Q7Z794
Gene name |
KRT77 (KRT1B) |
Protein name |
Keratin, type II cytoskeletal 1b |
Names |
Cytokeratin-1B, CK-1B, Keratin-77, K77, Type-II keratin Kb39 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:374454 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q7Z794
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q7Z794-F1 | Predicted | AlphaFoldDB |
564 variants for Q7Z794
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA6587109 rs552221506 |
2 | S>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA384990501 rs552221506 |
2 | S>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA384990493 rs1208497914 |
3 | H>R | No |
ClinGen gnomAD |
|
|
CA237289349 rs949842506 |
4 | Q>E | No |
ClinGen TOPMed |
|
|
rs1592276488 CA384990486 |
4 | Q>R | No |
ClinGen Ensembl |
|
|
CA237289326 rs75899990 |
7 | S>Y | No |
ClinGen Ensembl |
|
|
CA384990459 rs1274404774 |
8 | Q>* | No |
ClinGen gnomAD |
|
|
CA6587106 VAR_056022 rs17118224 COSM1362581 |
10 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA6587105 rs767856418 |
10 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6587103 rs376998734 |
12 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs745505668 CA6587101 |
14 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA6587102 COSM940823 rs371763767 |
14 | M>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 15 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1394911813 CA384990408 |
15 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1319847419 CA384990404 |
16 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1319847419 CA384990403 |
16 | R>M | No |
ClinGen TOPMed gnomAD |
|
|
CA384990402 rs776190184 |
16 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA384990406 rs1314639767 |
16 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA6587098 rs559878053 |
17 | R>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs375217197 CA6587099 |
17 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs201637186 CA237289262 |
18 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA384990393 rs201637186 |
18 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
rs748012329 CA6587095 |
19 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA6587096 rs758226801 |
19 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs777785967 CA6587097 |
19 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA237289227 rs200719250 |
20 | S>I | No |
ClinGen gnomAD |
|
|
CA384990376 rs1208672282 |
21 | T>S | No |
ClinGen gnomAD |
|
|
rs1463886824 CA384990373 |
22 | S>G | No |
ClinGen gnomAD |
|
|
CA384990361 rs1270092909 |
23 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1270092909 CA384990363 |
23 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs778546882 CA6587094 |
25 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs1344377395 CA384990333 |
28 | G>D | No |
ClinGen gnomAD |
|
|
CA384990332 rs1344377395 |
28 | G>V | No |
ClinGen gnomAD |
|
|
CA6587092 rs754113687 |
29 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs754113687 CA6587093 |
29 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6587090 rs756278947 |
30 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA6587088 rs529887183 |
32 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6587089 rs139240914 |
32 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6587086 rs752005909 |
33 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA384990288 rs1413460373 |
36 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
CA384990287 rs1565656030 |
37 | V>M | No |
ClinGen Ensembl |
|
|
rs763236817 CA6587084 |
38 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA384990272 rs1565656019 |
39 | Y>D | No |
ClinGen Ensembl |
|
|
rs529823573 CA237289157 |
40 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs760206213 CA6587081 |
41 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772564369 CA6587080 |
41 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA237289142 rs1026733742 |
42 | G>E | No |
ClinGen TOPMed |
|
|
CA384990251 rs1409448595 |
43 | R>K | No |
ClinGen TOPMed |
|
|
CA6587077 rs189099278 |
45 | G>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs111504070 CA6587076 |
46 | G>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA237289122 rs149726101 |
48 | G>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs149726101 CA6587075 |
48 | G>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1302881202 CA384990214 |
49 | Y>C | No |
ClinGen TOPMed |
|
|
rs780448859 CA6587073 |
50 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA384990194 rs1225977595 |
52 | H>R | No |
ClinGen gnomAD |
|
|
rs1344046533 CA384990176 |
55 | G>R | No |
ClinGen TOPMed |
|
|
rs781111418 CA6587070 |
56 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs1592276352 CA384990169 |
56 | F>V | No |
ClinGen Ensembl |
|
| TCGA novel | 57 | G>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA384990140 rs1338213138 |
60 | S>I | No |
ClinGen gnomAD |
|
|
CA237289103 rs371905244 |
61 | L>I | No |
ClinGen ESP |
|
|
rs764602089 CA6587067 |
62 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA384990131 rs1592276342 |
62 | Y>H | No |
ClinGen Ensembl |
|
|
rs139606582 CA6587066 |
63 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA384990109 rs1422049738 |
65 | G>A | No |
ClinGen gnomAD |
|
|
CA384990108 rs1422049738 |
65 | G>V | No |
ClinGen gnomAD |
|
|
rs1565655965 CA384990107 |
66 | G>S | No |
ClinGen Ensembl |
|
|
rs1251512724 CA384990100 |
67 | S>G | No |
ClinGen gnomAD |
|
|
rs1270328211 CA384990090 |
68 | R>K | No |
ClinGen TOPMed |
|
|
CA384990082 rs1187642685 |
69 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA6587063 rs372099333 |
