Q86SX3
Gene name |
TEDC1 |
Protein name |
Tubulin epsilon and delta complex protein 1 |
Names |
|
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:283643 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q86SX3
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q86SX3-F1 | Predicted | AlphaFoldDB |
526 variants for Q86SX3
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1555439211 CA391187345 |
2 | G>E | No |
ClinGen gnomAD |
|
|
CA391187387 rs1595468642 |
4 | R>P | No |
ClinGen Ensembl |
|
|
rs1595468638 CA391187383 |
4 | R>W | No |
ClinGen Ensembl |
|
|
CA266580068 rs983489160 |
5 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1555439212 CA391187396 |
5 | R>W | No |
ClinGen gnomAD |
|
|
CA391187459 rs1380590449 |
7 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA391187520 rs1299035556 |
9 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
CA266580093 rs942266793 |
12 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1172327769 CA391187695 |
14 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1595468702 CA391187703 |
14 | A>V | No |
ClinGen Ensembl |
|
|
rs1555439220 CA391187709 |
15 | R>W | No |
ClinGen gnomAD |
|
|
rs1555439222 CA391187777 |
16 | A>G | No |
ClinGen gnomAD |
|
|
CA391187760 rs1555439222 |
16 | A>V | No |
ClinGen gnomAD |
|
|
CA391187802 rs1478671847 |
17 | G>E | No |
ClinGen TOPMed |
|
|
CA391187810 rs1595468732 |
18 | A>D | No |
ClinGen Ensembl |
|
|
CA391187852 rs1044626528 |
20 | P>S | No |
ClinGen TOPMed |
|
|
rs1044626528 CA266580095 |
20 | P>T | No |
ClinGen TOPMed |
|
|
CA391187883 rs1476559203 |
22 | A>G | No |
ClinGen TOPMed |
|
|
rs1555439229 CA391187878 |
22 | A>T | No |
ClinGen gnomAD |
|
|
CA391187916 rs1555439231 |
23 | I>M | No |
ClinGen gnomAD |
|
|
rs1261768483 CA391187894 |
23 | I>V | No |
ClinGen TOPMed |
|
|
CA391187947 rs1555439233 |
25 | A>T | No |
ClinGen gnomAD |
|
|
rs1555439234 CA391187981 |
26 | L>W | No |
ClinGen gnomAD |
|
|
rs587594638 CA266580097 |
28 | R>Q | No |
ClinGen 1000Genomes |
|
|
rs1555439240 CA391188059 |
29 | S>L | No |
ClinGen gnomAD |
|
|
rs1276288681 CA391188103 |
31 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs938866683 CA266580100 |
31 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA391188113 rs1199641851 |
32 | S>A | No |
ClinGen TOPMed |
|
|
CA391188119 rs1345703853 |
32 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA391188120 rs1257682919 CA391188121 |
33 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1339969591 CA391188155 |
36 | P>S | No |
ClinGen TOPMed |
|
|
CA391188209 rs1402124805 |
39 | F>C | No |
ClinGen TOPMed gnomAD |
|
|
CA391188208 rs1402124805 |
39 | F>S | No |
ClinGen TOPMed gnomAD |
|
|
CA391188203 rs1555439245 |
39 | F>V | No |
ClinGen gnomAD |
|
|
rs896261752 CA266580106 |
40 | R>C | No |
ClinGen Ensembl |
|
|
rs1555439254 CA391188227 |
41 | R>C | No |
ClinGen gnomAD |
|
|
rs1555439256 CA391188255 |
43 | K>Q | No |
ClinGen gnomAD |
|
|
CA391188258 rs1333991552 |
43 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA391188257 rs1333991552 |
43 | K>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1009710023 CA266580107 |
45 | D>E | No |
ClinGen Ensembl |
|
|
rs1555439265 CA391188305 |
46 | R>H | No |
ClinGen gnomAD |
|
|
CA391188307 rs1555439265 |
46 | R>L | No |
ClinGen gnomAD |
|
|
rs1415402359 CA391188312 |
47 | P>T | No |
ClinGen TOPMed |
|
|
rs1595469104 CA391188379 |
51 | S>F | No |
ClinGen Ensembl |
|
|
CA391188391 rs781787303 |
53 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA391188395 rs1555439321 |
53 | L>P | No |
ClinGen gnomAD |
|
|
rs781787303 CA7390946 |
53 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1555439328 CA391188402 |
54 | W>* | No |
ClinGen gnomAD |
|
|
CA391188411 rs1555439331 |
55 | Q>K | No |
ClinGen gnomAD |
|
|
rs1162296252 CA391188427 |
56 | L>H | No |
ClinGen TOPMed gnomAD |
|
|
CA391188429 rs1162296252 |
56 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs782609371 CA7390948 |
58 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7390949 rs782231587 |
60 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1555439349 CA391188475 |
61 | L>F | No |
ClinGen gnomAD |
|
|
CA266580311 rs983906045 |
62 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA391188498 rs11554478 |
63 | P>L | No |
ClinGen Ensembl |
|
|
rs1238712587 CA391188493 |
63 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA266580316 rs909216811 |
64 | L>I | No |
ClinGen gnomAD |
|
|
CA391188499 rs909216811 |
64 | L>V | No |
ClinGen gnomAD |
|
|
CA391188507 rs1567071997 |
65 | P>A | No |
ClinGen Ensembl |
|
|
rs76054490 CA7390952 |
65 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1555439362 CA391188514 |
66 | A>T | No |
ClinGen gnomAD |
|
|
rs1555439363 CA391188521 |
66 | A>V | No |
ClinGen gnomAD |
|
|
CA391188526 rs1358694723 |
67 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA7390953 rs587675709 |
67 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA391188527 rs1358694723 |
67 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs587744754 CA266580333 |
68 | N>K | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA391188535 rs1555439369 |
68 | N>S | No |
ClinGen gnomAD |
