Q5K651
Gene name |
SAMD9 (C7orf5, DRIF1, KIAA2004, OEF1) |
Protein name |
Sterile alpha motif domain-containing protein 9 |
Names |
SAM domain-containing protein 9 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:54809 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
2 structures for Q5K651
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 7KSP | X-ray | 280 A | A/B | 156-385 | PDB |
| AF-Q5K651-F1 | Predicted | AlphaFoldDB |
1245 variants for Q5K651
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs201122403 RCV000669155 |
1 | M>T | Normophosphatemic familial tumoral calcinosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1482171921 CA368206273 RCV001266766 |
30 | Q>* | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs1085307093 RCV000490527 |
32 | H>missing | Normophosphatemic familial tumoral calcinosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1554337424 RCV000672720 |
45 | V>missing | Normophosphatemic familial tumoral calcinosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001301857 RCV002539487 rs770339001 CA4343169 |
106 | R>C | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000490326 CA4343140 rs767558735 RCV003126606 |
154 | Q>* | Normophosphatemic familial tumoral calcinosis [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs543007243 RCV001863066 RCV001194464 CA4343038 |
344 | R>* | Normophosphatemic familial tumoral calcinosis [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
COSM1452881 RCV001260988 CA4343028 rs138478808 RCV001363225 |
353 | T>M | MIRAGE syndrome large_intestine [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001728083 rs1470207548 CA368201693 |
391 | G>* | Normophosphatemic familial tumoral calcinosis [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs1791602240 RCV001330968 |
437 | F>C | MIRAGE syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1584254152 VAR_077885 RCV000239546 CA368197084 RCV001386011 |
459 | R>Q | MIRAGE syndrome MIRAGE; decreased cell proliferation; changed endosome organization [ClinVar, UniProt] | Yes |
ClinGen ClinVar Ensembl dbSNP UniProt |
|
RCV001816674 rs375515095 RCV000902173 RCV000670510 |
600 | E>missing | Normophosphatemic familial tumoral calcinosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001818646 RCV000888571 rs767270627 RCV001775153 |
627 | S>missing | MIRAGE syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1791587535 RCV001266437 |
658 | N>D | Inborn genetic diseases [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001270306 VAR_085147 rs1791586314 |
676 | K>E | Monosomy 7 myelodysplasia and leukemia syndrome 2 M7MLS2 [ClinVar, UniProt] | Yes |
ClinVar dbSNP UniProt |
|
CA4342898 COSM1093113 RCV001347711 RCV002291750 rs763070754 |
685 | R>* | MIRAGE syndrome Variant assessed as Somatic; 0.0 impact. endometrium [ClinVar, NCI-TCGA, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA16618572 rs1064795431 RCV000479048 RCV002525885 |
685 | R>Q | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs753146043 RCV002532982 RCV000714858 |
720 | N>missing | MIRAGE syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs778749748 RCV000784939 CA4342876 RCV000784940 |
733 | I>T | MIRAGE syndrome Normophosphatemic familial tumoral calcinosis [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA368191926 rs1584253388 RCV000984532 |
749 | H>Q | MIRAGE syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1584253343 CA368191536 RCV000239465 VAR_077886 |
769 | D>N | MIRAGE syndrome MIRAGE; decreased cell proliferation; changed endosome organization [ClinVar, UniProt] | Yes |
ClinGen ClinVar Ensembl dbSNP UniProt |
|
rs147587391 RCV001820016 RCV001325704 RCV002546138 CA4342846 |
792 | V>I | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
| VAR_077887 | 834 | N>Y | MIRAGE; decreased cell proliferation; changed endosome organization [UniProt] | Yes | UniProt |
|
rs1554337029 RCV000674376 |
837 | R>missing | Normophosphatemic familial tumoral calcinosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001330969 rs1791570014 |
932 | T>I | MIRAGE syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
VAR_077888 CA368189249 rs1554336981 RCV001281104 RCV000624410 |
974 | E>K | MIRAGE syndrome Variant assessed as Somatic; impact. Inborn genetic diseases MIRAGE; decreased cell proliferation; changed endosome organization [ClinVar, NCI-TCGA, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl NCI-TCGA dbSNP |
|
rs1247438528 RCV001281105 RCV002537685 CA368189193 RCV001266142 |
982 | R>C | MIRAGE syndrome Variant assessed as Somatic; 0.0 impact. Inborn genetic diseases [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000677708 rs1554336974 CA368189192 RCV001662742 |
982 | R>H | MIRAGE syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV002489336 RCV001819013 rs146087534 RCV000958358 CA4342763 |
1003 | N>S | Normophosphatemic familial tumoral calcinosis [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA4342708 RCV000668331 RCV001816671 RCV000784942 rs572380130 |
1127 | Y>* | Normophosphatemic familial tumoral calcinosis [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
RCV001270305 rs759775100 TCGA novel |
1136 | E>Q | Monosomy 7 myelodysplasia and leukemia syndrome 2 Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinVar NCI-TCGA dbSNP |
|
rs1554336918 CA368184636 RCV000673236 |
1169 | Q>* | Normophosphatemic familial tumoral calcinosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
| VAR_077889 | 1195 | A>V | MIRAGE; decreased cell proliferation; changed endosome organization [UniProt] | Yes | UniProt |
|
RCV000962215 RCV002499172 rs199887936 RCV000670395 RCV001816673 |
1218 | D>* | Normophosphatemic familial tumoral calcinosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001330970 RCV002546430 rs778111446 |
1243 | N>missing | MIRAGE syndrome [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_077890 | 1280 | P>L | MIRAGE; decreased cell proliferation; changed endosome organization [UniProt] | Yes | UniProt |
| VAR_077891 | 1286 | Q>K | MIRAGE; decreased cell proliferation; changed endosome organization [UniProt] | Yes | UniProt |
|
rs1791543423 RCV001281106 |
1293 | R>Q | MIRAGE syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1584251938 CA368182017 RCV000239516 VAR_077813 RCV002508782 |
1293 | R>W | MIRAGE syndrome MIRAGE; decreased cell proliferation; changed endosome organization [ClinVar, UniProt] | Yes |
ClinGen ClinVar Ensembl dbSNP UniProt |
|
RCV000670841 RCV002531265 rs755666547 |
1445 | Q>missing | Normophosphatemic familial tumoral calcinosis [ClinVar] | Yes |
ClinVar dbSNP |
|
CA4342557 RCV000909633 rs755857667 RCV002540795 RCV001818820 |
1466 | G>R | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs121918554 VAR_031529 RCV000001288 CA114859 |
1495 | K>E | Normophosphatemic familial tumoral calcinosis NFTC; loss of cytoplasmic expression [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV001861784 RCV001816672 RCV000669924 CA4342536 rs200178876 |
1520 | E>* | Normophosphatemic familial tumoral calcinosis [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000841380 rs149966534 RCV000623988 RCV001821756 CA4342530 |
1529 | R>H | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA368176636 RCV000623183 rs1554336742 |
1555 | P>S | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
| TCGA novel | 1 | M>? | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368206660 rs1562776669 |
2 | A>S | No |
ClinGen Ensembl |
|
|
CA4343237 rs781032261 |
5 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754638665 CA4343236 |
6 | N>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368206594 rs1188228102 |
7 | L>F | No |
ClinGen Ensembl |
|
|
CA368206568 rs1410126828 |
9 | E>A | No |
ClinGen TOPMed |
|
| TCGA novel | 9 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779810375 CA368206543 |