69 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA384990078 rs1489800117 |
70 | I>V | No |
ClinGen TOPMed |
|
|
CA6587062 rs772833269 |
72 | I>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 73 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6587061 rs771482193 |
73 | N>Y | No |
ClinGen ExAC |
|
|
CA6587058 rs768668326 |
75 | M>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA384990045 rs768668326 |
75 | M>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6587059 rs768668326 |
75 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA237289018 rs895772542 |
76 | G>R | No |
ClinGen TOPMed |
|
|
rs1416089070 CA384990036 |
77 | R>G | No |
ClinGen TOPMed |
|
|
CA6587057 rs749127239 |
78 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1227684689 CA384990017 |
79 | T>I | No |
ClinGen gnomAD |
|
|
CA384990015 rs1592276277 |
80 | S>G | No |
ClinGen Ensembl |
|
|
rs200889592 CA6587056 |
80 | S>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs553556926 CA6587055 |
81 | G>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs746065670 CA6587054 |
82 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA6587053 rs369487784 |
83 | C>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1356658838 CA384989993 |
83 | C>Y | No |
ClinGen gnomAD |
|
|
CA384989984 rs1405137418 |
84 | Q>H | No |
ClinGen gnomAD |
|
|
CA384989985 rs1364026560 |
84 | Q>R | No |
ClinGen TOPMed |
|
|
rs1412338576 CA384989980 |
85 | G>C | No |
ClinGen gnomAD |
|
|
rs1167711151 CA384989977 |
85 | G>D | No |
ClinGen gnomAD |
|
|
rs143791907 CA6587050 |
86 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs143791907 CA6587051 |
86 | G>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA384989969 rs1326830490 |
87 | G>E | No |
ClinGen gnomAD |
|
|
CA384989966 rs1411276999 |
88 | V>L | No |
ClinGen gnomAD |
|
|
rs1384383405 CA384989953 |
90 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1356902264 CA384989948 |
91 | F>I | No |
ClinGen TOPMed |
|
|
CA384989941 rs1233247160 |
91 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs765569339 CA6587047 |
92 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA237288995 rs1038468845 |
93 | G>R | No |
ClinGen Ensembl |
|
|
CA6587046 rs755858617 |
94 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs370354997 CA6587045 |
95 | R>I | No |
ClinGen ExAC gnomAD |
|
|
rs370354997 CA384989922 |
95 | R>T | No |
ClinGen ExAC gnomAD |
|
|
rs574319643 CA6587042 |
100 | G>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA6587041 rs773875276 |
101 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA237288960 rs889773976 |
102 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA384989879 rs1436270957 |
102 | T>N | No |
ClinGen gnomAD |
|
|
CA384989871 rs1328553960 |
103 | G>V | No |
ClinGen gnomAD |
|
|
CA6587038 rs537366207 |
104 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs762962674 CA6587039 |
104 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA384989869 rs762962674 |
104 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1409057673 CA384989864 |
105 | G>D | No |
ClinGen gnomAD |
|
|
rs745617008 CA6587036 |
105 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA237288923 rs934236236 |
106 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs78374723 CA6587035 |
109 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs771143626 CA6587034 |
109 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747095755 CA6587033 |
110 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1464338300 CA384989824 |
112 | F>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA384989809 rs1266165021 |
113 | G>E | No |
ClinGen gnomAD |
|
|
CA384989792 rs1279867353 |
115 | A>D | No |
ClinGen TOPMed |
|
|
rs777805186 CA6587031 |
115 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs934846785 CA237288870 |
116 | G>E | No |
ClinGen Ensembl |
|
|
rs758959331 CA6587030 |
119 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA384989707 rs1203238331 |
122 | F>V | No |
ClinGen TOPMed |
|
|
CA6587028 rs779329490 |
123 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA384989678 rs1306006563 |
124 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA6587026 rs754186437 |
125 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767111463 CA6587023 |
128 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs201334604 CA6587022 |
129 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs773619033 CA237288838 |
132 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1345828562 CA384989568 |
133 | P>L | No |
ClinGen gnomAD |
|
|
COSM1362579 CA384989553 rs1412927977 |
135 | G>S | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs377708946 CA237288826 |
135 | G>V | No |
ClinGen ESP TOPMed |
|
|
rs763052416 CA6587019 |
137 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs775579748 CA6587018 |
139 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1407450126 CA384989499 |
139 | V>L | No |
ClinGen TOPMed |
|
|
rs1241105983 CA384989482 |
140 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA6587017 rs765171295 |
141 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs759281421 CA6587016 |
142 | N>T | No |
ClinGen ExAC gnomAD |
|
|
CA237288766 rs776454439 |
144 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6587014 rs771104068 |
146 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs150486275 CA384989399 |
147 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs150486275 CA6587013 |
147 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA384989379 rs1329123658 |
148 | P>R | No |
ClinGen TOPMed |
|
|
CA237288726 rs992911535 |
149 | L>P | No |
ClinGen Ensembl |