|
|
CA391188543 rs1555439370 |
69 | A>S | No |
ClinGen gnomAD |
|
|
rs781939530 CA7390954 |
70 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA391188563 rs938897682 |
71 | A>E | No |
ClinGen gnomAD |
|
| TCGA novel | 71 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs938897682 CA266580334 |
71 | A>V | No |
ClinGen gnomAD |
|
|
rs782086865 CA7390955 |
72 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1555439386 CA391188591 |
74 | A>G | No |
ClinGen gnomAD |
|
|
CA391188588 rs1347633799 |
74 | A>S | No |
ClinGen TOPMed |
|
|
rs1405643770 CA391188598 |
75 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1405643770 CA391188600 |
75 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
rs373402464 CA7390956 |
75 | L>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7390958 rs782135409 |
76 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1555439522 CA391188673 |
77 | V>A | No |
ClinGen gnomAD |
|
|
rs782787250 CA7390984 |
77 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391188666 rs782787250 |
77 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391188667 rs782787250 |
77 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391188715 rs587618908 |
79 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7390986 rs587618908 |
79 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7390988 rs782451914 |
80 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7390989 rs782451914 |
80 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs181709041 CA7390990 |
80 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 82 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA391188855 rs1168163429 |
87 | C>R | No |
ClinGen TOPMed |
|
|
rs1476168566 CA391188874 |
88 | S>P | No |
ClinGen TOPMed |
|
|
rs781965220 CA7390996 |
92 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782155658 CA7391000 |
95 | A>T | No |
ClinGen ExAC |
|
|
rs781863269 CA266580710 |
95 | A>V | No |
ClinGen Ensembl |
|
|
rs959989840 CA266580717 |
96 | L>V | No |
ClinGen Ensembl |
|
|
CA391189082 rs1567072507 |
98 | Q>* | No |
ClinGen Ensembl |
|
|
rs1457386062 CA391189099 |
98 | Q>H | No |
ClinGen TOPMed |
|
|
rs782695146 CA7391001 |
99 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA7391003 rs782107920 |
100 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs185620086 CA7391002 |
100 | P>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA7391005 rs781879165 |
101 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs782819389 CA7391007 |
102 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391189208 rs1555439566 |
102 | D>E | No |
ClinGen gnomAD |
|
|
rs782819389 CA7391008 |
102 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782529386 CA7391006 |
102 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368575867 CA7391009 |
104 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA391189287 rs1555439571 |
106 | G>V | No |
ClinGen gnomAD |
|
|
CA7391012 rs190336306 |
107 | S>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7391013 rs587677061 |
107 | S>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs587677061 CA391189307 |
107 | S>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs180744711 CA7391015 |
108 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs587683388 COSM1368707 CA7391014 |
108 | R>W | Variant assessed as Somatic; 0.0002821 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA7391017 rs782186927 |
109 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA391189539 rs1162505412 |
118 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1595470340 CA391189540 |
119 | A>T | No |
ClinGen Ensembl |
|
|
CA7391022 rs781817985 |
120 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391189557 rs782053307 |
120 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782053307 CA7391023 |
120 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7391024 rs201690661 |
121 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1555439599 CA391189584 |
122 | P>H | No |
ClinGen gnomAD |
|
|
CA7391025 rs781818686 |
123 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1176733549 CA391189593 |
123 | V>M | No |
ClinGen TOPMed |
|
|
CA391189656 rs1555439602 |
125 | E>D | No |
ClinGen gnomAD |
|
|
CA7391028 rs373315186 |
125 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA391189619 rs373315186 |
125 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782528643 CA7391030 |
127 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA7391029 rs782528643 |
127 | M>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 128 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7391031 rs781784997 |
129 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391189744 rs1555439604 |
129 | A>V | No |
ClinGen gnomAD |
|
|
CA7391033 rs782614506 |
132 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs587708518 CA7391034 |
132 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs587708518 CA391189793 |
132 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1595470411 CA391189817 |
133 | V>G | No |
ClinGen Ensembl |
|
|
rs200813738 CA266580895 |
133 | V>L | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs377507500 CA7391035 |
