Q7XDB8
Gene name |
LOGL10 (Os10g0479500, LOC_Os10g33900, OsJ_31908, OSJNBa0055P24.10) |
Protein name |
Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 |
Names |
Protein LONELY GUY-like 10 |
Species |
Oryza sativa subsp japonica (Rice) |
KEGG Pathway |
osa:4348914 |
EC number |
3.2.2.n1: Hydrolyzing N-glycosyl compounds |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q7XDB8
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q7XDB8-F1 | Predicted | AlphaFoldDB |
No variants for Q7XDB8
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q7XDB8 | |||||
No associated diseases with Q7XDB8
5 regional properties for Q7XDB8
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain | 139 - 283 | IPR011538 |
| domain | 4Fe-4S ferredoxin-type, iron-sulphur binding domain | 369 - 436 | IPR017896 |
| conserved_site | 4Fe-4S ferredoxin, iron-sulphur binding, conserved site | 416 - 427 | IPR017900 |
| domain | Soluble ligand binding domain | 296 - 344 | IPR019554 |
| domain | RnfC Barrel sandwich hybrid domain | 14 - 115 | IPR026902 |
Functions
| Description | ||
|---|---|---|
| EC Number | 3.2.2.n1 | Hydrolyzing N-glycosyl compounds |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| hydrolase activity, hydrolyzing N-glycosyl compounds | Catalysis of the hydrolysis of any N-glycosyl bond. |
| N6-(Delta2-isopentenyl)-adenosine 5'-monophosphate phosphoribohydrolase activity | Catalysis of the reaction: N(6)-(dimethylallyl)adenosine 5'-phosphate + H2O <=> N(6)-dimethylallyladenine + D-ribofuranose 5-phosphate. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| cytokinin biosynthetic process | The chemical reactions and pathways resulting in the formation of cytokinins, a class of adenine-derived compounds that can function in plants as growth regulators. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q8RUN2 | LOG1 | Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MRQSRFKRIC | VFCGSSQGKK | RSYHDAAIEL | GNELVARSID | LVYGGGSIGL | MGLVSQAVFD |
| 70 | 80 | 90 | 100 | 110 | 120 |
| GGRHVIGVIP | KTLMTPEISG | ETVGEVRPVA | DMHQRKAEMA | RQSDAFIALP | GGYGTLEELL |
| 130 | 140 | 150 | 160 | 170 | 180 |
| EVITWAQLGI | HHKPVGLLNV | DGYYNSLLTF | IDKAVEEGFI | NTSARRIIVM | APTAEELMDK |
| 190 | 200 | ||||
| LEEYVPYHDR | VASKLNWEMG | HLGY |