Q84VG7
Gene name |
FES1 (At2g33835, T1B8) |
Protein name |
Protein FRIGIDA-ESSENTIAL 1 |
Names |
Zinc finger CCCH domain-containing protein 27, AtC3H27 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT2G33835 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q84VG7
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q84VG7-F1 | Predicted | AlphaFoldDB |
46 variants for Q84VG7
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_2_14314491_A_T | 26 | S>T | No | 1000Genomes | |
| tmp_2_14314473_G_A | 32 | P>S | No | 1000Genomes | |
| tmp_2_14314461_C_T | 36 | A>T | No | 1000Genomes | |
| tmp_2_14314093_C_T | 45 | R>K | No | 1000Genomes | |
| ENSVATH13521147 | 72 | P>S | No | 1000Genomes | |
| ENSVATH01945184 | 103 | K>N | No | 1000Genomes | |
| ENSVATH01945183 | 119 | L>I | No | 1000Genomes | |
| tmp_2_14313767_T_A | 126 | N>Y | No | 1000Genomes | |
| tmp_2_14313737_T_C | 136 | S>G | No | 1000Genomes | |
| tmp_2_14313722_C_T | 141 | G>S | No | 1000Genomes | |
| ENSVATH05651930 | 145 | S>T | No | 1000Genomes | |
| ENSVATH14582428 | 150 | R>I | No | 1000Genomes | |
| ENSVATH14582427 | 160 | V>L | No | 1000Genomes | |
| ENSVATH13521143 | 184 | R>S | No | 1000Genomes | |
| tmp_2_14313410_T_C | 199 | R>G | No | 1000Genomes | |
| ENSVATH14582426 | 207 | M>I | No | 1000Genomes | |
| tmp_2_14313376_A_G | 210 | M>T | No | 1000Genomes | |
| tmp_2_14313323_C_T | 228 | D>N | No | 1000Genomes | |
| ENSVATH05651928 | 248 | S>R | No | 1000Genomes | |
| tmp_2_14313244_C_T | 254 | R>K | No | 1000Genomes | |
| ENSVATH05651927 | 256 | S>P | No | 1000Genomes | |
| ENSVATH05651926 | 271 | A>G | No | 1000Genomes | |
| ENSVATH05651925 | 282 | M>K | No | 1000Genomes | |
| tmp_2_14313158_T_A | 283 | N>Y | No | 1000Genomes | |
| ENSVATH01945182 | 291 | D>H | No | 1000Genomes | |
| tmp_2_14313077_C_T | 310 | V>I | No | 1000Genomes | |
| tmp_2_14313056_C_A | 317 | G>C | No | 1000Genomes | |
| tmp_2_14313043_T_C | 321 | N>S | No | 1000Genomes | |
| tmp_2_14312938_G_C | 356 | A>G | No | 1000Genomes | |
| ENSVATH05651923 | 373 | N>S | No | 1000Genomes | |
| ENSVATH05651921 | 378 | S>T | No | 1000Genomes | |
| ENSVATH05651920 | 379 | K>E | No | 1000Genomes | |
| tmp_2_14312812_C_G | 398 | G>A | No | 1000Genomes | |
| tmp_2_14312701_A_C | 435 | V>G | No | 1000Genomes | |
| ENSVATH13521140 | 440 | V>I | No | 1000Genomes | |
| ENSVATH00259136 | 446 | A>T | No | 1000Genomes | |
| tmp_2_14312659_C_T | 449 | S>N | No | 1000Genomes | |
| ENSVATH05651917 | 489 | S>L | No | 1000Genomes | |
| ENSVATH05651918 | 489 | S>P | No | 1000Genomes | |
| tmp_2_14312500_A_G | 502 | M>T | No | 1000Genomes | |
| tmp_2_14312486_G_T | 507 | L>I | No | 1000Genomes | |
| ENSVATH00259135 | 507 | L>Q | No | 1000Genomes | |
| tmp_2_14312360_C_T | 549 | A>T | No | 1000Genomes | |
| ENSVATH05651914 | 550 | V>A | No | 1000Genomes | |
| ENSVATH01945181 | 555 | V>M | No | 1000Genomes | |
| ENSVATH05651912 | 582 | E>G | No | 1000Genomes |
No associated diseases with Q84VG7
1 regional properties for Q84VG7
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Zinc finger, CCCH-type | 96 - 123 | IPR000571 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| metal ion binding | Binding to a metal ion. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| cell differentiation | The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state. |
| flower development | The process whose specific outcome is the progression of the flower over time, from its formation to the mature structure. The flower is the reproductive structure in a plant, and its development begins with the transition of the vegetative or inflorescence meristem into a floral meristem. |
| positive regulation of vernalization response | Any process that activates or induces the rate of the vernalization response, by which induction of flowering is normally caused by extended exposure to cold temperatures. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSDSDMDIDD | DEVEQKVQVH | TIVRESELFD | KPPIQASNSH | NDVKRHSVTT | PLDEQSKIIK |
| 70 | 80 | 90 | 100 | 110 | 120 |
| EQAFAQDNGT | LPRFPAPGIP | PRSFFTGGGG | NEPEQKRAAL | PCKFFAKGWC | FNGVSCKFLH |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VKENSNCTSQ | QLAENSMAGN | GGIRSDLERR | ILDSREGVRV | SQLSENGVTS | LPTREDISFM |
| 190 | 200 | 210 | 220 | 230 | 240 |
| NPQRVFSSMS | FVNPPGSQRV | FPFNNEMRFM | PSFENIRRES | LKQTYGADFT | DNRSLVINNA |
| 250 | 260 | 270 | 280 | 290 | 300 |
| NSFALRSSFV | HEHRPSISSY | LKTDMGSAGP | AWTGSLSSSV | PMNDRASTVG | DFENGNSLSG |
| 310 | 320 | 330 | 340 | 350 | 360 |
| SGSLPTLQGV | AVSSDKGAEA | NTTSTKKKVS | SDDWEPSEPF | KASFTIPPYI | LPSSDALYDP |
| 370 | 380 | 390 | 400 | 410 | 420 |
| FTDIENLGDR | PLNDSLSSKG | EHARKSSCQQ | KDGDSASGPQ | ARDCKNDDKS | SSCSQNQHQE |
| 430 | 440 | 450 | 460 | 470 | 480 |
| TVARSLEAHG | VVEGVATSVV | DQNDTATPSK | EISSATAAEN | RVVLKRIKPA | GHDSWHRSDG |
| 490 | 500 | 510 | 520 | 530 | 540 |
| SSYKKTKKSD | EIDGEVRSDA | GMKVMRLFRT | AVVETIKEML | KPLWREGRLT | KDVHNMIVKK |
| 550 | 560 | 570 | 580 | ||
| AAEKVVGAAV | QFHQVPTDTE | SVDQYLGLSG | TRIVKLVEGY | VEKYGKP |