-binding domain 379 - 545 IPR041872

Functions

Description
EC Number 6.1.1.10 Ligases forming aminoacyl-tRNA and related compounds
Subcellular Localization
  • Cytoplasm
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

4 GO annotations of molecular function

Name Definition
ATP binding Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
metal ion binding Binding to a metal ion.
methionine-tRNA ligase activity Catalysis of the reaction: ATP + L-methionine + tRNA(Met) = AMP + diphosphate + L-methionyl-tRNA(Met).
tRNA binding Binding to a transfer RNA.

1 GO annotations of biological process

Name Definition
methionyl-tRNA aminoacylation The process of coupling methionine to methionyl-tRNA, catalyzed by methionyl-tRNA synthetase. The methionyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a methionine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MANDPRHLPS RKLLVTCALP YANGSIHLGH MLEHIQADIW VRYQRLRGNT VNFICADDAH
70 80 90 100 110 120
GTPIMLKAQQ MGITPEEMIA AVSEEHQKDF AGFDISFDNY HSTHSEENRE LASHIYLELK
130 140 150 160 170 180
KNGFISSRTI SQLFDPEKEM FLPDRFVKGT CPKCKSEDQY GDNCDNCGET YSPTELINPK
190 200 210 220 230 240
SAVSGATPVM KDSEHFFFDL PQFESMLKEW TRSGSLQSET ANKMQEWFES GLQQWDISRD
250 260 270 280 290 300
APYFGFEIPG EKDKFFYVWL DAPIGYMGSF KNLCNKRDDL DFDEYWNKDS KTELYHFIGK
310 320 330 340 350 360
DIVYFHSLFW PAMLEGSGFR KPNNVFVHGY VTVNGAKMSK SKGTFVKAST YLDHLDPECL
370 380 390 400 410 420
RYYYAAKLNS RIDDLDLNLE DFTQRVNADV VNKIVNLASR NAGFIAKRFE GKLSDNFAEP
430 440 450 460 470 480
ELYNEFVAAA DRIAELFEAR EFGRAIREIT ALADKANQYV DEKAPWVVAK EEGKDQELQE
490 500 510 520 530 540
ICSVGINLFR VLMTYLKPVM PALAARTEAF LNQELTWEGI AQPLTGHEIT KFKALFNRID
550 560 570 580 590 600
PKNIEAMIEA SKEDAAAEMA AKEKAEAAKT ETELSKDPIA DEIEFDTFAQ VDLRIARIIS
610 620 630 640 650 660
CEEVPKANKL LKFQLDIGGE TRQVFSGIKS AYKPEELEGK LTVMVANLKP RKMKFGMSEG
670 680
MILAAGPGGS DLWILEPHEG AQPGMRVM