Q6R3K8
PR
Gene name |
YSL4 (At5g41000, MEE6.7) |
Protein name |
Probable metal-nicotianamine transporter YSL4 |
Names |
Protein YELLOW STRIPE LIKE 4, AtYSL4 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT5G41000 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q6R3K8
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q6R3K8-F1 | Predicted | AlphaFoldDB |
64 variants for Q6R3K8
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH07286213 | 6 | P>L | No | 1000Genomes | |
| tmp_5_16420932_C_T | 8 | S>L | No | 1000Genomes | |
| ENSVATH03307323 | 18 | P>T | No | 1000Genomes | |
| ENSVATH03307325 | 19 | E>Q | No | 1000Genomes | |
| tmp_5_16420974_T_C | 22 | L>P | No | 1000Genomes | |
| ENSVATH03307326 | 25 | G>D | No | 1000Genomes | |
| ENSVATH03307327 | 27 | Y>D | No | 1000Genomes | |
| ENSVATH00692471 | 28 | V>I | No | 1000Genomes | |
| ENSVATH07286217 | 80 | K>N | No | 1000Genomes | |
| ENSVATH07286219 | 91 | F>V | No | 1000Genomes | |
| ENSVATH12307650 | 93 | S>C | No | 1000Genomes | |
| ENSVATH07286229 | 126 | A>G | No | 1000Genomes | |
| ENSVATH12307730 | 137 | S>C | No | 1000Genomes | |
| ENSVATH12307732 | 177 | M>T | No | 1000Genomes | |
| ENSVATH07286231 | 181 | Y>S | No | 1000Genomes | |
| ENSVATH03307348 | 209 | K>N | No | 1000Genomes | |
| ENSVATH07286234 | 226 | C>F | No | 1000Genomes | |
| tmp_5_16422009_T_C | 227 | F>L | No | 1000Genomes | |
| tmp_5_16422025_G_A | 232 | S>N | No | 1000Genomes | |
| tmp_5_16422031_T_C | 234 | I>T | No | 1000Genomes | |
| ENSVATH03307349 | 236 | G>D | No | 1000Genomes | |
| tmp_5_16422262_G_A | 278 | V>I | No | 1000Genomes | |
| ENSVATH00692484 | 292 | F>Y | No | 1000Genomes | |
| ENSVATH00692485 | 304 | D>N | No | 1000Genomes | |
| ENSVATH07286236 | 312 | G>D | No | 1000Genomes | |
| ENSVATH12307797 | 332 | N>S | No | 1000Genomes | |
| tmp_5_16422546_A_C | 335 | K>T | No | 1000Genomes | |
| tmp_5_16422569_G_A | 343 | E>K | No | 1000Genomes | |
| ENSVATH00692487 | 354 | L>R | No | 1000Genomes | |
| tmp_5_16422621_T_A | 360 | I>N | No | 1000Genomes | |
| ENSVATH07286241 | 363 | K>I | No | 1000Genomes | |
| ENSVATH14559355 | 368 | V>I | No | 1000Genomes | |
| ENSVATH00692489 | 369 | L>F | No | 1000Genomes | |
| ENSVATH07286242 | 371 | R>Q | No | 1000Genomes | |
| ENSVATH07286243 | 375 | K>I | No | 1000Genomes | |
| ENSVATH14559356 | 380 | F>Y | No | 1000Genomes | |
| ENSVATH07286244 | 391 | V>A | No | 1000Genomes | |
| ENSVATH07286245 | 393 | G>S | No | 1000Genomes | |
| ENSVATH00692493 | 403 | A>S | No | 1000Genomes | |
| ENSVATH00692493 | 403 | A>T | No | 1000Genomes | |
| tmp_5_16422948_T_G | 422 | L>V | No | 1000Genomes | |
| tmp_5_16422954_G_T | 424 | A>S | No | 1000Genomes | |
| ENSVATH14559357 | 459 | G>E | No | 1000Genomes | |
| tmp_5_16423090_C_T | 469 | A>V | No | 1000Genomes | |
| ENSVATH12307804 | 471 | C>Y | No | 1000Genomes | |
| tmp_5_16423200_C_A | 506 | L>I | No | 1000Genomes | |
| ENSVATH00692497 | 516 | A>T | No | 1000Genomes | |
| ENSVATH07286250 | 519 | T>R | No | 1000Genomes | |
| tmp_5_16423350_G_A | 556 | A>T | No | 1000Genomes | |
| ENSVATH07286252 | 561 | H>Y | No | 1000Genomes | |
| ENSVATH07286253 | 569 | F>S | No | 1000Genomes | |
| ENSVATH00692499 | 572 | A>S | No | 1000Genomes | |
| tmp_5_16423401_G_T | 573 | A>S | No | 1000Genomes | |
| ENSVATH12307858 | 576 | V>I | No | 1000Genomes | |
| tmp_5_16423504_T_C | 607 | F>S | No | 1000Genomes | |
| ENSVATH12307859 | 608 | A>T | No | 1000Genomes | |
| tmp_5_16423558_A_G | 625 | N>S | No | 1000Genomes | |
| tmp_5_16423564_A_G | 627 | K>R | No | 1000Genomes | |
| ENSVATH14559360 | 629 | A>T | No | 1000Genomes | |
| ENSVATH07286256 | 633 | S>L | No | 1000Genomes | |
| tmp_5_16423672_T_G | 663 | I>S | No | 1000Genomes | |