|
|
CA237288702 rs267603526 |
152 | E>K | No |
ClinGen Ensembl |
|
|
CA384989314 rs1392520837 |
153 | V>A | No |
ClinGen gnomAD |
|
|
rs779421230 CA6587009 |
154 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1285006042 CA384989283 |
156 | E>K | No |
ClinGen TOPMed |
|
|
rs769170187 CA6587008 |
159 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6587007 rs749658124 |
160 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs369566176 CA6587006 |
162 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1302273521 CA384989180 |
163 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA384989157 rs1471448868 |
165 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs199766670 CA6587005 |
165 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA384989135 rs1381254506 |
167 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
CA384989111 rs1202002320 |
168 | I>M | No |
ClinGen TOPMed |
|
|
CA384989096 rs1565655720 |
169 | M>I | No |
ClinGen Ensembl |
|
|
rs1193437280 CA384989105 |
169 | M>L | No |
ClinGen gnomAD |
|
|
rs1026255386 CA237288659 |
170 | V>I | No |
ClinGen Ensembl |
|
|
CA384989081 rs751254422 |
171 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA6587004 rs751254422 |
171 | L>I | No |
ClinGen ExAC gnomAD |
|
|
CA237288653 rs993302980 |
173 | N>K | No |
ClinGen TOPMed |
|
|
rs777502387 CA6587003 |
173 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA384989032 rs1480367051 |
174 | K>N | No |
ClinGen TOPMed |
|
|
rs758003409 CA6587002 |
174 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs752214869 CA6587001 |
176 | A>P | No |
ClinGen ExAC |
|
|
CA6587000 rs765126131 |
178 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA6586999 rs376278892 |
179 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA384988960 rs1426502423 |
180 | D>G | No |
ClinGen TOPMed |
|
|
CA384988948 rs1428989288 |
181 | K>M | No |
ClinGen gnomAD |
|
|
rs762004603 CA6586976 |
182 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA6586975 rs774353164 |
183 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs668313 CA6586974 |
183 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6586973 rs762876592 |
184 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1447171869 CA384988445 |
186 | E>G | No |
ClinGen TOPMed |
|
|
CA6586972 rs770383634 |
187 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6586971 rs770383634 |
187 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752544092 CA237283991 |
187 | Q>P | No |
ClinGen gnomAD |
|
|
TCGA novel rs746274657 CA384988411 |
188 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen ExAC gnomAD |
| TCGA novel | 191 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1374464383 CA384988365 |
192 | L>R | No |
ClinGen TOPMed |
|
|
CA6586969 rs777112218 |
193 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs897184620 CA237283975 |
194 | T>S | No |
ClinGen Ensembl |
|
|
rs747793089 CA6586967 |
195 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA6586966 rs141700319 |
196 | W>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs754527132 CA6586965 |
197 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs764922509 CA6586964 |
200 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA384988259 rs1311644500 |
201 | Q>* | No |
ClinGen TOPMed |
|
|
CA6586963 rs780074643 |
201 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA384988246 rs1432948731 |
202 | V>M | No |
ClinGen gnomAD |
|
|
rs756018848 CA6586962 |
203 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750271966 CA6586961 |
204 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA384988204 rs1253244746 COSM162063 |
205 | S>L | NS [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs1167863672 CA384988196 |
206 | T>A | No |
ClinGen gnomAD |
|
|
rs201227660 CA6586959 |
206 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs75308431 CA6586958 |
208 | T>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs368763533 CA237283899 |
211 | L>M | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA384988136 rs368763533 |
211 | L>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA6586956 rs763122983 |
213 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA384988109 rs1413489679 |
213 | P>T | No |
ClinGen gnomAD |
|
|
rs775399168 CA6586955 |
214 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA384988055 rs1173359494 |
217 | N>K | No |
ClinGen TOPMed |
|
|
CA6586954 rs529944681 |
217 | N>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1341471838 CA384988049 |
218 | Y>C | No |
ClinGen gnomAD |
|
|
CA384988027 rs760106782 |
219 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA384988029 rs1565653847 |
219 | I>N | No |
ClinGen Ensembl |
|
|
rs1567759 CA6586951 |
220 | G>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6586952 rs1567759 |
220 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs934306289 CA237283874 |
221 | D>E | No |
ClinGen Ensembl |
|
|
rs200157774 CA384987985 |
223 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6586949 rs200157774 |
223 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs201677209 CA6586950 |
223 | R>W | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA384987951 rs1328520929 |
226 | V>G | No |
ClinGen gnomAD |
|
|
rs867128100 CA237283806 |
227 | D>N | No |
ClinGen Ensembl |
|
|
CA384987899 rs1416526302 |
230 | S>N | No |
ClinGen gnomAD |
|
|
rs756106631 CA384987884 |
231 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756106631 CA6586946 |
231 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756106631 CA6586945 |
231 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs559934133 CA6586943 |
