Q84WU9
Gene name |
At5g56900 (MHM17.1) |
Protein name |
Zinc finger CCCH domain-containing protein 64 |
Names |
AtC3H64 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT5G56900 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q84WU9
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q84WU9-F1 | Predicted | AlphaFoldDB |
63 variants for Q84WU9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_5_23022643_C_T | 10 | D>N | No | 1000Genomes | |
| ENSVATH00738187 | 11 | P>A | No | 1000Genomes | |
| tmp_5_23022631_G_A | 14 | R>C | No | 1000Genomes | |
| tmp_5_23022630_C_T | 14 | R>H | No | 1000Genomes | |
| ENSVATH14636481 | 18 | L>I | No | 1000Genomes | |
| tmp_5_23022607_C_A | 22 | V>F | No | 1000Genomes | |
| tmp_5_23022493_G_T | 31 | P>T | No | 1000Genomes | |
| ENSVATH00738183 | 38 | V>I | No | 1000Genomes | |
| tmp_5_23022464_C_A | 40 | Q>H | No | 1000Genomes | |
| ENSVATH07436402 | 41 | F>I | No | 1000Genomes | |
| tmp_5_23022412_C_T | 58 | G>S | No | 1000Genomes | |
| tmp_5_23022402_T_G | 61 | Q>P | No | 1000Genomes | |
| tmp_5_23022396_G_T | 63 | P>Q | No | 1000Genomes | |
| ENSVATH12814747 | 77 | P>T | No | 1000Genomes | |
| ENSVATH07436401 | 83 | T>S | No | 1000Genomes | |
| ENSVATH07436400 | 87 | A>S | No | 1000Genomes | |
| ENSVATH12814745 | 99 | V>I | No | 1000Genomes | |
| ENSVATH00738181 | 100 | C>S | No | 1000Genomes | |
| ENSVATH07436399 | 111 | K>E | No | 1000Genomes | |
| ENSVATH07436398 | 113 | S>T | No | 1000Genomes | |
| ENSVATH07436395 | 119 | V>I | No | 1000Genomes | |
| ENSVATH07436394 | 134 | K>I | No | 1000Genomes | |
| tmp_5_23022105_G_C | 137 | Q>E | No | 1000Genomes | |
| tmp_5_23021926_G_C | 167 | N>K | No | 1000Genomes | |
| ENSVATH12814732 | 172 | S>F | No | 1000Genomes | |
| ENSVATH12814731 | 181 | S>F | No | 1000Genomes | |
| tmp_5_23021882_G_A | 182 | S>F | No | 1000Genomes | |
| tmp_5_23021706_A_T | 209 | Y>N | No | 1000Genomes | |
| ENSVATH07436392 | 212 | E>D | No | 1000Genomes | |
| ENSVATH07436391 | 220 | T>I | No | 1000Genomes | |
| tmp_5_23021633_T_A | 233 | N>I | No | 1000Genomes | |
| tmp_5_23021316_G_C | 249 | S>C | No | 1000Genomes | |
| tmp_5_23021310_A_T | 251 | M>K | No | 1000Genomes | |
| tmp_5_23021307_G_A | 252 | S>L | No | 1000Genomes | |
| tmp_5_23021286_T_C | 259 | K>R | No | 1000Genomes | |
| ENSVATH00738180 | 261 | P>S | No | 1000Genomes | |
| ENSVATH07436385 | 271 | Q>L | No | 1000Genomes | |
| tmp_5_23021220_G_C | 281 | P>R | No | 1000Genomes | |
| ENSVATH14636475 | 311 | K>Q | No | 1000Genomes | |
| tmp_5_23021130_T_C | 311 | K>R | No | 1000Genomes | |
| tmp_5_23021103_C_T | 320 | R>H | No | 1000Genomes | |
| ENSVATH07436383 | 333 | R>I | No | 1000Genomes | |
| tmp_5_23021063_T_G | 333 | R>S | No | 1000Genomes | |
| ENSVATH14636473 | 361 | E>G | No | 1000Genomes | |
| ENSVATH14636474 | 361 | E>K | No | 1000Genomes | |
| ENSVATH07436382 | 367 | S>G | No | 1000Genomes | |
| ENSVATH14636472 | 368 | I>K | No | 1000Genomes | |
| tmp_5_23020941_G_T | 374 | S>Y | No | 1000Genomes | |
| tmp_5_23020827_T_A | 382 | E>D | No | 1000Genomes | |
| ENSVATH14636471 | 391 | S>N | No | 1000Genomes | |