11 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs779810375 CA4343234 |
11 | T>K | No |
ClinGen ExAC gnomAD |
|
|
rs1334987881 CA368206537 |
12 | D>H | No |
ClinGen gnomAD |
|
|
CA368206501 rs1397658256 |
14 | W>L | No |
ClinGen gnomAD |
|
|
rs757777689 CA4343230 |
15 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368206490 rs757777689 |
15 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA161995512 rs757777689 |
15 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765663084 CA4343231 |
15 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1432345908 CA368206464 |
17 | E>G | No |
ClinGen gnomAD |
|
|
CA161995472 rs775165048 |
19 | V>E | No |
ClinGen Ensembl |
|
|
CA368206441 rs1158948048 |
19 | V>I | No |
ClinGen gnomAD |
|
|
CA4343229 rs754213471 |
22 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA4343227 rs760925659 |
24 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA4343226 rs775712957 |
25 | S>I | No |
ClinGen ExAC gnomAD |
|
|
CA368206355 rs775712957 |
25 | S>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA4343225 rs148110610 |
26 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs759617299 CA368206316 |
27 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368206310 rs143734187 |
28 | I>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed |
|
CA4343221 rs748098989 |
28 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA4343222 rs776674692 |
28 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs143734187 CA4343223 |
28 | I>V | No |
ClinGen ESP ExAC TOPMed |
|
|
rs758063917 CA161995415 |
29 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1216221231 CA368206289 |
29 | D>V | No |
ClinGen gnomAD |
|
|
rs534555102 CA4343220 |
30 | Q>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
RCV000964290 rs746748986 CA4343217 |
32 | H>L | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA4343216 rs148617088 |
33 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4343215 rs758054589 |
36 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA161995369 rs921706319 |
37 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
RCV001312467 rs921706319 CA368206093 |
37 | T>S | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
rs745435231 CA368206065 |
39 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745435231 CA4343214 |
39 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771019191 CA368206046 |
40 | D>E | No |
ClinGen gnomAD |
|
|
CA161995351 rs375408867 |
41 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4343213 rs375408867 |
41 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1478829221 CA368206009 |
43 | G>E | No |
ClinGen gnomAD |
|
|
rs1192596060 CA368205995 |
45 | V>I | No |
ClinGen gnomAD |
|
|
CA4343211 rs754337797 |
46 | L>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 47 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368205935 rs1292313496 |
48 | W>C | No |
ClinGen gnomAD |
|
|
rs764461512 CA4343210 |
50 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA4343209 rs756486898 |
51 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA4343207 rs752993312 |
52 | E>* | No |
ClinGen ExAC |
|
| TCGA novel | 52 | E>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| rs768867610 | 52 | E>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1212423698 CA368205864 |
53 | H>L | No |
ClinGen TOPMed |
|
|
CA368205869 rs1231432215 |
53 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA161995287 rs1006785467 |
55 | V>I | No |
ClinGen Ensembl |
|
|
CA161995274 rs778463566 |
56 | D>G | No |
ClinGen TOPMed |
|
|
rs1198713880 CA368205834 |
56 | D>Y | No |
ClinGen TOPMed |
|
|
rs372097723 CA4343202 COSM4149412 |
57 | M>T | ovary [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA4343203 rs201880188 |
57 | M>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4343199 rs776649684 |
60 | T>K | No |
ClinGen ExAC |
|
|
rs1033469000 CA161995251 |
60 | T>S | No |
ClinGen Ensembl |
|
|
rs375212899 CA4343197 |
62 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4343196 rs775417911 |
64 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs530019742 CA4343195 |
65 | I>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA368205763 rs1464078029 |
66 | Q>H | No |
ClinGen TOPMed |
|
|
CA368205756 rs1391494456 |
67 | I>M | No |
ClinGen TOPMed |
|
|
rs745512561 CA4343194 |
67 | I>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745512561 CA368205758 |
67 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368205755 rs1248670605 |
68 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA4343192 rs550190460 |
70 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4343187 rs200748623 |
75 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4343188 rs111780648 |
75 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA161995140 rs74650267 |
77 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA4343185 rs753119804 |
77 | T>I | No |
ClinGen ExAC |
|
|
rs753119804 CA368205692 |
77 | T>K | No |
ClinGen ExAC |
|
|
CA161995139 rs74650267 |
77 | T>P | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 78 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1336926502 CA368205684 |
79 | I>L | No |
ClinGen gnomAD |
|
|
CA368205680 rs1276227207 |
79 | I>T | No |
ClinGen gnomAD |
|
|
CA368205673 rs1233454034 |
80 | E>G | No |
ClinGen gnomAD |
|
|
CA4343184 rs781518706 |
81 | D>V | No |
ClinGen ExAC gnomAD |
|
|
COSM1452887 rs755238026 CA4343183 |
82 | S>L | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs772605331 CA161995107 |
83 | I>T | No |
ClinGen Ensembl |
|
|
rs1562776424 CA368205643 |
85 | T>A | No |
ClinGen Ensembl |
|
|
CA4343180 rs183163060 |
85 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA161995106 rs183163060 |
85 | T>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs147157740 RCV001819052 CA4343179 RCV000963453 |
86 | S>F | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs573516601 CA368205622 |
88 | M>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4343178 rs573516601 |
88 | M>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA161995100 rs1043918112 |
89 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1453963233 CA368205609 |
90 | K>R | No |
ClinGen gnomAD |
|
|
rs1342149733 CA368205596 |
92 | S>I | No |
ClinGen TOPMed gnomAD |
|
|
CA4343177 rs760675282 |
95 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4343176 rs775475003 |
97 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs771959603 CA4343175 |
99 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
rs559163594 CA4343174 |
101 | V>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs559163594 CA368205533 |
101 | V>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA368205535 CA368205534 rs1203790711 |
101 | V>L | No |
ClinGen gnomAD |
|
|
CA161995036 rs201390140 |
102 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
rs770425514 CA4343172 |
103 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA4343171 rs748895679 |
104 | K>* | No |
ClinGen ExAC gnomAD |
|
|
CA4343168 rs201453488 |
106 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs770339001 CA4343170 |
106 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4343166 rs755395110 |
108 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs751810299 CA4343165 |
109 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4343163 rs758540335 |
110 | S>* | No |
ClinGen ExAC gnomAD |
|
|
RCV001302295 CA368205468 rs1373862862 |
112 | Q>E | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
CA368205466 rs750585395 |
112 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750585395 CA4343162 |
112 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1266128638 CA368205457 |
113 | K>N | No |
ClinGen TOPMed |
|
|
rs199704187 CA161994961 |
113 | K>R | No |
ClinGen 1000Genomes |
|