134 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA391189832 rs377507500 |
134 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7391037 rs782297610 |
136 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA7391036 rs782674304 |
136 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7391039 rs782308934 |
137 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs370719810 CA266580903 |
137 | D>G | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs782084018 CA7391040 |
138 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782354765 CA7391041 |
139 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391189946 rs1555439618 |
140 | T>S | No |
ClinGen gnomAD |
|
|
rs781981411 CA7391043 |
141 | V>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 142 | C>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1480795063 CA391190145 |
145 | E>G | No |
ClinGen TOPMed |
|
|
rs1176112649 CA391190137 |
145 | E>K | No |
ClinGen TOPMed |
|
|
rs1555439682 CA391190158 |
146 | A>S | No |
ClinGen gnomAD |
|
|
rs587754406 CA391190195 |
148 | A>P | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA266581191 rs587754406 |
148 | A>T | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs782383449 CA7391060 |
148 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs587652095 CA7391062 |
149 | S>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1555439689 CA391190235 |
150 | P>R | No |
ClinGen gnomAD |
|
|
rs1248142038 CA391190260 |
152 | P>L | No |
ClinGen TOPMed |
|
|
CA7391063 rs74091203 |
155 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA266581213 rs781995112 |
155 | P>H | No |
ClinGen gnomAD |
|
|
CA391190309 rs781995112 |
155 | P>R | No |
ClinGen gnomAD |
|
|
CA266581209 rs74091203 |
155 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1555439699 CA391190315 |
156 | H>D | No |
ClinGen gnomAD |
|
|
rs781931988 CA7391064 |
156 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs112340345 CA7391065 |
157 | M>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA391190354 rs899079849 |
157 | M>R | No |
ClinGen TOPMed gnomAD |
|
|
rs899079849 CA266581216 |
157 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1555439703 CA391190337 |
157 | M>V | No |
ClinGen gnomAD |
|
|
rs1555439706 CA391190384 |
159 | A>S | No |
ClinGen gnomAD |
|
|
rs1555439707 CA391190402 |
159 | A>V | No |
ClinGen gnomAD |
|
|
rs1555439708 CA391190445 |
160 | E>D | No |
ClinGen gnomAD |
|
|
CA391190467 rs1555439712 |
161 | G>C | No |
ClinGen gnomAD |
|
|
CA391190450 rs1555439712 |
161 | G>S | No |
ClinGen gnomAD |
|
|
CA391190478 rs1366629961 |
162 | P>T | No |
ClinGen TOPMed |
|
|
CA391190550 rs1363727846 |
164 | D>E | No |
ClinGen TOPMed |
|
|
CA266581223 rs375089933 |
164 | D>H | No |
ClinGen ESP TOPMed |
|
|
rs782004369 CA7391067 |
166 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7391068 rs782151431 |
166 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391190576 rs782151431 |
166 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs587680986 CA7391069 |
167 | H>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1555439731 CA391190717 |
172 | M>T | No |
ClinGen gnomAD |
|
|
rs1490077683 CA391190770 |
175 | L>R | No |
ClinGen TOPMed |
|
|
rs1224434227 CA391190781 |
176 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA7391071 rs782457605 |
176 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781843164 CA391190816 |
178 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7391073 rs781843164 |
178 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7391072 rs369945102 |
178 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372232345 CA7391074 |
180 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA266581262 rs587638935 COSM1732776 |
180 | R>H | Variant assessed as Somatic; 0.0 impact. pancreas [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes NCI-TCGA TOPMed gnomAD |
|
rs1404622182 CA391190869 |
181 | Q>* | No |
ClinGen TOPMed |
|
|
CA266581270 rs1033255212 CA391190881 |
181 | Q>H | No |
ClinGen gnomAD |
|
|
CA391190872 rs1555439737 |
181 | Q>P | No |
ClinGen gnomAD |
|
|
CA391190903 rs1555439742 |
183 | V>A | No |
ClinGen gnomAD |
|
|
rs1555439742 CA391190904 |
183 | V>G | No |
ClinGen gnomAD |
|
|
CA391190898 rs1555439741 CA391190899 |
183 | V>L | No |
ClinGen gnomAD |
|
|
rs1555439748 CA391190983 |
186 | Q>* | No |
ClinGen gnomAD |
|
|
CA391191014 rs1289994268 |
187 | Q>R | No |
ClinGen TOPMed |
|
|
CA266581296 rs1029808895 |
188 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA266581295 rs996992355 |
188 | E>K | No |
ClinGen TOPMed |
|
|
rs372900449 CA7391076 |
191 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391191110 rs1429558256 |
191 | A>V | No |
ClinGen TOPMed |
|
|
rs113761895 CA266581306 |
192 | L>H | No |
ClinGen Ensembl |
|
| TCGA novel | 192 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1555439766 CA391191170 |
194 | S>N | No |
ClinGen gnomAD |
|
| rs782524294 | 196 | I>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782226694 CA7391096 |
196 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs1595472975 CA391191690 |
197 | H>P | No |
ClinGen Ensembl |
|
|
CA391191734 rs1442269807 |