| ENSVATH03307374 | 668 | R>* | No | 1000Genomes | |
| ENSVATH08542050 | 669 | P>L | No | 1000Genomes | |
| tmp_5_16423697_G_C | 671 | S>Y | No | 1000Genomes |
No associated diseases with Q6R3K8
No regional properties for Q6R3K8
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q6R3K8 | |||
5 GO annotations of cellular component
| Name | Definition |
|---|---|
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| plant-type vacuole | A closed structure that is completely surrounded by a unit membrane, contains liquid, and retains the same shape regardless of cell cycle phase. An example of this structure is found in Arabidopsis thaliana. |
| plant-type vacuole membrane | The lipid bilayer surrounding a vacuole that retains the same shape regardless of cell cycle phase. The membrane separates its contents from the cytoplasm of the cell. An example of this component is found in Arabidopsis thaliana. |
| vacuolar membrane | The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| oligopeptide transmembrane transporter activity | Enables the transfer of oligopeptides from one side of a membrane to the other. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| iron ion transmembrane transport | A process in which an iron ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. |
10 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P53134 | YGL114W | Putative oligopeptide transporter YGL114W | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | PR |
| Q9AY27 | YS1 | Iron-phytosiderophore transporter yellow stripe 1 | Zea mays (Maize) | PR |
| Q6ZGM7 | YSL7 | Probable metal-nicotianamine transporter YSL7 | Oryza sativa subsp japonica (Rice) | PR |
| Q0E4J6 | YSL8 | Probable metal-nicotianamine transporter YSL8 | Oryza sativa subsp japonica (Rice) | PR |
| Q6H3Z6 | YSL2 | Metal-nicotianamine transporter YSL2 | Oryza sativa subsp japonica (Rice) | PR |
| Q5JQD7 | YSL12 | Probable metal-nicotianamine transporter YSL12 | Oryza sativa subsp japonica (Rice) | PR |
| Q0J932 | YSL10 | Probable metal-nicotianamine transporter YSL10 | Oryza sativa subsp japonica (Rice) | PR |
| Q7XRV2 | YSL6 | Probable metal-nicotianamine transporter YSL6 | Oryza sativa subsp japonica (Rice) | PR |
| Q6R3K6 | YSL6 | Probable metal-nicotianamine transporter YSL6 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9SHY2 | YSL7 | Probable metal-nicotianamine transporter YSL7 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| METEIPRSTE | ISETLLLPET | NLDHGEYVPE | WKEQITIRGL | ISSALLGILF | CIITHKLNLT |
| 70 | 80 | 90 | 100 | 110 | 120 |
| IGIIPSLNVA | AGLLGFFFIK | SWTGFLSKLG | FLSKPFTKQE | NTVIQTCVVS | CYGLAYSGGF |
| 130 | 140 | 150 | 160 | 170 | 180 |
| GSYLIAMDER | TYKLIGSDYP | GNNPEDVINP | GLWWMTGFLF | VVSFLGLFCL | VPLRKVMILD |
| 190 | 200 | 210 | 220 | 230 | 240 |
| YKLTYPSGTA | TAMLINSFHN | NTGAELAGKQ | VKCLGKYLSL | SLVWSCFKWF | FSGIGGACGF |
| 250 | 260 | 270 | 280 | 290 | 300 |
| DHFPTLGLTL | FKNTFYFDFS | PTFIGCGMIC | PHLVNCSVLL | GAIISWGFLW | PFISQHAGDW |
| 310 | 320 | 330 | 340 | 350 | 360 |
| YPADLKANDF | KGLYGYKVFI | AISIILGDGL | YNLIKIIVVT | VKEICNKSSR | QHNLPVFTDI |
| 370 | 380 | 390 | 400 | 410 | 420 |
| LDKSKTSVLM | REKKKRDIIF | LKDRIPLEFA | VSGYVGLAAI | STAIIPLIFP | PLKWYFVLCS |
| 430 | 440 | 450 | 460 | 470 | 480 |
| YLVAPGLAFC | NSYGAGLTDM | SMPSTYGKTG | LFIVASIVGN | NGGVIAGLAA | CGIMMSIVST |
| 490 | 500 | 510 | 520 | 530 | 540 |
| AADLMQDFKT | GYLTLSSAKS | MFVTQLLGTA | MGCIIAPLTF | WLFWTAFDIG | DPDGLYKAPY |
| 550 | 560 | 570 | 580 | 590 | 600 |
| AVIYREMAIL | GVEGFAKLPK | HCLALCCGFF | IAALIVNLIR | DMTPPKISKL | IPLPMAMAGP |
| 610 | 620 | 630 | 640 | 650 | 660 |
| FYIGAYFAID | MFVGTVIMLV | WERMNKKDAD | DYSGAVASGL | ICGDGIWTIP | SAILSILRIN |
| PPICMYFRPS |