| TCGA novel | 115 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4343161 rs765384658 |
115 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs763877299 CA161994947 |
116 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4343159 rs370262863 |
116 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs763877299 CA4343160 |
116 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1468474186 CA368205418 |
119 | N>S | No |
ClinGen gnomAD |
|
|
rs146592813 CA4343158 |
120 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 121 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs774013999 CA4343156 |
122 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA161994910 rs1051007612 |
123 | A>S | No |
ClinGen TOPMed |
|
|
CA161994914 rs1051007612 |
123 | A>T | No |
ClinGen TOPMed |
|
|
CA161994909 rs189893807 |
124 | N>K | No |
ClinGen 1000Genomes gnomAD |
|
|
CA4343154 rs144391563 COSM247172 |
125 | P>L | skin prostate [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA4343155 rs770675430 |
125 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368205370 rs1222431206 |
127 | A>P | No |
ClinGen gnomAD |
|
|
CA368205359 rs143535915 CA4343152 |
128 | M>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 130 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs757780367 CA4343149 |
135 | S>* | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 140 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4343148 rs6969691 VAR_031526 |
143 | I>T | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1454462576 CA368205224 |
143 | I>V | No |
ClinGen gnomAD |
|
|
CA4343147 rs747471054 |
147 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA4343144 rs746054958 |
148 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780265493 CA4343146 |
148 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1262050840 CA368205134 |
149 | Y>D | No |
ClinGen gnomAD |
|
| TCGA novel | 151 | K>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368205086 rs1221319744 |
152 | E>G | No |
ClinGen gnomAD |
|
|
rs368510205 CA4343142 |
153 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4343141 rs753904283 |
153 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368205041 rs1485952790 |
155 | P>L | No |
ClinGen gnomAD |
|
|
rs751420980 CA4343138 |
157 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754859629 CA4343139 |
157 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA4343137 rs766059671 |
160 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs762771385 CA4343136 |
163 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1482501377 CA368204939 |
164 | Y>H | No |
ClinGen TOPMed |
|
|
rs764815844 CA4343134 |
165 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs772878640 CA4343135 |
165 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA4343133 rs761313894 |
166 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA4343132 rs776111249 |
169 | F>I | No |
ClinGen ExAC gnomAD |
|
|
CA368204863 rs1396477629 |
169 | F>Y | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 170 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs747447641 CA4343130 |
170 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA368204839 rs1415588352 |
170 | S>R | No |
ClinGen gnomAD |
|
|
COSM1452885 CA4343127 rs373775990 |
174 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA4343128 rs373775990 |
174 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4343126 COSM453576 rs779289964 |
174 | R>H | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA4343129 rs373775990 |
174 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1184456364 CA368204782 |
175 | Y>H | No |
ClinGen gnomAD |
|
|
rs749437618 CA4343124 |
176 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1296067892 CA368204763 |
176 | K>M | No |
ClinGen gnomAD |
|
|
CA368204742 rs1213460857 |
177 | L>F | No |
ClinGen gnomAD |
|
|
rs370116435 CA161994700 |
177 | L>S | No |
ClinGen ESP |
|
|
rs534496289 CA4343122 |
180 | S>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA368204702 rs1584255048 |
180 | S>I | No |
ClinGen Ensembl |
|
|
CA368204701 rs1562776229 |
180 | S>R | No |
ClinGen Ensembl |
|
|
CA161994682 rs919537887 |
182 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
rs767702290 CA161994672 |
183 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA4343121 rs751486645 |
183 | P>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 183 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs767702290 CA368204672 |
183 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1293677260 CA368204661 |
184 | E>* | No |
ClinGen gnomAD |
|
|
CA368204643 rs1371421226 |
185 | T>R | No |
ClinGen TOPMed |
|
|
rs758207444 CA4343119 |
186 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA4343120 rs377222750 |
186 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs750155626 CA4343118 |
188 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA161994648 rs1014088211 |
189 | N>D | No |
ClinGen TOPMed |
|
|
CA368204619 rs1439913327 |
189 | N>S | No |
ClinGen gnomAD |
|
|
rs372825129 CA4343117 |
190 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368204602 rs1462029800 COSM1550878 |
192 | D>H | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA368204603 rs1462029800 |
192 | D>N | No |
ClinGen gnomAD |
|
|
rs151163886 CA4343116 |
193 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA161994627 rs548924777 |
194 | I>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4343112 rs371337736 |
194 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4343113 rs548924777 |
194 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs967807530 CA161994615 |
200 | F>L | No |
ClinGen gnomAD |
|
|
rs760045627 CA4343110 |
201 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA161994594 rs760045627 |
201 | T>K | No |
ClinGen ExAC gnomAD |
|
|
CA4343108 rs774843282 |
202 | N>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 203 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1584254960 CA368204490 |
204 | A>P | No |
ClinGen Ensembl |
|
|
rs74386776 CA4343105 |
205 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA368204472 rs1442486386 |
205 | T>R | No |
ClinGen TOPMed |
|
|
rs1211484084 CA368204458 COSM1093123 |
206 | A>V | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs1303027285 CA368204447 |
207 | T>K | No |
ClinGen gnomAD |
|
|
rs748204858 CA4343103 |
208 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1030030514 CA161994559 |
210 | D>A | No |
ClinGen Ensembl |
|
|
CA368204399 rs1334907715 |
211 | V>L | No |
ClinGen gnomAD |
|
|
CA4343101 rs758323957 |
213 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1395688683 CA368204345 |
215 | F>L | No |
ClinGen gnomAD |
|
|
CA368204299 rs1295884419 |
218 | E>* | No |
ClinGen gnomAD |
|
|
CA4343100 rs750272212 |
218 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs778654614 CA4343099 COSM602754 |
221 | R>* | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs148603551 COSM602756 CA4343098 |
221 | R>L | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs148603551 CA4343097 |
221 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs201875833 CA4343096 |
222 | F>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201875833 CA4343095 |
222 | F>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1373963945 CA368204245 |
223 | A>S | No |
ClinGen gnomAD |
|
|
rs752183582 CA4343094 |
225 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA368204216 rs1418941852 |
226 | C>R | No |
ClinGen gnomAD |
|
|
CA4343093 rs768198430 |
227 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs943356283 CA368204201 |
227 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
CA161994483 rs943356283 |
227 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs147146654 CA4343092 |
229 | S>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1562776108 CA368204176 |
229 | S>P | No |
