Q5ZHS3

PR
Gene name
C1D (RCJMB04_33m12)
Protein name
Nuclear nucleic acid-binding protein C1D
Names
Species
Gallus gallus (Chicken)
KEGG Pathway
gga:421267
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

56-142 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q5ZHS3

Entry ID Method Resolution Chain Position Source
AF-Q5ZHS3-F1 Predicted AlphaFoldDB

No variants for Q5ZHS3

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q5ZHS3

No associated diseases with Q5ZHS3

No regional properties for Q5ZHS3

Type Name Position InterPro Accession
No domain, repeats, and functional sites for Q5ZHS3

Functions

Description
EC Number
Subcellular Localization
  • Nucleus
  • Cytoplasm
  • Nucleus, nucleolus
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

3 GO annotations of cellular component

Name Definition
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
exosome (RNase complex) A ribonuclease complex that has 3-prime to 5-prime exoribonuclease activity and possibly endoribonuclease activity, producing 5-prime-phosphomonoesters. Participates in a multitude of cellular RNA processing and degradation events preventing nuclear export and/or translation of aberrant RNAs. Restricted to processing linear and circular single-stranded RNAs (ssRNA) only. RNAs with complex secondary structures may have to be unwound or pre-processed by co-factors prior to entering the complex, esp if the 3-prime end is structured.
nucleolus A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.

2 GO annotations of molecular function

Name Definition
DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
RNA binding Binding to an RNA molecule or a portion thereof.

2 GO annotations of biological process

Name Definition
maturation of 5.8S rRNA Any process involved in the maturation of a precursor 5.8S ribosomal RNA (rRNA) molecule into a mature 5.8S rRNA molecule.
regulation of gene expression Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA).

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MAEDINAEEY PTEIHDYLTT FEKSLTSVDE MLKTMMSVSR SELLQKLEPL EQAKLDLVSA
70 80 90 100 110 120
YTLNSMFWVY LATQGINPKE HPVKQELERI RTYMNKVKEI ADKKKASKLD KGAASRFVRN
130 140
ALWEPNPENG QTPAKAKKRK MN