199 | Y>* | No |
ClinGen TOPMed |
|
|
CA7391101 rs148446003 |
199 | Y>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs148446003 CA391191728 |
199 | Y>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7391102 rs118022421 |
201 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs118022421 CA7391103 |
201 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7391104 rs59080216 |
201 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7391105 rs59080216 |
201 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA391191777 rs1555439977 |
202 | G>A | No |
ClinGen gnomAD |
|
|
CA7391107 rs140812013 |
202 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7391108 rs144656487 |
205 | S>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA391191855 rs934389740 |
206 | D>E | No |
ClinGen gnomAD |
|
| TCGA novel | 206 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs147865275 CA7391109 |
206 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA391191859 rs1555439984 |
207 | Q>E | No |
ClinGen gnomAD |
|
|
rs782726555 CA7391110 |
207 | Q>H | No |
ClinGen ExAC |
|
| TCGA novel | 208 | S>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781819407 CA7391111 |
208 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7391112 rs781819407 |
208 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391191887 rs782759694 |
208 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1555439985 CA391191892 |
209 | L>V | No |
ClinGen gnomAD |
|
|
rs781894955 CA7391115 |
210 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391191927 rs1410848414 |
210 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs781894955 CA7391114 |
210 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7391116 rs782570786 |
211 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA391191960 rs1301880627 |
212 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1595473112 CA391191999 |
214 | V>A | No |
ClinGen Ensembl |
|
|
rs1555439990 CA391192002 |
215 | T>A | No |
ClinGen gnomAD |
|
|
CA7391118 rs782470937 |
215 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs782246489 CA7391120 |
216 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs782631414 CA7391119 |
216 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA7391121 rs371801390 |
219 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs80086621 CA7391122 |
219 | M>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA391192027 rs371801390 |
219 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA266582126 rs947309915 |
220 | L>F | No |
ClinGen Ensembl |
|
|
rs782291389 CA7391124 |
221 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782305933 CA7391125 |
221 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs781932897 CA7391126 |
222 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA7391127 rs782080808 |
223 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA391192070 rs1472814466 |
225 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs59013219 CA7391128 |
225 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7391129 rs201752678 |
226 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201752678 CA7391130 |
226 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1220232694 CA391192079 |
227 | Q>* | No |
ClinGen TOPMed |
|
|
CA391192082 rs1595473222 |
227 | Q>H | No |
ClinGen Ensembl |
|
|
rs782813113 CA7391131 |
227 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1555439997 CA391192085 |
228 | Q>E | No |
ClinGen gnomAD |
|
|
rs1555439999 CA391192089 |
228 | Q>R | No |
ClinGen gnomAD |
|
|
CA391192635 rs1555440329 |
230 | S>A | No |
ClinGen gnomAD |
|
|
CA7391173 rs113070134 |
232 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA391192655 rs1555440332 |
233 | G>E | No |
ClinGen gnomAD |
|
|
CA391192652 rs1377216881 |
233 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1310742816 CA391192659 |
234 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA7391175 rs781837134 |
234 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391192663 rs1294029619 |
235 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA391192671 rs1459425844 |
236 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1459425844 CA391192670 |
236 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
CA391192672 rs1555440340 |
236 | Q>P | No |
ClinGen gnomAD |
|
|
rs782704996 CA7391177 |
238 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
rs587611481 CA266583768 |
242 | Y>F | No |
ClinGen 1000Genomes |
|
|
CA391192790 rs1343181977 |
244 | K>N | No |
ClinGen TOPMed |
|
|
rs782292214 CA391192798 |
245 | C>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7391178 rs782292214 |
245 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA266583795 rs1042322180 |
249 | F>L | No |
ClinGen Ensembl |
|
|
CA391192877 rs1253765605 |
251 | T>A | No |
ClinGen TOPMed |
|
|
CA391192900 rs1485198164 |
252 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs782434998 CA7391180 |
252 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1555440352 CA391192923 |
254 | M>K | No |
ClinGen gnomAD |
|
|
rs1241846641 CA391192953 |
256 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs782595569 CA7391181 |
257 | R>* | No |