ClinGen Ensembl |
|
|
CA4343091 rs530971102 |
230 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4343090 RCV001350009 rs201086023 |
230 | R>H | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs1333545351 CA368204167 |
231 | T>A | No |
ClinGen TOPMed |
|
| TCGA novel | 232 | N>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4343089 rs763330940 |
233 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1427245202 CA368204147 |
234 | T>A | No |
ClinGen gnomAD |
|
|
rs769996643 CA4343087 |
234 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769996643 CA368204143 |
234 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781315839 CA4343086 |
235 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs1416053668 CA368204124 |
236 | H>D | No |
ClinGen TOPMed gnomAD |
|
|
CA368204118 rs772042070 |
236 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368204126 rs1416053668 |
236 | H>N | No |
ClinGen TOPMed gnomAD |
|
|
CA4343084 rs772042070 |
236 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368204099 rs1311772611 |
238 | G>R | No |
ClinGen gnomAD |
|
|
CA368204090 rs1416675927 |
238 | G>V | No |
ClinGen gnomAD |
|
|
CA368204080 rs1276231898 |
240 | K>Q | No |
ClinGen TOPMed |
|
|
CA368204028 rs1159455564 |
243 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs377645651 CA4343083 |
244 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368204022 rs1453571482 |
244 | H>Y | No |
ClinGen gnomAD |
|
|
CA4343082 rs200540593 |
247 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368203984 rs1167789173 |
247 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1256846188 CA368203966 |
248 | V>A | No |
ClinGen gnomAD |
|
|
rs919437168 CA161994424 |
248 | V>F | No |
ClinGen TOPMed |
|
|
rs1185902898 CA368203955 |
249 | G>D | No |
ClinGen gnomAD |
|
|
rs757064826 CA4343081 |
250 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA368203907 rs1262759855 |
253 | T>N | No |
ClinGen gnomAD |
|
|
CA368203905 rs1262759855 |
253 | T>S | No |
ClinGen gnomAD |
|
|
CA4343080 rs536634385 |
254 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 255 | D>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368203870 rs1191357403 |
256 | T>A | No |
ClinGen TOPMed |
|
|
rs767106665 CA368203809 |
260 | L>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4343076 rs767106665 |
260 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1172081311 CA368203806 |
261 | I>F | No |
ClinGen TOPMed |
|
|
rs1292065383 CA368203794 |
262 | N>H | No |
ClinGen gnomAD |
|
|
CA4343075 rs759077484 |
263 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368203764 rs1327817572 |
265 | N>K | No |
ClinGen gnomAD |
|
|
CA368203767 rs1458822267 |
265 | N>S | No |
ClinGen TOPMed |
|
|
rs1318639709 CA368203754 |
267 | M>T | No |
ClinGen gnomAD |
|
|
CA368203744 rs1381981662 |
268 | I>T | No |
ClinGen gnomAD |
|
|
rs1584254756 CA368203742 |
269 | N>D | No |
ClinGen Ensembl |
|
|
COSM1137772 CA368203739 rs1383324395 |
269 | N>S | kidney [Cosmic] | No |
ClinGen cosmic curated gnomAD |
| TCGA novel | 271 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368203725 rs1167588162 |
271 | Y>H | No |
ClinGen gnomAD |
|
| TCGA novel | 272 | F>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA161994357 rs774344690 |
275 | H>R | No |
ClinGen gnomAD |
|
|
CA4343074 rs373997294 |
275 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368203685 rs1373825838 |
276 | Q>P | No |
ClinGen gnomAD |
|
|
rs1445516752 CA368203680 |
277 | V>I | No |
ClinGen gnomAD |
|
| TCGA novel | 281 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4343073 rs147441374 |
283 | C>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs142802656 CA4343072 |
283 | C>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA161994351 rs553862328 COSM1224631 |
285 | R>* | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA4343071 rs749702071 COSM1093122 |
285 | R>Q | ovary Variant assessed as Somatic; 0.0 impact. endometrium [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs765431657 CA161994319 |
286 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs762068763 CA4343069 |
287 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1270391389 CA368203585 |
288 | R>T | No |
ClinGen gnomAD |
|
|
rs1226186158 CA368203575 |
289 | F>L | No |
ClinGen gnomAD |
|
|
CA4343068 rs776730076 RCV001314059 |
289 | F>S | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs139583166 CA4343067 |
290 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1269283852 CA368203554 |
291 | E>Q | No |
ClinGen TOPMed |
|
| TCGA novel | 292 | V>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368203540 rs747041511 |
292 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA4343066 rs747041511 |
292 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1394382631 CA368203525 |
293 | L>S | No |
ClinGen gnomAD |
|
|
rs150846245 CA4343064 |
295 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368203503 rs1397239193 |
295 | P>L | No |
ClinGen gnomAD |
|
|
CA368203510 rs150846245 COSM1093121 |
295 | P>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA161994302 rs983174904 |
296 | N>Y | No |
ClinGen TOPMed |
|
|
rs1474513247 CA368203483 |
297 | S>N | No |
ClinGen gnomAD |
|
|
CA4343063 rs200135790 |
298 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs141476915 CA4343061 |
299 | L>I | No |
ClinGen ESP ExAC |
|
|
CA161994273 rs928967178 |
301 | D>H | No |
ClinGen TOPMed |
|
|
CA368203401 rs1314705285 |
304 | V>L | No |
ClinGen gnomAD |
|
|
rs920285271 CA161994271 |
305 | I>T | No |
ClinGen TOPMed |
|
|
CA368203339 rs1219345775 |
307 | V>A | No |
ClinGen gnomAD |
|
|
CA368203344 rs1252263478 |
307 | V>M | No |
ClinGen gnomAD |
|
|
CA368203308 rs1584254614 |
309 | I>V | No |
ClinGen Ensembl |
|
|
CA161994263 rs201532367 |
313 | F>L | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 314 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA161994262 rs200226729 |
314 | S>P | No |
ClinGen gnomAD |
|
|
rs780945410 CA4343058 |
315 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1022496390 CA161994256 |
316 | C>Y | No |
ClinGen Ensembl |
|
|
rs1336650603 CA368203086 |
319 | D>E | No |
ClinGen Ensembl |
|
|
CA368203104 rs1404457838 |
319 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA4343056 rs751049946 |
320 | Y>D | No |
ClinGen ExAC gnomAD |
|
|
rs528938533 CA4343054 |
321 | F>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs865871534 CA161994249 |
322 | Q>* | No |
ClinGen Ensembl |
|
|
CA161994242 rs915824696 |
323 | I>T | No |
ClinGen TOPMed |
|
|
rs1355632227 CA368202955 |
325 | M>R | No |
ClinGen gnomAD |
|
|
rs1444939762 CA368202962 |
325 | M>V | No |
ClinGen gnomAD |
|
|
CA368202942 RCV000498411 COSM39394 rs1554337294 |
326 | Q>* | large_intestine central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
|
CA368202907 rs1409939113 |
327 | N>S | No |
ClinGen TOPMed |
|
|
CA4343053 rs750797668 |
328 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs762040521 CA4343051 |
331 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
RCV000514266 CA4343050 rs76377166 |
332 | I>T | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs760747768 CA4343048 |
334 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA368202738 rs1189250576 |
336 | S>I | No |
ClinGen gnomAD |
|
|
CA368202706 rs1180456100 |
338 | K>N | No |
ClinGen gnomAD |
|
|
CA4343045 rs770823880 |
338 | K>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs749219187 CA4343044 |
339 | F>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA4343042 rs772985071 |
342 | F>I | No |
ClinGen ExAC gnomAD |
|
|
rs747896981 RCV001346184 CA4343040 |
342 | F>L | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA4343041 rs769654702 COSM1177117 |
342 | F>S | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1225847816 CA368202626 |
343 | V>G | No |
ClinGen gnomAD |
