Q7VGB9

PR
Gene name
rpoA
Protein name
DNA-directed RNA polymerase subunit alpha
Names
RNAP subunit alpha, RNA polymerase subunit alpha, Transcriptase subunit alpha
Species
Helicobacter hepaticus (strain ATCC 51449 / 3B1)
KEGG Pathway
hhe:HH_1403
EC number
2.7.7.6: Nucleotidyltransferases
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

205-278 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q7VGB9

Entry ID Method Resolution Chain Position Source
AF-Q7VGB9-F1 Predicted AlphaFoldDB

No variants for Q7VGB9

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q7VGB9

No associated diseases with Q7VGB9

3 regional properties for Q7VGB9

Type Name Position InterPro Accession
domain RNA polymerase, alpha subunit, C-terminal 243 - 307 IPR011260
domain DNA-directed RNA polymerase, insert domain 64 - 156 IPR011262
domain DNA-directed RNA polymerase, RpoA/D/Rpb3-type 23 - 230 IPR011263

Functions

Description
EC Number 2.7.7.6 Nucleotidyltransferases
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

2 GO annotations of cellular component

Name Definition
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
DNA-directed RNA polymerase complex A protein complex that possesses DNA-directed RNA polymerase activity.

3 GO annotations of molecular function

Name Definition
DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
DNA-directed 5'-3' RNA polymerase activity Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.
protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.

1 GO annotations of biological process

Name Definition
DNA-templated transcription The synthesis of an RNA transcript from a DNA template.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MNMIKIEPYI PTDISIEEIS TNRIRISAYP FESGYAITLA HPIRRLLLSS SVGYAPTALR
70 80 90 100 110 120
IQGVTHEFDS IRGIVEDVSH FITNLKNIRF LIKDTESDNV QLHYEFKGPM VLSANELVND
130 140 150 160 170 180
MVGIVNPEAY LATINENASL SFSLIVQKGI GYVPSESIRG KISEDYIPLD AYFTPVKKAV
190 200 210 220 230 240
YEIENVLVED NPNYEKIVFD IETDGQIEPI TAFKEAIAIM HKQMSIFGVD LSTASSGTRN
250 260 270 280 290 300
ISEDSGELKT LMIKIDTLNL SARCFNCLDR SGLKYVGELV IMSENELKNI KNMGKKSYDE
310 320 330
IADKLEELGY PVGGEIADDI LPLLNRKLAK LKSN