Q85FR7

PR
Gene name
rpoB
Protein name
DNA-directed RNA polymerase subunit beta
Names
PEP, Plastid-encoded RNA polymerase subunit beta, RNA polymerase subunit beta
Species
Cyanidioschyzon merolae (strain NIES-3377 / 10D) (Unicellular red alga)
KEGG Pathway
cme:CymeCp184
EC number
2.7.7.6: Nucleotidyltransferases
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

342-411 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q85FR7

Entry ID Method Resolution Chain Position Source
AF-Q85FR7-F1 Predicted AlphaFoldDB

No variants for Q85FR7

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q85FR7

No associated diseases with Q85FR7

7 regional properties for Q85FR7

Type Name Position InterPro Accession
domain DNA-directed RNA polymerase, subunit 2, hybrid-binding domain 558 - 945 IPR007120
conserved_site RNA polymerase, beta subunit, conserved site 795 - 807 IPR007121
domain RNA polymerase Rpb2, domain 7 947 - 1021 IPR007641
domain RNA polymerase Rpb2, domain 2 117 - 300 IPR007642
domain RNA polymerase, beta subunit, protrusion 46 - 341 IPR007644
domain RNA polymerase Rpb2, domain 3 357 - 425 IPR007645
domain DNA-directed RNA polymerase, beta subunit, external 1 domain 435 - 500 IPR019462

Functions

Description
EC Number 2.7.7.6 Nucleotidyltransferases
Subcellular Localization
  • Plastid, chloroplast
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

2 GO annotations of cellular component

Name Definition
chloroplast A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
DNA-directed RNA polymerase complex A protein complex that possesses DNA-directed RNA polymerase activity.

3 GO annotations of molecular function

Name Definition
DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
DNA-directed 5'-3' RNA polymerase activity Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.
ribonucleoside binding Binding to a ribonucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked to ribose.

1 GO annotations of biological process

Name Definition
DNA-templated transcription The synthesis of an RNA transcript from a DNA template.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MRDLIAVQRN SYYTFLTKSL KEEFDKISPI VDYTGQLELH LITSKMELKP PKITPVQAKR
70 80 90 100 110 120
QDITYSVGMY MPVQLWNHQT GDVRQQMIYF GEIPLMTEDA TFIINGAERV VVNQIVRSPG
130 140 150 160 170 180
VYFQALWDKQ HVRTFEATFM ANRGAWIKYE LDKQKLLWVR LDKNRKMPLV IFLQALGLNL
190 200 210 220 230 240
QEIKPHLTNR EVFERSWENH AVNNTEAALV EFYKKMRPGE PATVHSAKQL LYARFFDPKK
250 260 270 280 290 300
YDLSEVGRYK LNQKLHLDIP LSVHILTTSD LLAGLDYLIQ LCLDRARVDD IDHLANRRLK
310 320 330 340 350 360
CVGELLQNQV RIGLSRLEKL LREKMTIGEK LQPSSLLNPK PLTSAIREFF ASSQLSQFMD
370 380 390 400 410 420
QINPLAELTH KRRISALGAG GLTRERAGFA VRDIHPSHYG RICPIETPEG PNAGLIGSLA
430 440 450 460 470 480
IFARVNRYGF IETPYYPVKK GQVQKSIVYL TADVEDNYRL APADVKYDRE GQICSPIVAV
490 500 510 520 530 540
RYRQEWTTCD ASHVDYMAIS PIQFISAATC LIPFLEHDDA NRALMGSNMQ RQAVPLIRAS
550 560 570 580 590 600
KPYVSTGQEK WMVQGVFSKA DGIVRSVQAT SIRIQHARGP VDYALLKYQK SNQDTCIDYR
610 620 630 640 650 660
PLVWVGEHVV KGQLIAQSAA MDSGELALGQ NVLIAYMPWE GYNFEDAFVI SERLVYEDVY
670 680 690 700 710 720
TSIHIEKYET DARQTKLGAE QITRQIPNVG EHALRQLDEH GIISVGSWVE AGSILVGKIT
730 740 750 760 770 780
PKGESDQPPE GKLLRAIFGE KNQHVKDSSL RMPNGSRGRV IHVRILSRDQ GDELPAGVNI
790 800 810 820 830 840
SVRVSVAVKR VIQVGDKMAG RHGNKGIVAR ILPRCDMPYL PDGTPVDVIL NPLGVPSRMN
850 860 870 880 890 900
VGQLFEALLG LAAHRLRKRI KIVPFDEMYH KEASRIFVHQ QLKRAALSAQ TILYDGRSGE
910 920 930 940 950 960
KFDNAVTVGM AYMLKLVHLV DEKIHARSTG PYSLVTQQPL GGRAQHGGQR LGEMEVWALE
970 980 990 1000 1010 1020
AYGAAYTLQE LLTLKSDDME GRTATLNAIV KAQPIPRGGT PESFKVLMRE LQALGLDVTV
1030
LQLESQALCV MQSKLD