|
|
CA4343037 rs180705437 |
344 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1351999472 CA368202614 |
345 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA368202592 rs1444597997 |
346 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA368202594 rs1444597997 |
346 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs998406313 CA161994094 |
346 | G>R | No |
ClinGen gnomAD |
|
|
rs899786219 CA161994092 |
347 | T>A | No |
ClinGen Ensembl |
|
|
rs1018136386 CA161994086 |
347 | T>I | No |
ClinGen Ensembl |
|
|
RCV001009116 rs1584254471 |
348 | S>missing | No |
ClinVar dbSNP |
|
|
rs750968624 CA4343034 |
348 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368202486 rs200454238 CA4343031 |
351 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1007550761 CA161994071 |
351 | D>N | No |
ClinGen gnomAD |
|
|
CA4343032 rs757652918 RCV001298419 |
351 | D>V | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
RCV000788816 rs1584254441 CA368202468 |
352 | I>T | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs760872638 CA4343029 |
352 | I>V | No |
ClinGen ExAC TOPMed |
|
|
CA368202442 rs1188050221 |
354 | K>E | No |
ClinGen gnomAD |
|
|
rs759486201 CA4343026 |
355 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4343023 rs761769404 |
357 | V>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 360 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368202266 rs1284159862 |
361 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1284159862 CA368202269 |
361 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA368202181 rs1337628777 |
365 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
CA368202189 rs1227048825 |
365 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA4343022 rs776558044 |
366 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1414305058 CA368202146 |
367 | K>* | No |
ClinGen gnomAD |
|
|
rs1414305058 CA368202148 |
367 | K>E | No |
ClinGen gnomAD |
|
| TCGA novel | 368 | T>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368202095 rs1290890913 |
369 | L>P | No |
ClinGen gnomAD |
|
|
CA368202097 rs1290890913 |
369 | L>Q | No |
ClinGen gnomAD |
|
|
CA4343020 rs768476519 |
370 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA4343019 rs746624344 |
371 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs771670580 CA161993962 |
372 | S>Y | No |
ClinGen Ensembl |
|
|
rs779529107 CA4343018 |
373 | R>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 375 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1206127399 CA368201985 |
376 | A>E | No |
ClinGen TOPMed |
|
|
rs191186450 CA4343017 |
376 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA368201954 rs1419958645 |
378 | E>* | No |
ClinGen gnomAD |
|
|
CA4343016 rs572262935 |
379 | K>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA4343015 rs779477356 |
379 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs757755959 CA4343014 |
382 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs756644467 CA161993893 |
382 | A>V | No |
ClinGen Ensembl |
|
|
rs754259416 CA4343013 |
383 | K>I | No |
ClinGen ExAC gnomAD |
|
|
CA4343012 rs145917598 |
385 | N>K | No |
ClinGen ExAC TOPMed |
|
|
CA161993858 rs377598068 |
386 | K>Q | No |
ClinGen ESP TOPMed |
|
|
CA4343010 rs756431711 |
388 | E>K | No |
ClinGen ExAC TOPMed |
|
|
CA368201776 rs756431711 |
388 | E>Q | No |
ClinGen ExAC TOPMed |
|
| TCGA novel | 389 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1056651627 CA161993786 |
391 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs752940223 CA4343007 |
392 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
CA368201666 rs1391714765 |
392 | P>S | No |
ClinGen TOPMed |
|
|
CA4343004 rs759667713 |
399 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 402 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4343002 rs765279964 |
404 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1432708965 CA368198333 |
407 | N>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1326544034 CA368198241 |
412 | Q>* | No |
ClinGen gnomAD |
|
|
CA368198236 rs1467105622 |
412 | Q>R | No |
ClinGen TOPMed |
|
|
rs1347566996 CA368198205 |
414 | I>L | No |
ClinGen gnomAD |
|
|
rs1347566996 CA368198202 |
414 | I>V | No |
ClinGen gnomAD |
|
|
CA4342998 rs760493464 |
416 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA368198108 rs1455883160 |
418 | N>D | No |
ClinGen gnomAD |
|
|
CA368198007 rs1213562023 |
422 | P>T | No |
ClinGen gnomAD |
|
|
rs775218383 CA4342997 |
423 | D>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 426 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368197893 rs1403551402 |
427 | H>Y | No |
ClinGen TOPMed |
|
|
rs1009496984 CA161992845 |
428 | L>S | No |
ClinGen TOPMed |
|
|
CA368197785 rs1272839868 |
432 | K>R | No |
ClinGen gnomAD |
|
| TCGA novel | 433 | E>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1225862903 CA368197781 |
433 | E>Q | No |
ClinGen gnomAD |
|
|
CA368197677 rs1386109293 |
436 | W>* | No |
ClinGen gnomAD |
|
|
rs745449703 CA4342993 |
436 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778272982 CA4342992 |
438 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA4342991 rs771477477 |
439 | V>E | No |
ClinGen ExAC gnomAD |
|
|
CA368197621 rs1462106983 |
440 | L>S | No |
ClinGen gnomAD |
|
|
rs749825806 CA4342990 |
443 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778205005 CA161992797 |
446 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778205005 CA4342989 |
446 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs946402503 CA368197449 |
448 | I>F | No |
ClinGen TOPMed |
|
|
CA161992790 rs946402503 |
448 | I>V | No |
ClinGen TOPMed |
|
|
VAR_031527 CA4342987 rs10239435 |
449 | N>S | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1480373066 CA368197309 |
451 | V>A | No |
ClinGen gnomAD |
|
|
rs1272726890 CA368197306 |
452 | V>I | No |
ClinGen gnomAD |
|
|
rs117649834 CA368197254 |
454 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs117649834 CA4342985 |
454 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs147552284 CA4342983 |
457 | E>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs766341846 CA4342982 |
457 | E>D | No |
ClinGen ExAC TOPMed |
|
|
rs145018604 CA4342981 |
459 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368196950 rs1584254137 |
463 | L>F | No |
ClinGen Ensembl |
|
|
CA4342978 rs760548498 |
468 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1018187277 CA161992681 |
470 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1005428790 CA161992664 |
472 | Q>* | No |
ClinGen Ensembl |
|
|
rs759088852 CA4342975 |
475 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA4342974 rs774015303 |
477 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA368196640 rs1160532975 |
478 | E>G | No |
ClinGen gnomAD |
|
|
CA4342973 rs78564070 |
479 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 481 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1436319354 CA368196571 |
482 | T>I | No |
ClinGen TOPMed |
|
| TCGA novel | 487 | H>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4342971 rs376258200 |
487 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1360150471 CA368196435 |
489 | P>T | No |
ClinGen TOPMed |
|
| TCGA novel | 490 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 491 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 492 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs770283908 CA4342970 |
494 | C>* | No |
ClinGen ExAC gnomAD |
|
|
rs1388675745 CA368196293 |
495 | N>K | No |
ClinGen TOPMed |
|
|
rs1199630602 CA368196268 |
497 | R>K | No |
ClinGen gnomAD |
|
|
rs748607268 CA4342969 |
498 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA4342968 rs781392503 |
499 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1239625577 CA368196218 |
500 | L>F | No |
ClinGen gnomAD |
|
|
rs1328395107 CA368196178 |
502 | S>C | No |