232 | E>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA6586940 rs140276094 |
235 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA384987827 rs1439314555 |
235 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA6586939 rs764414327 |
237 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs377759755 CA6586937 |
238 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377759755 CA6586936 |
238 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs759619786 CA6586935 |
238 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA384987758 rs1337373280 |
240 | V>D | No |
ClinGen TOPMed |
|
|
CA6586933 rs766941173 |
240 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1277388681 CA384987755 |
241 | R>G | No |
ClinGen gnomAD |
|
|
rs1356602940 CA384987747 |
242 | S>G | No |
ClinGen gnomAD |
|
|
CA237283751 rs868383654 |
242 | S>N | No |
ClinGen gnomAD |
|
|
rs1461331229 CA384987742 |
242 | S>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs773421127 CA6586931 |
244 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA384987730 rs1167275959 |
244 | Q>P | No |
ClinGen gnomAD |
|
|
rs768407678 CA6586930 |
245 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs762504365 CA6586929 |
246 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA237283709 COSM361684 CA6586927 rs142147928 |
247 | V>L | lung [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA384987691 rs1592273829 |
248 | E>K | No |
ClinGen Ensembl |
|
|
rs1233190259 CA384987667 |
249 | D>G | No |
ClinGen gnomAD |
|
|
CA384987648 rs1467030683 |
250 | Y>* | No |
ClinGen gnomAD |
|
|
CA6586925 rs745326092 |
251 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA384987637 rs1477889737 |
251 | K>R | No |
ClinGen TOPMed |
|
|
CA6586924 rs781132843 |
252 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA384987620 rs1327835642 |
252 | S>R | No |
ClinGen gnomAD |
|
|
CA384987619 rs1281745443 |
253 | K>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA384987248 rs1565653375 |
255 | E>K | No |
ClinGen Ensembl |
|
|
CA384987231 rs566088726 |
257 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA6586898 rs566088726 |
257 | E>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs141346656 CA6586897 |
258 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA384987197 rs7138818 |
261 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA237282565 rs754643160 |
262 | T>I | No |
ClinGen Ensembl |
|
|
CA6586895 rs112917375 |
264 | S>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6586893 CA384987180 rs757585360 |
264 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA384987179 rs1396609727 |
265 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1240034974 CA384987168 |
266 | N>S | No |
ClinGen TOPMed |
|
|
rs751882972 CA6586892 |
269 | V>A | No |
ClinGen ExAC |
|
|
CA6586889 rs776190000 |
270 | V>D | No |
ClinGen ExAC gnomAD |
|
|
CA6586890 rs200230736 |
270 | V>F | No |
ClinGen ESP ExAC gnomAD |
|
|
rs200230736 CA237282506 |
270 | V>I | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 271 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6586887 rs760169871 |
272 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1256413704 CA384987123 |
273 | K>R | No |
ClinGen gnomAD |
|
|
CA237281916 rs370700001 |
275 | V>M | No |
ClinGen Ensembl |
|
|
rs768580339 CA237281908 |
276 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768580339 CA6586865 |
276 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749033968 CA6586864 |
277 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1462378424 CA384987058 |
278 | A>T | No |
ClinGen gnomAD |
|
|
rs80219032 CA237281903 |
279 | Y>F | No |
ClinGen Ensembl |
|
|
rs1393097127 CA384987028 |
280 | V>L | No |
ClinGen gnomAD |
|
| TCGA novel | 284 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 284 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs775597551 CA6586863 |
285 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs564744341 CA6586862 |
289 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1010273405 CA237281875 |
290 | D>N | No |
ClinGen TOPMed |
|
|
CA237281872 rs891916240 |
291 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA237281870 rs202182451 |
291 | T>I | No |
ClinGen Ensembl |
|
|
rs139809869 CA6586861 |
292 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1461175766 CA384986859 |
293 | T>A | No |
ClinGen TOPMed |
|
|
rs1240594398 CA384986836 |
295 | E>* | No |
ClinGen TOPMed |
|
|
CA6586856 rs747518466 |
297 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs147453297 CA237281839 |
297 | N>S | No |
ClinGen ESP TOPMed |
|
|
CA6586854 rs758781145 |
301 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA6586853 rs62639689 |
302 | L>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed |
|
|
rs1308788675 CA384986699 |
303 | F>V | No |
ClinGen gnomAD |
|
| rs372310102 | 305 | T>= | Variant assessed as Somatic; 0.0001386 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6586850 rs551108191 |
305 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1345704107 CA384985606 |
306 | E>K | No |
ClinGen gnomAD |
|
|
CA384985530 rs1362344641 |
310 | V>L | No |
ClinGen Ensembl |
|
|
CA384985499 rs1298459578 |
312 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA384985483 rs1375223266 |
313 | H>R | No |
ClinGen gnomAD |
|
|
rs1413729572 CA384985493 |
313 | H>Y | No |
ClinGen gnomAD |
|
|
CA384985447 rs1337649286 |
315 | S>G | No |
ClinGen TOPMed |
|
|
rs533060920 CA6586823 |
316 | D>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
COSM1705677 rs201797687 CA6586824 |
316 | D>N | skin [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs765083307 CA384985394 |