ClinGen ExAC gnomAD |
|
|
rs782437205 CA266583802 |
257 | R>T | No |
ClinGen Ensembl |
|
|
rs1555440354 CA391192991 |
259 | F>V | No |
ClinGen gnomAD |
|
|
rs1287713790 CA391193019 |
260 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
CA391193043 rs1555440357 |
261 | N>S | No |
ClinGen gnomAD |
|
|
rs1346494461 CA391193085 |
263 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA391193115 rs1359808530 |
265 | L>Q | No |
ClinGen TOPMed |
|
|
rs1001132182 CA266583810 |
266 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs587674031 CA7391182 |
267 | C>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782366752 CA7391183 |
267 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA391193147 rs782366752 |
267 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA266583851 rs374888760 |
274 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA391193242 rs1555440369 |
274 | P>S | No |
ClinGen gnomAD |
|
|
rs997569746 CA266583859 |
275 | G>A | No |
ClinGen TOPMed |
|
| TCGA novel | 276 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs367946951 CA391193290 CA266583861 |
277 | W>R | No |
ClinGen gnomAD |
|
|
CA391193325 rs1261651654 |
278 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1195119367 CA391193331 |
279 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1255911432 CA391193340 |
280 | P>S | No |
ClinGen TOPMed |
|
|
rs950727415 CA266583879 |
283 | P>S | No |
ClinGen Ensembl |
|
|
rs1555440378 CA391193416 |
284 | G>V | No |
ClinGen gnomAD |
|
|
rs1555440382 CA391193421 |
285 | G>E | No |
ClinGen gnomAD |
|
|
rs1555440381 CA391193418 |
285 | G>W | No |
ClinGen gnomAD |
|
|
rs1234799117 CA391193443 |
287 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA391193486 rs1294761056 |
291 | L>P | No |
ClinGen TOPMed |
|
|
rs1555440387 CA391193542 |
294 | P>L | No |
ClinGen gnomAD |
|
|
rs963640242 CA266583912 |
297 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1555440618 CA391194146 |
299 | L>P | No |
ClinGen gnomAD |
|
|
rs143331574 CA7391198 |
300 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs80142487 CA7391197 |
300 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA391194174 rs1555440623 |
303 | E>Q | No |
ClinGen gnomAD |
|
|
rs1454359879 CA391194185 |
304 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA7391199 rs150970762 |
304 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1174536177 CA391194197 |
305 | E>K | No |
ClinGen TOPMed |
|
|
CA391194212 rs1555440630 |
306 | N>D | No |
ClinGen gnomAD |
|
|
rs1555440632 CA391194228 |
307 | Q>K | No |
ClinGen gnomAD |
|
|
CA7391200 rs781866090 |
308 | R>C | No |
ClinGen ExAC TOPMed |
|
|
rs868961496 CA391194253 |
308 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA7391201 rs782526717 |
310 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391194283 rs1555440637 |
311 | A>T | No |
ClinGen gnomAD |
|
|
CA391194297 rs1260574182 |
312 | V>A | No |
ClinGen TOPMed |
|
|
rs977514520 CA391194293 |
312 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs977514520 CA266584923 |
312 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA391194316 rs200479980 |
314 | A>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA391194306 rs1555440641 |
314 | A>T | No |
ClinGen gnomAD |
|
|
CA7391202 rs200479980 |
314 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA391194331 rs1555440645 |
315 | W>* | No |
ClinGen gnomAD |
|
|
rs782300782 CA7391204 |
316 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs957630414 CA266584924 |
316 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs782587840 CA7391205 |
317 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782201254 CA7391206 |
317 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1555440654 CA391194398 |
319 | E>Q | No |
ClinGen gnomAD |
|
|
rs1555440657 CA391194410 |
319 | E>V | No |
ClinGen gnomAD |
|
|
rs1567076184 CA616255935 |
320 | L>P | No |
ClinGen Ensembl |
|
|
CA391194443 rs782356830 |
321 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA391194440 rs782356830 |
321 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA7391207 rs782356830 |
321 | V>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 322 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs144610042 CA266584957 |
322 | F>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1338216078 CA391194507 |
323 | W>C | No |
ClinGen TOPMed |
|
|
rs200060019 CA7391209 |
324 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs374363839 CA7391208 |
324 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA391194525 rs1595478654 |
325 | W>G | No |
ClinGen Ensembl |
|
|
rs373766264 CA7391228 |
328 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1318421061 CA391194793 |
329 | V>I | No |
ClinGen TOPMed |
|
|
rs138505168 CA7391230 |
330 | L>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7391231 rs782380367 |
331 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391194831 rs1175686672 |
331 | G>D | No |
ClinGen TOPMed |
|
|
CA7391232 rs587735275 |
332 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA266585221 rs782061308 |
334 | A>V | No |
ClinGen Ensembl |
|
|
rs782685957 CA7391234 |