ClinGen gnomAD |
|
|
CA368196097 rs1234654650 |
506 | K>* | No |
ClinGen gnomAD |
|
|
rs1355690640 CA368196073 |
507 | P>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1355690640 CA368196072 |
507 | P>R | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 507 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 509 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368196036 rs1333144904 |
509 | D>Y | Variant assessed as Somatic; 4.625e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA4342966 rs200929214 |
510 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1270749216 CA368195961 |
513 | W>R | No |
ClinGen gnomAD |
|
| TCGA novel | 514 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368195944 rs1214838421 |
514 | Q>K | No |
ClinGen TOPMed |
|
|
rs1258665155 CA368195928 |
515 | R>K | No |
ClinGen TOPMed |
|
|
CA368195908 rs1410424628 |
516 | E>D | No |
ClinGen gnomAD |
|
|
rs780371064 CA4342964 |
516 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1489295108 CA368195904 |
517 | R>G | No |
ClinGen TOPMed |
|
|
rs758562254 COSM1093117 CA4342963 |
519 | S>P | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA |
|
rs750458859 CA4342961 |
524 | L>R | No |
ClinGen ExAC |
|
|
rs1448984067 CA368195787 |
526 | S>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA368195784 COSM453575 rs1448984067 |
526 | S>L | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA4342959 rs755991147 |
528 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 529 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs200619557 CA4342958 |
530 | H>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs200619557 CA368195740 |
530 | H>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA368195693 rs1464375337 |
533 | I>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA4342957 rs767185347 |
534 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA4342956 rs759326331 |
536 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759326331 CA368195660 |
536 | R>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs142237040 CA4342955 |
540 | L>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368195590 rs1294319202 |
542 | V>I | No |
ClinGen TOPMed |
|
|
CA4342953 rs762514368 |
543 | F>C | No |
ClinGen ExAC gnomAD |
|
|
CA4342954 rs765948101 |
543 | F>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs148654574 CA4342952 |
543 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368195542 rs1434907175 |
546 | L>P | No |
ClinGen gnomAD |
|
|
rs1328573156 CA368195528 |
547 | S>C | No |
ClinGen gnomAD |
|
|
CA368195536 rs1387089801 |
547 | S>P | No |
ClinGen gnomAD |
|
|
CA4342950 rs748567776 |
548 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA4342951 rs770331176 |
548 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1584253938 TCGA novel CA368195512 |
549 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Ensembl |
|
CA161992513 CA4342948 rs10279499 VAR_031528 |
549 | V>L | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA4342949 rs10279499 |
549 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1323260181 CA368195498 |
550 | D>V | No |
ClinGen TOPMed |
|
|
CA368195467 rs1373912469 |
552 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA368195471 rs1373912469 |
552 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1373912469 CA368195469 |
552 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1188960627 CA368195443 |
554 | D>E | No |
ClinGen gnomAD |
|
|
rs1584253924 CA368195453 |
554 | D>N | No |
ClinGen Ensembl |
|
|
COSM1452879 rs780430573 CA4342946 |
555 | P>S | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs772420717 CA4342945 |
556 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs6960328 CA161992498 |
557 | I>S | No |
ClinGen TOPMed gnomAD |
|
|
rs6960328 CA368195410 |
557 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
COSM1452878 CA368195384 rs1452141347 |
559 | T>S | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
| TCGA novel | 560 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs139784645 CA4342944 |
562 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs779115874 CA4342943 |
565 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 567 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 567 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4342942 rs756118015 |
570 | M>R | No |
ClinGen ExAC gnomAD |
|
|
rs781126245 CA4342940 |
574 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA368195133 rs1363405437 |
574 | L>P | No |
ClinGen gnomAD |
|
|
rs1363405437 CA368195130 |
574 | L>R | No |
ClinGen gnomAD |
|
|
rs754732825 CA4342939 |
575 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA4342937 rs751349091 |
576 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA368195100 rs1562775365 |
576 | I>V | No |
ClinGen Ensembl |
|
|
CA368195059 rs1321655442 |
577 | C>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1331046012 CA368195077 |
577 | C>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1411791490 CA368195051 CA368195054 |
578 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1168252292 CA368195012 |
579 | H>Q | No |
ClinGen gnomAD |
|
|
CA161992450 rs948409387 |
581 | H>P | No |
ClinGen TOPMed |
|
|
COSM747527 CA368194958 rs1388047206 |
582 | I>V | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1195272780 CA368194930 |
584 | Q>* | No |
ClinGen gnomAD |
|
|
rs528742571 CA4342934 |
585 | G>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1478284015 CA368194911 |
585 | G>R | No |
ClinGen gnomAD |
|
|
CA368194850 rs1196133083 |
586 | W>C | No |
ClinGen gnomAD |
|
|
CA4342933 rs764754041 |
587 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA368194828 rs1251931171 |
588 | D>Y | No |
ClinGen gnomAD |
|
|
CA4342932 rs761342789 |
593 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1282838740 CA368194710 |
594 | L>* | No |
ClinGen gnomAD |
|
|
CA368194665 rs1584253799 |
597 | H>P | No |
ClinGen Ensembl |
|
|
CA4342931 rs777021540 |
597 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs767325816 CA161992399 |
598 | Q>* | No |
ClinGen TOPMed |
|
|
CA368194658 rs767325816 |
598 | Q>K | No |
ClinGen TOPMed |
|
|
CA368194586 rs1336374390 |
602 | S>* | No |
ClinGen gnomAD |
|
|
CA368194591 COSM1550884 rs1444435470 |
602 | S>A | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs181767582 CA368194548 |
604 | Q>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1408162880 CA368194545 |
605 | C>R | No |
ClinGen gnomAD |
|
|
CA368194542 rs1377517657 |
605 | C>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs775986193 CA4342927 |
606 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs367869345 CA4342926 |
610 | S>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1170802631 CA368194476 |
611 | L>F | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 612 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779236948 CA4342924 |
613 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1471135137 CA368194455 |
613 | E>K | No |
ClinGen gnomAD |
|
|
CA368194436 rs1481859165 |
614 | I>N | No |
ClinGen gnomAD |
|
|
rs770928576 CA4342923 |
614 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs749321461 CA4342922 |
615 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 617 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1211223922 CA368194383 |
618 | I>V | No |
ClinGen gnomAD |
|
| TCGA novel | 619 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs947182169 CA368194348 |
620 | K>I | No |
ClinGen TOPMed gnomAD |
|
|
CA368194359 rs1184610715 |
620 | K>Q | No |
ClinGen TOPMed |
|
|
CA161992365 rs947182169 |
620 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1226716184 CA368194268 |
627 | S>P | No |
ClinGen gnomAD |
|
|
CA368194222 rs1326879426 |
630 | R>K | No |
ClinGen TOPMed |
|
|
CA368194197 rs755177438 |
632 | L>* | No |
ClinGen gnomAD |