317 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6586821 rs759191456 |
317 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs765083307 CA6586822 |
317 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6586819 rs771101670 |
318 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA6586817 rs773252027 |
319 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6586818 rs375236986 |
319 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
CA6586815 rs585664 |
322 | S>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA237276907 rs1039194258 |
322 | S>P | No |
ClinGen gnomAD |
|
|
rs141924269 CA6586814 |
323 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA237276884 rs75198741 |
324 | D>E | No |
ClinGen Ensembl |
|
|
rs769079875 CA6586813 |
324 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781027224 CA6586811 |
326 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs756943078 CA6586810 |
327 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756943078 CA384985197 |
327 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6586809 rs201946142 |
327 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6586808 rs777410966 |
328 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1328798533 CA384985182 |
328 | S>P | No |
ClinGen gnomAD |
|
|
CA384985098 rs1471454758 |
334 | I>N | No |
ClinGen TOPMed |
|
|
rs765032011 CA6586805 |
336 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA384985064 rs10783528 |
336 | D>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs10783528 CA6586806 |
336 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA384985037 rs1183779409 |
337 | A>E | No |
ClinGen gnomAD |
|
|
CA6586804 rs754829666 |
337 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753599284 CA6586803 |
338 | V>E | No |
ClinGen ExAC gnomAD |
|
|
rs146379141 CA384985013 |
339 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs77359838 CA6586801 |
339 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs146379141 COSM1171915 CA6586802 |
339 | R>W | oesophagus [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs61729645 CA6586800 |
341 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1171942117 CA384984937 |
342 | Y>C | No |
ClinGen gnomAD |
|
|
CA6586799 rs767640724 |
342 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761742165 CA6586798 |
345 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1212572949 CA384984877 |
345 | I>T | No |
ClinGen gnomAD |
|
|
CA6586797 rs79761664 |
348 | R>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 349 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA384984780 rs1284293975 |
350 | K>N | No |
ClinGen TOPMed |
|
|
rs1452804461 CA384984771 |
351 | D>N | No |
ClinGen Ensembl |
|
|
CA6586796 rs769008819 |
352 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs145209085 CA6586794 |
354 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA384984716 rs145209085 |
354 | E>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA384984658 rs1332596583 |
357 | Y>N | No |
ClinGen gnomAD |
|
|
CA384984261 rs1221395095 |
362 | Q>* | No |
ClinGen TOPMed |
|
|
CA384984260 rs368633150 |
362 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
rs368633150 CA237276072 |
362 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1189930620 CA384984253 |
363 | E>G | No |
ClinGen TOPMed |
|
|
rs1485242619 CA384984256 |
363 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1485242619 CA384984255 |
363 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs138421134 CA6586775 |
365 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA384984212 rs1218282171 |
366 | I>N | No |
ClinGen gnomAD |
|
|
rs3782489 CA6586774 |
367 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1210616244 CA384984185 |
368 | A>E | No |
ClinGen gnomAD |
|
|
CA237276063 rs962967012 |
368 | A>S | No |
ClinGen Ensembl |
|
|
CA6586771 rs771588732 |
370 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA6586770 rs747742433 |
371 | H>P | No |
ClinGen ExAC gnomAD |
|
|
CA6586767 rs749230231 |
374 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA384984104 rs768704146 |
374 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs768704146 CA6586768 |
374 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6586765 rs779910178 |
378 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs781520591 CA6586762 |
380 | M>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs755926806 CA6586764 |
380 | M>L | No |
ClinGen ExAC |
|
|
CA6586763 rs750178389 |
380 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1416701658 CA384983919 |
382 | I>F | No |
ClinGen gnomAD |
|
|
CA384983918 rs1195405886 |
382 | I>T | No |
ClinGen gnomAD |
|
|
CA6586759 rs370988767 |
387 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6586758 rs763066575 |
387 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6586760 rs370988767 |
387 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs753275869 CA6586757 |
388 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA384983815 rs1210675064 |
388 | T>P | No |
ClinGen gnomAD |
|
|
rs1307005005 CA384983786 |
389 | V>A | No |
ClinGen gnomAD |
|
|
rs200529529 CA6586755 |
389 | V>I | Variant assessed as Somatic; 4.635e-05 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA384983696 rs1341416042 |
394 | A>G | No |
ClinGen gnomAD |
|
|
CA6586754 rs776837417 |
394 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1412737024 CA384983681 CA384983679 |
395 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1381010377 CA384983658 |
397 | S>N | No |
ClinGen gnomAD |
|
|
rs771815735 CA237276017 |
398 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs1352688674 CA384983624 |
399 | V>G | No |