335 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7391233 rs782151673 |
335 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs868951715 CA391194942 |
336 | E>* | No |
ClinGen gnomAD |
|
|
rs1555440753 CA391195016 |
338 | P>L | No |
ClinGen gnomAD |
|
|
CA391195042 rs1555440755 |
339 | A>V | No |
ClinGen gnomAD |
|
|
CA391195079 rs1168748721 |
340 | A>V | No |
ClinGen TOPMed |
|
|
CA391195098 rs1475223387 |
341 | A>S | No |
ClinGen TOPMed |
|
|
rs1555440763 CA391195162 |
342 | S>L | No |
ClinGen gnomAD |
|
|
rs782062954 CA7391236 |
343 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA7391237 rs140430062 |
344 | P>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 344 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7391238 rs150385054 |
344 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1555440772 CA391195212 |
345 | T>A | No |
ClinGen gnomAD |
|
|
CA391195259 rs1555440775 |
347 | L>M | No |
ClinGen gnomAD |
|
|
rs1555440777 CA391195268 |
348 | P>S | No |
ClinGen gnomAD |
|
|
CA391195313 rs1440836283 |
350 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1567076631 CA391195327 |
351 | P>A | No |
ClinGen Ensembl |
|
|
CA7391241 rs781881820 |
352 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs199648972 CA7391242 |
353 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs149522435 CA7391243 |
353 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1555440795 CA391195389 |
354 | G>E | No |
ClinGen gnomAD |
|
|
rs868920456 CA391195365 |
354 | G>R | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 354 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA391195378 rs868920456 |
354 | G>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1379998491 CA391195391 |
355 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA391195405 rs1555440797 |
355 | G>V | No |
ClinGen gnomAD |
|
|
rs369626772 CA7391245 |
356 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA391195416 rs1555440800 |
356 | G>V | No |
ClinGen gnomAD |
|
|
rs374594192 CA7391247 |
357 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1555440803 CA391195453 |
359 | D>E | No |
ClinGen gnomAD |
|
|
rs1555440806 CA391195458 |
360 | L>M | No |
ClinGen gnomAD |
|
| TCGA novel | 361 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782193976 CA266585277 |
362 | V>M | No |
ClinGen gnomAD |
|
|
rs782038842 CA7391249 COSM3689914 |
363 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs782433439 CA7391248 |
363 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782808616 CA266585285 |
367 | A>T | No |
ClinGen gnomAD |
|
|
rs369895322 CA7391251 |
367 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7391253 rs782093997 |
370 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391195658 rs1567076732 |
371 | E>* | No |
ClinGen Ensembl |
|
|
CA7391257 rs782145151 |
373 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs373497678 CA7391256 |
373 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA391195722 rs1555440833 |
374 | E>Q | No |
ClinGen gnomAD |
|
|
CA391195779 rs1197219969 |
376 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs377013279 CA7391259 |
378 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782475967 CA7391260 |
378 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs377013279 CA391195799 |
378 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1595479540 CA391195810 |
379 | R>G | No |
ClinGen Ensembl |
|
|
CA266585377 rs1053366223 |
379 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1011819628 CA266585380 |
380 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA391195847 rs1011819628 |
380 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs200143862 CA7391261 |
380 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA391195860 rs1555440853 |
381 | A>T | No |
ClinGen gnomAD |
|
|
CA7391262 rs371407528 |
381 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1364975434 CA391195904 |
382 | A>V | No |
ClinGen TOPMed |
|
| TCGA novel | 384 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA266585957 rs1052995533 |
387 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1555440992 CA391196086 |
388 | G>R | No |
ClinGen gnomAD |
|
|
rs1555440994 CA391196110 |
389 | G>D | No |
ClinGen gnomAD |
|
|
CA391196097 rs1170572910 |
389 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs202031010 CA7391284 |
392 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7391283 rs782330051 |
392 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7391285 rs782175020 |
393 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1555441000 CA391196222 |
396 | W>G | No |
ClinGen gnomAD |
|
|
rs1555441000 CA391196219 |
396 | W>R | No |
ClinGen gnomAD |
|
|
rs1555441002 CA391196243 |
397 | S>G | No |
ClinGen gnomAD |
|
|
CA391196245 rs1555441003 |
397 | S>N | No |
ClinGen gnomAD |
|
|
CA7391286 rs113336000 |
398 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782458985 CA7391288 |
399 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782021817 COSM1368708 CA7391289 |
399 | A>V | large_intestine Variant assessed as Somatic; 6.448e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA391196302 rs370802481 |
400 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370802481 CA7391292 |