|
|
CA161992329 rs755177438 |
632 | L>S | No |
ClinGen gnomAD |
|
|
CA368194188 rs1331951205 |
633 | P>T | No |
ClinGen gnomAD |
|
|
CA4342915 rs750094300 |
635 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs529506807 CA4342914 |
636 | G>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 637 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4342912 rs753387240 |
638 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761237340 CA4342913 |
638 | S>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 639 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 640 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1218400445 CA368194080 |
642 | L>P | No |
ClinGen gnomAD |
|
|
CA4342908 rs772597625 |
643 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1268126756 CA368194011 |
648 | I>T | No |
ClinGen gnomAD |
|
|
rs1584253679 CA368194006 |
649 | M>V | No |
ClinGen Ensembl |
|
|
rs149322312 CA4342907 |
652 | L>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4342906 rs774718479 |
653 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA368193945 rs1313564165 |
654 | I>N | No |
ClinGen gnomAD |
|
|
CA368193921 rs1227886639 |
656 | C>S | No |
ClinGen TOPMed gnomAD |
|
|
CA4342903 rs773317265 |
660 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA368193854 rs1584253640 |
660 | C>Y | No |
ClinGen Ensembl |
|
| TCGA novel | 661 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368193833 rs1584253631 |
661 | E>G | No |
ClinGen Ensembl |
|
|
CA368193820 rs1487087558 |
662 | G>D | No |
ClinGen Ensembl |
|
|
CA368193807 rs1584253613 |
663 | T>K | No |
ClinGen Ensembl |
|
|
rs746976269 CA4342901 |
668 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368193692 rs1203403420 |
671 | K>N | No |
ClinGen gnomAD |
|
|
rs1026536506 CA161992276 |
678 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA161992291 rs766374544 |
678 | S>P | No |
ClinGen Ensembl |
|
|
CA161992255 rs375184765 |
679 | K>N | No |
ClinGen ESP |
|
|
CA161992228 rs911063776 |
681 | E>A | No |
ClinGen Ensembl |
|
| TCGA novel | 681 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4342899 rs145864982 |
681 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1242936205 CA368193522 |
683 | F>C | No |
ClinGen TOPMed |
|
|
CA161992224 rs267601629 |
687 | G>D | No |
ClinGen Ensembl |
|
|
CA4342897 rs778499845 |
688 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
CA368193446 rs1188656521 |
688 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA161992196 rs867874670 |
690 | S>P | No |
ClinGen Ensembl |
|
|
CA4342895 rs764448205 |
691 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs756922616 CA4342896 |
691 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4342894 rs763629478 |
692 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1470221576 CA368193346 |
693 | N>K | No |
ClinGen gnomAD |
|
|
CA368193178 rs1230308617 |
700 | S>T | No |
ClinGen gnomAD |
|
|
CA4342889 rs532883519 |
706 | V>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs774762640 CA4342887 |
707 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA368193016 rs1562775151 |
707 | K>T | No |
ClinGen Ensembl |
|
| TCGA novel | 708 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1293592983 CA368192950 |
709 | D>N | No |
ClinGen gnomAD |
|
| TCGA novel | 710 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs758668269 CA4342885 |
713 | R>I | No |
ClinGen ExAC gnomAD |
|
|
CA161992113 rs1025964626 |
715 | E>D | No |
ClinGen Ensembl |
|
|
CA368192727 rs1428140272 |
716 | A>E | No |
ClinGen TOPMed |
|
|
rs1170148861 CA368192738 |
716 | A>T | No |
ClinGen gnomAD |
|
|
rs773263678 CA4342883 |
717 | M>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs773420311 CA4342880 |
721 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA368192510 rs1263093039 |
722 | A>V | No |
ClinGen TOPMed |
|
|
CA368192501 rs1321968696 |
723 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA4342878 rs771996844 COSM1093111 |
724 | S>Y | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA161992096 rs993540133 |
728 | T>R | No |
ClinGen Ensembl |
|
|
rs756902783 CA161992075 |
734 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1480787403 CA368192198 |
735 | L>P | No |
ClinGen TOPMed |
|
|
CA4342874 rs749002104 COSM1739343 |
737 | H>R | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
| TCGA novel | 738 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1301948946 CA368192126 |
739 | P>S | No |
ClinGen gnomAD |
|
|
CA4342873 rs777242540 |
740 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755699151 CA4342872 |
741 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA4342871 rs752250037 |
742 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA368192043 rs1409990491 |
743 | G>A | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 743 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368192016 rs1562775062 |
745 | T>A | No |
ClinGen Ensembl |
|
|
rs1398639696 CA368191965 |
748 | M>V | No |
ClinGen TOPMed |
|
|
rs751906946 CA4342868 |
749 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1378693567 CA368191858 CA368191857 |
752 | W>C | No |
ClinGen TOPMed gnomAD |
|
|
CA4342867 rs148339415 |
752 | W>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1175914307 CA368191853 |
753 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs773492970 CA4342865 |
754 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 755 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1183004790 CA368191745 |
758 | F>L | No |
ClinGen gnomAD |
|
|
rs1241800370 CA368191741 |
759 | R>G | No |
ClinGen TOPMed |
|
|
CA4342863 rs776683023 |
760 | C>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765380924 CA4342864 |
760 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4342862 rs776683023 |
760 | C>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772048217 CA4342861 |
761 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1203655184 CA368191704 |
762 | V>M | No |
ClinGen TOPMed |
|
| TCGA novel | 763 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4342860 rs138668310 |
764 | K>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 768 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368191409 rs1292331375 |
774 | G>E | No |
ClinGen TOPMed |
|
|
CA4342858 rs770783617 |
775 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA368191394 rs1562775026 |
775 | E>D | No |
ClinGen Ensembl |
|
|
rs1289660577 CA368191400 |
775 | E>G | No |
ClinGen gnomAD |
|
|
CA368191383 rs1228538865 |
776 | Q>E | No |
ClinGen gnomAD |
|
|
CA368191322 rs1349457436 |
778 | T>A | No |
ClinGen gnomAD |
|
|
CA4342856 rs777548695 |
779 | S>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 780 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4342853 COSM1550886 rs780816774 |
785 | A>S | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs780816774 CA4342854 |
785 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1159996433 CA368191108 CA368191111 |
786 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
CA4342852 rs754494280 |
786 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs1391546158 CA368191113 |
786 | M>R | No |
ClinGen gnomAD |
|
|
rs1391546158 CA368191115 |
786 | M>T | No |
ClinGen gnomAD |
|
|
rs200048561 CA4342851 |
787 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368191066 rs1410007797 |
788 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs780363399 CA4342850 |
788 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1424651375 CA368191043 |
789 | Q>* | No |
ClinGen gnomAD |
|
|
rs149202937 CA368191026 |
789 | Q>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs758790726 CA4342849 |
789 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs189020649 CA161991807 |
791 | Y>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA161991813 rs910617585 |
791 | Y>H | No |
ClinGen TOPMed |