| tmp_5_23020785_T_A | 396 | L>F | No | 1000Genomes | |
| ENSVATH07436381 | 398 | V>A | No | 1000Genomes | |
| tmp_5_23020730_C_T | 415 | E>K | No | 1000Genomes | |
| ENSVATH00738179 | 445 | N>T | No | 1000Genomes | |
| tmp_5_23020416_C_T | 494 | A>T | No | 1000Genomes | |
| tmp_5_23020207_C_G | 534 | G>R | No | 1000Genomes | |
| ENSVATH00738177 | 541 | L>W | No | 1000Genomes | |
| tmp_5_23019847_C_A | 565 | R>M | No | 1000Genomes | |
| tmp_5_23019812_C_A | 577 | E>* | No | 1000Genomes | |
| tmp_5_23019811_T_A | 577 | E>V | No | 1000Genomes | |
| ENSVATH12814698 | 581 | L>R | No | 1000Genomes | |
| tmp_5_23019791_C_A | 584 | D>Y | No | 1000Genomes | |
| ENSVATH03441470 | 589 | F>Y | No | 1000Genomes |
No associated diseases with Q84WU9
4 regional properties for Q84WU9
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Zinc finger, CCCH-type | 303 - 331 | IPR000571-1 |
| domain | Zinc finger, CCCH-type | 335 - 363 | IPR000571-2 |
| domain | Cwf19-like protein, C-terminal domain-2 | 505 - 593 | IPR006767 |
| domain | Cwf19-like, C-terminal domain-1 | 372 - 490 | IPR006768 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| post-mRNA release spliceosomal complex | A spliceosomal complex that is formed following the release of the spliced product from the post-spliceosomal complex and contains the excised intron and three snRNPs, including U5. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| metal ion binding | Binding to a metal ion. |
| RNA lariat debranching enzyme activator activity | Increases the activity of an enzyme that catalyzes the hydrolysis of branched RNA structures that contain vicinal 2'-5'- and 3'-5'-phosphodiester bonds at a branch point nucleotide. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| mRNA splicing, via spliceosome | The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| O16216 | F17A9.2 | CWF19-like protein 1 homolog | Caenorhabditis elegans | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAPRILLCGD | PLGRLNQLFK | RVQSVSKSAG | PFDALICVGQ | FFPDSPEILD | EFLDYVEGRA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| QVPIPTYFTG | DYGVVAPKIL | STTSKKAENQ | GFKMDGLEVC | HNLFWLRGSG | KFSLHGLSVA |
| 130 | 140 | 150 | 160 | 170 | 180 |
| YLSGRQSSES | QFGKYSQDDV | DALRALAEEP | GGVDLFLTNE | WPAGVTNRAA | VSDIPVGISD |
| 190 | 200 | 210 | 220 | 230 | 240 |
| SSCSDSTVSE | LVMEVKPRYH | IAGSMGVFYA | REPYLNAEST | HVTRFIGLAQ | VGNKNKQKFL |
| 250 | 260 | 270 | 280 | 290 | 300 |
| HALSPTPTST | MSPAELSAKP | PKTTLWPYNL | QDGAAESKKR | PNDSDSDSQY | WRYDVPKRQK |
| 310 | 320 | 330 | 340 | 350 | 360 |
| SGSQGEKLCF | KFVCSGSCPR | GEDCHFQHNA | EAREQCRRGV | CLDLIIKGKC | EKGPECSYKH |
| 370 | 380 | 390 | 400 | 410 | 420 |
| EFQDESSIQR | KPRSENANRS | KECWFCLSSP | SVESHLIVSV | GESFYCALPK | GSLVEDHILI |
| 430 | 440 | 450 | 460 | 470 | 480 |
| IPIEHLPNTL | VLSPEVESEL | SRYQNGLRNC | YKSQGNDAVF | FELVSKRVSH | ANLQVVPVPS |
| 490 | 500 | 510 | 520 | 530 | 540 |
| SRARLLPNIF | SLAAEKLGFK | LVTKKFNDST | DGRKYLQKEY | NAALGLFYVE | LPDGTVLSHT |
| 550 | 560 | 570 | 580 | 590 | |
| LEENEVFPAQ | FGREVLAGLL | KIPDRADWRN | CKISQEEEAK | LAEDFKKQFQ | EFDPCQ |