Q85FM7

PR
Gene name
rpoB
Protein name
DNA-directed RNA polymerase subunit beta
Names
PEP, Plastid-encoded RNA polymerase subunit beta, RNA polymerase subunit beta
Species
Adiantum capillus-veneris (Maidenhair fern)
KEGG Pathway
EC number
2.7.7.6: Nucleotidyltransferases
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

300-482 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q85FM7

Entry ID Method Resolution Chain Position Source
AF-Q85FM7-F1 Predicted AlphaFoldDB

No variants for Q85FM7

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q85FM7

No associated diseases with Q85FM7

6 regional properties for Q85FM7

Type Name Position InterPro Accession
domain DNA-directed RNA polymerase, subunit 2, hybrid-binding domain 573 - 980 IPR007120
conserved_site RNA polymerase, beta subunit, conserved site 818 - 830 IPR007121
domain RNA polymerase Rpb2, domain 7 982 - 1055 IPR007641
domain RNA polymerase Rpb2, domain 2 120 - 307 IPR007642
domain RNA polymerase, beta subunit, protrusion 7 - 349 IPR007644
domain RNA polymerase Rpb2, domain 3 368 - 436 IPR007645

Functions

Description
EC Number 2.7.7.6 Nucleotidyltransferases
Subcellular Localization
  • Plastid, chloroplast
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

2 GO annotations of cellular component

Name Definition
chloroplast A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
DNA-directed RNA polymerase complex A protein complex that possesses DNA-directed RNA polymerase activity.

3 GO annotations of molecular function

Name Definition
DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
DNA-directed 5'-3' RNA polymerase activity Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.
ribonucleoside binding Binding to a ribonucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked to ribose.

1 GO annotations of biological process

Name Definition
DNA-templated transcription The synthesis of an RNA transcript from a DNA template.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MPVLPELAQI QFKGFSRFVH QKLLKELENF PKIEDTDKEV EFRSIGNQYQ LTEPSLEERD
70 80 90 100 110 120
AAYQCITYSA DLYVPAQLIC KEDQIVQEED VRLGSIPWMN SGGTFIINGI ARVLVSQILR
130 140 150 160 170 180
SPGIYYNRES DQRGILAYTS TVISDQGGRF KLEIDGRNRI WVRISKKKKI SIFILLVAMG
190 200 210 220 230 240
LCKRDILQNS RYPRIFSNMF KRQKESIESP EDAIVELYKH LYSATDADVF FSESIFRELQ
250 260 270 280 290 300
KRFFQHRCEL GRIGRRNLNI KLTLDVPETE SFLLPQDILA AADHLVEISY GEGKLDDIDH
310 320 330 340 350 360
LKNRRVRSVA DLLQEQLKLA LNRLENLIRQ NLSRAVRRKR AITPRGLVTP VPVIAAFKEF
370 380 390 400 410 420
FGSHPLSQFL DQTNPLSEMV HKRRLSSVGP GGLTRRTASF QARDIHFSHY GRICPIETSE
430 440 450 460 470 480
GMNAGLISSL AIQAGVNTSG SLGSPYLEMS DSSGEEQLVN LSPAEDDYYR VASENLLLSE
490 500 510 520 530 540
WRGSEKEIIP VRYQQEFLSV LWEQVDFRSI HPLHHFSIGA SLIPFIEHND ANRALMGSTM
550 560 570 580 590 600
QRQAVPLIKP ERCIVGTGLE SQVALDSGSV AISEQDGKVC YIDGNRIELS LIHEAKKNKL
610 620 630 640 650 660
AQPTTIEELK IFERSNNNTC MHQKPAVSLG ELLRGGEIVA DGAATVRGEL ALGKNILVAY
670 680 690 700 710 720
MPWEGYNFED AVLISERLIY EDIFTSLHIE KHEVEICATN QGPERVTKQI SQLDGYLLRH
730 740 750 760 770 780
LDDDGLVELG SWVEAGDVLV GKLTPQEGAS SSRVPEGRLL QAIFGIQLVN ARESCLRVPI
790 800 810 820 830 840
GGRGRVIDVR WVYPEDDATN DLEVIHIYIL QRRKIQVGDK IAGRHGNKGI VSKIVPRQDM
850 860 870 880 890 900
PYLQNGTPVD MILSPLGVPS RMNVGQIFEC LLGLAGEFLE THYRVVPFDE RYEREASRKL
910 920 930 940 950 960
VFAELHEAGA RTNNPWLFEP SHPGKSRLID GRTGDPFGQS ITTGKAYIMK LIHQVDDKIH
970 980 990 1000 1010 1020
ARSSGPYALV TQQPLKGKSR RGGQRIGEME VWALEGFGVS YTLQEMLTTK SDHIQARYKA
1030 1040 1050 1060 1070
LSAIMTGKPV CKPKTVPESF RLLVRELRCM GLNLERNFIS EEDLGREFEN I