Q753Y2
Gene name |
RIM101 (AFR190C) |
Protein name |
pH-response transcription factor pacC/RIM101 |
Names |
|
Species |
Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (Yeast) (Eremothecium gossypii) |
KEGG Pathway |
ago:AGOS_AFR190C |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q753Y2
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q753Y2-F1 | Predicted | AlphaFoldDB |
No variants for Q753Y2
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q753Y2 | |||||
No associated diseases with Q753Y2
3 regional properties for Q753Y2
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Zinc finger C2H2-type | 70 - 100 | IPR013087-1 |
| domain | Zinc finger C2H2-type | 106 - 135 | IPR013087-2 |
| domain | Zinc finger C2H2-type | 136 - 163 | IPR013087-3 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| DNA-binding transcription repressor activity, RNA polymerase II-specific | A DNA-binding transcription factor activity that represses or decreases the transcription of specific gene sets transcribed by RNA polymerase II. |
| metal ion binding | Binding to a metal ion. |
6 GO annotations of biological process
| Name | Definition |
|---|---|
| ascospore formation | The process in which cells that are products of meiosis acquire the specialized features of ascospores. Ascospores are generally found in clusters of four or eight spores within a single mother cell, the ascus, and are characteristic of the ascomycete fungi (phylum Ascomycota). |
| cellular response to alkaline pH | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus with pH > 7. pH is a measure of the acidity or basicity of an aqueous solution. |
| cellular response to anoxia | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating a decline in oxygen levels to trace amounts, <0.1%. |
| fungal-type cell wall biogenesis | A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a fungal-type cell wall. The fungal-type cell wall contains beta-glucan and may contain chitin. |
| positive regulation of division septum assembly | Any process that increases the frequency, rate or extent of division septum formation. division septum formation is the assembly and arrangement of a septum that spans the plasma membrane interface between progeny cells following cytokinesis. |
| positive regulation of transcription by RNA polymerase II | Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSHINHLLNS | DEAIPSTALR | SCAQRSPMSS | DDELVGTAGY | RENQPVPGST | LPTSPSDVST |
| 70 | 80 | 90 | 100 | 110 | 120 |
| DTENDEHQRL | LCQWDACGSE | FSQPELLYHH | LCQDHVGRKS | QRNLQLNCHW | GSCTTKTVKR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| DHITSHLRVH | VPLKPFSCST | CSRKFKRPQD | LKKHLKVHME | DTMKERSRAA | PGSRGVRKTG |
| 190 | 200 | 210 | 220 | 230 | 240 |
| VNKGSALQEK | ARTLPNLTVE | SFVSQEMQNY | YPYYKSRQHL | DETLSHIILP | PPAALGGTLA |
| 250 | 260 | 270 | 280 | 290 | 300 |
| SEPPSYTRKA | VSFFTTLSQD | MSRRLPSLAP | CNSPGPAGKM | VMLPRPEQQY | ARVPRYPAMP |
| 310 | 320 | 330 | 340 | 350 | 360 |
| ELPPLVTSPG | AESHALPRGH | NFRPAPLIPG | SMLPSLSRFS | HDKSQFVARN | SYSLNQKASL |
| 370 | 380 | 390 | 400 | 410 | 420 |
| NEELCENELD | IALENLALDD | TDALRAELQT | VNIIKDYLTC | LLLEDVYTES | FELPASVEKS |
| 430 | |||||
| HSTLRKYPQI | KV |