400 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7391291 rs367868489 |
400 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1228853506 CA391196315 |
401 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA7391293 rs200842206 |
401 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782303260 CA7391294 |
402 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA391196356 rs1555441012 |
403 | S>F | No |
ClinGen gnomAD |
|
|
rs1555441011 CA391196343 |
403 | S>P | No |
ClinGen gnomAD |
|
|
CA7391296 rs782228940 |
404 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA7391295 rs368710205 |
404 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA391196399 rs1555441016 |
405 | E>D | No |
ClinGen gnomAD |
|
|
rs1441664279 CA391196382 |
405 | E>Q | No |
ClinGen TOPMed |
|
|
CA391196401 rs1351335853 |
406 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA391196475 rs1555441019 |
409 | K>E | No |
ClinGen gnomAD |
|
|
CA7391298 rs1310152324 |
410 | E>G | No |
ClinGen TOPMed |
|
|
rs1555441021 CA391196512 |
410 | E>K | No |
ClinGen gnomAD |
|
| TCGA novel | 411 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs372669658 CA7391300 |
411 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA391196633 rs1555441023 |
415 | Q>* | No |
ClinGen gnomAD |
|
|
rs782152844 CA7391302 |
416 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs948083230 CA266586031 |
418 | W>G | No |
ClinGen gnomAD |
|
|
CA391196705 rs948083230 |
418 | W>R | No |
ClinGen gnomAD |
|
|
rs367671262 CA7391303 |
419 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7391304 rs371492836 |
420 | R>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs371492836 CA7391305 |
420 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs587693244 CA391196757 |
420 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7391306 rs587693244 |
420 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs782105553 CA7391308 |
422 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7391309 rs76619093 |
424 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782549197 CA7391312 |
425 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA391196886 rs1329651925 |
426 | Q>E | No |
ClinGen TOPMed |
|
|
CA266586098 rs782533597 |
427 | P>S | No |
ClinGen Ensembl |
|
|
rs1290402308 CA391196914 |
428 | H>R | No |
ClinGen TOPMed |
|
|
CA391196953 rs1567077355 |
430 | P>L | No |
ClinGen Ensembl |
|
|
rs1011057618 CA266586102 |
431 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA391196958 rs1344899486 |
431 | H>Y | No |
ClinGen TOPMed |
|
|
CA7391314 rs781805929 |
432 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA7391313 rs369370157 |
432 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782643867 CA7391316 |
434 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA7391317 rs782261461 |
436 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs782261461 CA266586136 |
436 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7391318 rs34137879 |
436 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1555441051 CA391197035 |
438 | D>G | No |
ClinGen gnomAD |
|
|
CA7391319 rs782688538 |
439 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA391197061 rs1555441056 |
441 | A>S | No |
ClinGen gnomAD |
|
|
CA391197078 rs1555441060 |
442 | G>V | No |
ClinGen gnomAD |
|
|
CA391197080 rs1555441061 |
443 | D>N | No |
ClinGen gnomAD |
|
|
CA7391321 rs587670728 |
443 | D>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7391327 rs781999003 |
444 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA7391326 rs781999003 |
444 | R>P | No |
ClinGen ExAC gnomAD |
|
|
CA7391325 rs781999003 |
444 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs200624465 CA7391323 |
444 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7391328 rs781918053 |
445 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1555441073 CA391197104 |
445 | D>Y | No |
ClinGen gnomAD |
|
|
CA391197129 rs201620460 |
447 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7391332 rs201620460 |
447 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7391331 rs147462508 |
447 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782790474 CA7391333 |
448 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs1595480916 CA391197141 |
449 | A>S | No |
ClinGen Ensembl |
|
|
CA7391335 rs782437210 |
450 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs376423697 CA391197150 |
450 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376423697 CA7391334 |
450 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782590162 CA7391336 |
453 | R>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 453 | R>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs139837113 CA7391338 |
454 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs782250848 CA7391340 |
456 | R>G | No |
ClinGen ExAC TOPMed |
|
|
CA391197190 rs1270088884 |
457 | S>G | No |
ClinGen TOPMed |
|
|
CA391197196 rs1555441096 |
457 | S>R | No |
ClinGen gnomAD |
|
|
CA7391342 rs369976314 |
458 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA391197197 rs369976314 |
458 | Q>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7391343 rs142782649 |