ClinGen gnomAD |
|
|
CA6586752 rs761365874 |
399 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs559206625 CA6586751 |
401 | K>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1465666626 CA384983598 |
401 | K>R | No |
ClinGen gnomAD |
|
|
rs1199888608 CA384983545 |
402 | Q>H | No |
ClinGen TOPMed |
|
|
CA6586728 rs745790482 |
407 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs1252382142 CA384983358 |
407 | Q>H | No |
ClinGen gnomAD |
|
|
rs745790482 CA6586729 |
407 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs1257709600 CA384983341 |
409 | L>H | No |
ClinGen TOPMed |
|
|
rs1565652070 CA384983324 |
410 | I>M | No |
ClinGen Ensembl |
|
|
CA6586726 rs201690097 |
411 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA384983296 rs778177726 |
412 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1182747693 CA384983285 |
413 | A>V | No |
ClinGen TOPMed |
|
|
rs369985813 CA6586721 |
414 | E>G | No |
ClinGen ESP ExAC gnomAD |
|
|
rs748296038 CA6586722 |
414 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA384983246 rs1369616480 |
416 | R>K | No |
ClinGen gnomAD |
|
|
rs754313640 CA6586719 |
417 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs750768524 CA384983212 |
418 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA6586718 rs756468097 |
418 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756468097 CA6586717 |
418 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
TCGA novel CA384983197 rs1190297738 |
419 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen gnomAD |
|
CA237275903 rs78726811 |
420 | A>S | No |
ClinGen Ensembl |
|
|
CA237275909 rs78726811 |
420 | A>T | No |
ClinGen Ensembl |
|
|
CA6586715 COSM4150194 rs763785281 |
420 | A>V | ovary [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs762584638 CA6586714 |
423 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs775052126 CA6586713 |
424 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs376686743 CA237275882 |
425 | W>* | No |
ClinGen ESP gnomAD |
|
|
CA6586710 rs776461470 |
427 | K>* | No |
ClinGen ExAC gnomAD |
|
|
CA6586711 rs776461470 |
427 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1565652025 CA384983088 |
427 | K>N | No |
ClinGen Ensembl |
|
| TCGA novel | 428 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs770867707 CA6586709 |
428 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA237275863 rs111826357 |
429 | Q>H | No |
ClinGen Ensembl |
|
|
rs772489280 CA6586708 |
429 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772489280 CA6586707 |
429 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772489280 CA6586706 |
429 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs796663900 CA237275862 |
430 | D>E | No |
ClinGen Ensembl |
|
|
rs1487192216 CA384983055 |
430 | D>V | No |
ClinGen gnomAD |
|
|
rs150981240 CA6586704 |
431 | L>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs200694410 CA237275856 |
431 | L>R | No |
ClinGen TOPMed |
|
|
CA384983024 rs1592271453 |
432 | E>* | No |
ClinGen Ensembl |
|
|
rs779218101 CA6586693 |
434 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1331132248 CA384982979 |
436 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA384982976 rs1294426131 |
437 | Q>* | No |
ClinGen gnomAD |
|
|
rs369567819 CA6586691 |
437 | Q>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1362060465 CA384982960 |
439 | K>M | No |
ClinGen gnomAD |
|
|
CA384982957 rs1300499624 |
440 | E>K | No |
ClinGen gnomAD |
|
|
rs780465817 CA6586690 |
442 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1402173914 CA384982935 |
443 | A>S | No |
ClinGen gnomAD |
|
|
CA6586689 rs756622914 |
443 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs199965086 CA384982932 |
444 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6586685 rs752363574 |
444 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199965086 CA6586686 |
444 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs776180693 CA6586682 |
447 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760656188 CA6586680 |
447 | R>H | Variant assessed as Somatic; 0.0001387 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs760656188 CA384982903 |
447 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760656188 CA6586681 |
447 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1276443996 CA384982900 |
448 | D>N | No |
ClinGen gnomAD |
|
|
CA6586679 rs773215814 |
449 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA6586677 rs147856424 |
450 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA384982835 rs1216243526 |
452 | M>I | No |
ClinGen gnomAD |
|
|
rs144586198 CA237275777 |
454 | G>A | No |
ClinGen ESP TOPMed gnomAD |
|
| TCGA novel | 454 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6586675 rs768894015 |
455 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1592271398 CA384982803 |
455 | V>G | No |
ClinGen Ensembl |
|
|
CA6586676 rs768894015 |
455 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1307786282 CA384982767 |
458 | S>F | No |
ClinGen TOPMed |
|
|
CA6586674 rs546897928 |
460 | D>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA6586673 rs780169885 |
462 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA384982701 rs1403527299 |
463 | I>T | No |
ClinGen gnomAD |
|
|
CA237275755 rs903879117 |
464 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs903879117 CA237275762 |
464 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs746383788 CA6586671 |
465 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA6586670 rs771133711 |
467 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757643596 CA6586669 |
467 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA384982565 rs1442990864 |
470 | L>Q | No |
ClinGen gnomAD |
|
|
rs1196247653 CA384982521 |
472 | G>V | No |
ClinGen gnomAD |
|
|
rs1258335117 CA384982434 |
476 | R>K | No |
ClinGen gnomAD |
|
|
CA6586648 rs758621677 |
477 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA384982287 rs1238524513 |
477 | M>T | No |
ClinGen gnomAD |
|
|
CA384982296 rs1354921852 |
477 | M>V | No |
ClinGen TOPMed |
|
|
rs779523115 CA6586646 |
483 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA384982149 rs1405759308 |
484 | H>N | No |
ClinGen TOPMed gnomAD |
|
|
CA237275560 rs200605894 |
486 | S>N | No |
ClinGen gnomAD |
|
|
rs368000634 CA6586621 |
489 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6586620 rs368000634 |
489 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA384981904 rs1464619211 |
490 | Q>H | No |
ClinGen gnomAD |
|
|
rs1176217096 CA384981924 |
490 | Q>K | No |
ClinGen gnomAD |
|
|
rs759748041 CA6586618 |
491 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA6586617 rs776764870 |
491 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1479012947 CA384981877 |
492 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA6586616 rs766459602 |
494 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1005688607 CA237275349 |
495 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
rs760694810 CA6586615 |
495 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs773799791 CA6586614 |
496 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA384981792 rs772426229 |
497 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1172567455 CA384981796 |
497 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs748596912 CA384981784 |
498 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1317332944 CA384981777 |
498 | G>D | No |
ClinGen gnomAD |
|
|
rs748596912 CA6586612 |
498 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6586609 rs745521566 |
499 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1307865391 CA384981757 |
499 | G>D | No |
ClinGen gnomAD |
|
|
rs745521566 CA6586610 |
499 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780937243 CA6586608 |
500 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1375073491 CA384981711 |
501 | G>A | No |
ClinGen TOPMed |
|
| TCGA novel | 503 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs777810337 CA6586605 |
504 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 505 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA384981601 rs1389085212 |
507 | G>D | No |
ClinGen TOPMed |
|
|
rs778681418 CA6586603 |
507 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6586602 rs778681418 |
507 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199796258 CA6586600 |
508 | S>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA384981570 rs1422406510 |
510 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA6586599 rs766546122 |
511 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1457380166 CA384981530 |
512 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs750447369 CA384981508 |
513 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6586597 rs750447369 |
513 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768129431 CA6586596 |
514 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768129431 CA237275286 |
514 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1265050376 CA384981454 |
515 | S>N | No |
ClinGen gnomAD |
|
|
CA384981429 rs762222509 |
517 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6586593 rs762222509 |
517 | G>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA384981407 rs1239247863 |
518 | G>D | No |
ClinGen gnomAD |
|
|
CA384981402 rs1239247863 |
518 | G>V | No |
ClinGen gnomAD |
|
|
rs1389618750 CA384981343 |
522 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1565651450 CA384981349 |
522 | G>R | No |
ClinGen Ensembl |
|
|
rs1565651442 CA384981331 |
523 | R>K | No |
ClinGen Ensembl |
|
|
CA6586589 rs201634299 |
524 | S>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201634299 CA237275254 |
524 | S>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1363601898 CA384981304 |
526 | R>H | No |
ClinGen TOPMed |
|
|
CA6586585 rs777139871 |
527 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs746583825 CA6586586 |
527 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA384981296 rs1312686345 |
528 | G>S | No |
ClinGen gnomAD |
|
|
CA384981293 rs1180631904 |
528 | G>V | No |
ClinGen gnomAD |
|
|
rs1419706938 CA384981291 |
529 | G>R | No |
ClinGen gnomAD |
|
|
CA384981280 rs1208224480 |
530 | A>V | No |
ClinGen gnomAD |
|
|
CA237275243 rs748046252 |
531 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748046252 CA6586583 |
531 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6586582 rs200729891 |
532 | G>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6586579 rs636127 |
533 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs543787765 CA6586578 |
533 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs636127 CA384981271 |
533 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1351488194 CA384981259 |
534 | S>R | No |
ClinGen gnomAD |
|
|
rs750583026 CA6586575 |
535 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1334140084 CA384981254 |
535 | G>V | No |
ClinGen TOPMed |
|
|
CA384981253 rs1474754885 |
536 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA384981247 rs1486288029 |
537 | G>S | No |
ClinGen TOPMed |
|
|
CA6586573 rs761896752 |
537 | G>V | No |
ClinGen ExAC |
|
|
rs1329955770 CA384981232 |
539 | G>C | No |
ClinGen gnomAD |
|
|
rs764658932 CA384981222 CA6586571 |
540 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA384981219 rs1195688250 |
541 | G>C | No |
ClinGen gnomAD |