458 | Q>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782327514 CA7391344 |
461 | C>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 462 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs373427074 CA7391346 |
464 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA391197243 rs1358206147 |
465 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA266586267 rs928005781 |
466 | L>V | No |
ClinGen TOPMed |
|
|
CA7391348 rs150700739 |
467 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7391349 rs200916915 |
467 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7391350 rs139986633 |
468 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA7391351 rs34156999 |
468 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1130308 CA266586313 |
471 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs1130308 CA7391352 |
471 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs1555441135 CA391197303 |
471 | G>R | No |
ClinGen gnomAD |
|
|
CA391197313 rs1555441141 |
472 | Q>* | No |
ClinGen gnomAD |
|
|
rs782752312 CA7391353 |
472 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA7391354 rs587610951 |
473 | C>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs370166565 CA7391356 |
474 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs117715376 CA7391355 |
474 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1555441145 CA391197384 |
477 | L>V | No |
ClinGen gnomAD |
|
|
CA391197402 rs1212552148 |
479 | R>M | No |
ClinGen TOPMed |
|
|
rs1229710939 CA391197429 |
481 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA7391358 rs782429089 |
481 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA391197450 rs1555441149 |
483 | A>V | No |
ClinGen gnomAD |
|
|
CA7391360 rs140908263 |
484 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs782358864 CA7391361 |
484 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs782358864 CA7391362 |
484 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs782423488 CA7391364 |
485 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA391197466 rs1380403999 |
485 | P>S | No |
ClinGen TOPMed |
|
|
rs1039464393 CA266586400 |
486 | G>S | No |
ClinGen Ensembl |
|
|
rs782342763 CA7391368 |
488 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA391197513 rs1352194035 |
489 | W>R | No |
ClinGen TOPMed |
|
|
CA266586405 rs900877348 |
490 | I>T | No |
ClinGen Ensembl |
|
|
rs143242009 CA7391370 |
491 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA391197546 rs1167410634 |
491 | P>S | No |
ClinGen TOPMed |
|
|
CA7391372 rs781880196 |
492 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1555441164 CA391197564 |
493 | P>R | No |
ClinGen gnomAD |
|
|
CA391197557 rs1555441162 |
493 | P>T | No |
ClinGen gnomAD |
|
|
CA391197573 rs782700947 |
494 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs782700947 CA7391374 |
494 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs782697723 CA7391376 |
495 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7391377 rs782608215 |
495 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 496 | R>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs782536735 CA7391379 |
496 | R>R | No |
ClinGen ExAC gnomAD |
|
|
rs371734454 CA7391381 |
496 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed |
No associated diseases with Q86SX3
1 regional properties for Q86SX3
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Telomere length regulation protein, conserved domain | 434 - 546 | IPR019337 |
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| centriole | A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle. |
| cilium | A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface and of some cytoplasmic parts. Each cilium is largely bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored to a basal body. |
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| positive regulation of smoothened signaling pathway | Any process that activates or increases the frequency, rate or extent of smoothened signaling. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q3UK37 | Tedc1 | Tubulin epsilon and delta complex protein 1 | Mus musculus (Mouse) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MGRRRQRVDP | AAGARAGALP | EAIAALSRSL | PSGPSPEIFR | RAKFDRPEAT | SALWQLLFRV |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LSPLPAGNAL | ASLALEVQAR | LVKSALCSQG | YPRLALAQLP | EDGSQGSREL | LLALSWLLAR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| GPVPEQMLAQ | ARVPLGDEMT | VCQCEALASP | GPPAPHMEAE | GPVDVRHVQW | LMGKLRFRWR |
| 190 | 200 | 210 | 220 | 230 | 240 |
| QLVSSQQEQC | ALLSKIHLYT | RGCHSDQSLS | HLSVTEAEML | RDPEGGQQVS | GAGAAQNLDL |
| 250 | 260 | 270 | 280 | 290 | 300 |
| AYPKCLHSFC | TPGMGPRTFW | NDLWLVCEQP | GLLPGDWAAP | LDPGGASACS | LLSPFRALLR |
| 310 | 320 | 330 | 340 | 350 | 360 |
| TLERENQRLE | AVLAWRRSEL | VFWRWMDTVL | GTCAPEVPAA | ASQPTFLPWV | PERGGGELDL |
| 370 | 380 | 390 | 400 | 410 | 420 |
| VVRELQALEE | ELREAAERRR | AAWEAKAGGC | GRGPEWSAAR | RASREAVEKE | LGALQQCWER |
| 430 | 440 | 450 | 460 | 470 | 480 |
| DGGPAQPHGP | HRLVRREDGA | AGDRDLRAAV | VIRTLRSQEA | CLEAVLRRLQ | GQCRQELARL |
| 490 | |||||
| VGARPGLIWI | PPPGR |