|
|
rs763455099 CA6586570 |
541 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775978302 CA6586569 |
542 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs760244596 CA384981207 |
543 | G>C | No |
ClinGen ExAC gnomAD |
|
|
rs760244596 CA6586567 |
543 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs1196836113 CA384981200 |
544 | G>D | No |
ClinGen gnomAD |
|
|
CA6586565 rs574919551 COSM4147228 |
545 | G>C | thyroid [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
rs778860938 CA384981183 |
547 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs778860938 CA6586563 |
547 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs1346480372 CA384981180 |
548 | S>G | No |
ClinGen TOPMed |
|
|
CA237275187 rs972918498 |
548 | S>N | No |
ClinGen TOPMed |
|
|
CA6586562 rs768558461 |
550 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768558461 CA384981163 |
550 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1205588657 CA384981165 |
550 | G>R | No |
ClinGen gnomAD |
|
|
rs1358328798 CA384981156 |
551 | G>E | No |
ClinGen TOPMed |
|
|
CA6586560 rs779820538 |
552 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1293722471 CA384981142 |
554 | R>G | No |
ClinGen TOPMed |
|
|
rs1277135272 CA384981131 |
555 | S>N | No |
ClinGen gnomAD |
|
|
rs1399803466 CA384981127 |
556 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA237275177 rs78247417 |
556 | G>V | No |
ClinGen Ensembl |
|
|
CA384981120 rs1320852577 |
557 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA384981116 rs558199424 |
558 | G>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs558199424 CA6586558 |
558 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA384981112 rs1309183443 |
558 | G>V | No |
ClinGen TOPMed |
|
|
rs781428400 CA6586557 |
559 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA384981099 rs139323266 |
561 | R>C | No |
ClinGen ESP ExAC gnomAD |
|
|
CA384981096 rs1430285556 |
561 | R>L | No |
ClinGen gnomAD |
|
|
CA6586556 rs139323266 |
561 | R>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs751663426 CA6586555 |
562 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs751663426 CA384981095 |
562 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs758965022 CA6586553 |
563 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs764750752 CA6586554 |
563 | Q>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 564 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA237275145 rs538740870 |
565 | I>S | No |
ClinGen 1000Genomes |
|
|
CA384981077 rs1592270670 |
565 | I>V | No |
ClinGen Ensembl |
|
|
CA384981065 rs1481512460 |
566 | Q>H | No |
ClinGen Ensembl |
|
|
CA6586552 rs753183959 |
567 | T>N | No |
ClinGen ExAC |
|
|
rs765531457 CA6586551 |
569 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA6586549 rs772769052 |
571 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA384981039 rs1592270654 |
571 | T>P | No |
ClinGen Ensembl |
|
|
CA6586548 rs767166293 |
573 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761361009 CA6586547 |
575 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1319548818 CA384980171 |
575 | R>W | No |
ClinGen gnomAD |
|
|
CA237275127 rs1005707702 |
578 | E>* | No |
ClinGen Ensembl |
|
|
CA6586546 rs773837165 |
579 | E>Y | No |
ClinGen ExAC TOPMed gnomAD |
No associated diseases with Q7Z794
5 GO annotations of cellular component
| Name | Definition |
|---|---|
| cornified envelope | A type of plasma membrane that has been modified through addition of distinct intracellular and extracellular components, including ceramide, found in cornifying epithelial cells (corneocytes). |
| cytoskeleton | A cellular structure that forms the internal framework of eukaryotic and prokaryotic cells. The cytoskeleton includes intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| extracellular exosome | A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
| keratin filament | A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| structural constituent of skin epidermis | The action of a molecule that contributes to the structural integrity of an epidermal cutaneous structure. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| intermediate filament organization | Control of the spatial distribution of intermediate filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking. |
| keratinization | The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q14CN4 | KRT72 | Keratin, type II cytoskeletal 72 | Homo sapiens (Human) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSHQFSSQSA | FSSMSRRVYS | TSSSAGSGGG | SPAVGSVCYA | RGRCGGGGYG | IHGRGFGSRS |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LYNLGGSRSI | SINLMGRSTS | GFCQGGGVGG | FGGGRGFGVG | STGAGGFGGG | GFGGAGFGTS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| NFGLGGFGPY | CPPGGIQEVT | INQSLLEPLH | LEVDPEIQRI | KTQEREQIMV | LNNKFASFID |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KVRFLEQQNQ | VLQTKWELLQ | QVNTSTGTNN | LEPLLENYIG | DLRRQVDLLS | AEQMRQNAEV |
| 250 | 260 | 270 | 280 | 290 | 300 |
| RSMQDVVEDY | KSKYEDEINK | RTGSENDFVV | LKKDVDAAYV | SKVDLESRVD | TLTGEVNFLK |
| 310 | 320 | 330 | 340 | 350 | 360 |
| YLFLTELSQV | QTHISDTNVI | LSMDNNRSLD | LDSIIDAVRT | QYELIAQRSK | DEAEALYQTK |
| 370 | 380 | 390 | 400 | 410 | 420 |
| YQELQITAGR | HGDDLKNSKM | EIAELNRTVQ | RLQAEISNVK | KQIEQMQSLI | SDAEERGEQA |
| 430 | 440 | 450 | 460 | 470 | 480 |
| LQDAWQKLQD | LEEALQQSKE | ELARLLRDYQ | AMLGVKLSLD | VEIATYRQLL | EGEESRMSGE |
| 490 | 500 | 510 | 520 | 530 | 540 |
| LQSHVSISVQ | NSQVSVNGGA | GGGGSYGSGG | YGGGSGGGYG | GGRSYRGGGA | RGRSGGGYGS |
| 550 | 560 | 570 | |||
| GCGGGGGSYG | GSGRSGRGSS | RVQIIQTSTN | TSHRRILE |