|
|
rs753962507 CA4342845 |
792 | V>A | No |
ClinGen ExAC |
|
|
CA4342844 rs764190540 |
794 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368190871 rs1371855217 |
797 | L>I | No |
ClinGen TOPMed |
|
|
rs1562774966 CA368190801 |
800 | D>Y | No |
ClinGen Ensembl |
|
|
CA4342840 rs541996783 |
803 | E>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA368190654 RCV000520675 rs1554337067 |
807 | V>I | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA368190564 rs1457200198 |
813 | S>C | No |
ClinGen gnomAD |
|
|
rs769609045 CA4342836 |
814 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs963953327 CA161991684 |
817 | A>G | No |
ClinGen TOPMed |
|
|
rs1165082747 CA368190522 |
817 | A>S | No |
ClinGen gnomAD |
|
|
CA368190526 rs1165082747 |
817 | A>T | No |
ClinGen gnomAD |
|
| TCGA novel | 818 | I>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1360447206 CA368190517 COSM357657 |
818 | I>V | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs1245520018 CA368190506 |
819 | A>S | No |
ClinGen TOPMed |
|
|
rs868190186 CA161991678 |
819 | A>V | No |
ClinGen TOPMed |
|
|
COSM1093109 CA368190472 RCV000784941 rs1186536794 |
824 | R>* | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ClinVar NCI-TCGA TOPMed dbSNP gnomAD |
|
CA368190470 rs1435946172 |
824 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs780941321 CA4342834 |
826 | E>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 826 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs185035646 CA4342832 |
830 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4342831 rs185035646 |
830 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1315086645 CA368190411 |
831 | I>V | No |
ClinGen gnomAD |
|
|
rs1189365918 CA368190396 |
832 | I>F | No |
ClinGen TOPMed |
|
|
CA368190373 rs1281452134 |
834 | N>S | No |
ClinGen gnomAD |
|
|
rs1211174577 CA368190365 |
835 | C>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1264534873 CA368190337 |
837 | R>G | No |
ClinGen gnomAD |
|
|
CA368190333 rs1161258885 |
837 | R>K | No |
ClinGen TOPMed |
|
|
rs758821945 CA4342828 |
837 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA4342827 rs374488670 |
838 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368190317 rs1298844045 |
839 | Q>K | No |
ClinGen TOPMed gnomAD |
|
|
rs757579946 CA4342825 |
842 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs571778033 CA4342824 |
843 | K>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4342823 rs764243484 |
845 | A>V | No |
ClinGen ExAC TOPMed |
|
|
CA368190212 rs1387462152 |
848 | P>S | No |
ClinGen gnomAD |
|
|
CA4342822 rs760814702 |
849 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA368190176 rs1161627399 |
851 | I>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| TCGA novel | 852 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA161991485 rs111518136 |
853 | V>A | No |
ClinGen Ensembl |
|
|
rs534758372 CA4342820 |
853 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs902827679 CA161991477 |
854 | I>V | No |
ClinGen TOPMed |
|
|
rs762767484 CA4342819 |
855 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368190088 rs1395482864 |
859 | P>L | No |
ClinGen gnomAD |
|
|
rs765143310 CA4342817 |
859 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA4342816 rs761640404 |
861 | E>V | No |
ClinGen ExAC TOPMed |
|
|
rs768185403 CA4342813 |
862 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA4342814 rs776423173 |
862 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
rs935052997 CA161991424 |
867 | L>I | No |
ClinGen Ensembl |
|
|
CA4342812 RCV001820214 rs746591776 |
871 | E>* | No |
ClinGen ClinVar ExAC TOPMed dbSNP |
|
|
rs772677852 CA4342809 COSM1093108 |
874 | E>* | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs772677852 CA368189929 |
874 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1275728694 CA368189913 |
876 | H>Y | No |
ClinGen gnomAD |
|
|
CA4342807 rs149737906 |
880 | E>K | No |
ClinGen ESP ExAC gnomAD |
|
|
rs140921998 CA4342806 |
881 | D>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs868542397 CA161991413 |
881 | D>N | No |
ClinGen Ensembl |
|
|
rs199922969 CA4342805 |
882 | F>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1181483736 COSM1093106 CA368189864 |
882 | F>L | large_intestine Variant assessed as Somatic; impact. endometrium [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA4342804 rs778037358 |
884 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1584253034 CA368189853 |
884 | S>P | No |
ClinGen Ensembl |
|
|
rs752861956 CA4342802 |
886 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs756267675 CA4342803 |
886 | M>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1428684888 CA368189841 |
886 | M>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA368189819 rs1370841140 |
889 | K>Q | No |
ClinGen TOPMed |
|
|
CA4342801 rs767522783 |
893 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs79303965 RCV000974087 CA4342800 |
894 | K>E | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA368189776 rs1584253002 |
894 | K>N | No |
ClinGen Ensembl |
|
|
rs1179186128 CA368189773 |
895 | E>* | No |
ClinGen TOPMed |
|
|
rs142611434 CA4342799 |
896 | Y>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1417279425 CA368189759 |
897 | I>V | No |
ClinGen gnomAD |
|
|
CA4342797 rs181919575 |
898 | E>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs776558032 CA4342796 |
900 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368189729 rs1376532119 |
901 | V>A | No |
ClinGen gnomAD |
|
|
rs1584252971 CA368189731 |
901 | V>F | No |
ClinGen Ensembl |
|
|
rs139336044 CA4342794 |
902 | R>Q | No |
ClinGen ESP ExAC gnomAD |
|
|
COSM1664035 CA4342795 rs763861072 |
902 | R>W | kidney [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA368189721 rs1252182538 |
903 | N>I | No |
ClinGen gnomAD |
|
|
CA4342792 rs771506632 |
904 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1295016722 CA368189707 |
905 | L>P | No |
ClinGen TOPMed |
|
|
rs745326169 CA4342791 |
907 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1225316353 CA368189675 |
910 | I>V | No |
ClinGen TOPMed |
|
|
CA161991282 rs918543817 |
911 | F>L | No |
ClinGen Ensembl |
|
|
CA368189648 rs1344954312 |
914 | E>K | No |
ClinGen gnomAD |
|
|
CA4342789 rs771424487 |
915 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs549974601 CA4342788 |
916 | K>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1230353822 CA368189635 |
916 | K>Q | No |
ClinGen gnomAD |
|
|
rs777968031 CA4342787 |
917 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs748338739 CA4342785 |
919 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs369626579 CA4342784 |
922 | A>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs369626579 CA368189597 COSM287498 |
922 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA gnomAD |
|
CA368189594 rs1291884139 |
922 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs755110531 CA4342783 |
923 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4342782 rs374919171 |
925 | N>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs765319328 CA4342781 |
936 | S>* | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 938 | C>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368189496 rs1180925271 |
938 | C>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA368189490 rs1239530122 |
938 | C>W | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 940 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs963702927 CA161991182 |
942 | L>S | No |
ClinGen TOPMed |
|
|
CA368189457 rs1442318478 |
943 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA368189448 rs1261886731 |
944 | I>S | No |
ClinGen gnomAD |
|
|
CA368189445 rs1210656416 |
945 | G>R | No |
ClinGen gnomAD |
|
|
rs1199442199 CA368189423 |
948 | K>E | No |
ClinGen TOPMed |
|
|
rs1430622499 CA368189421 |
948 | K>T | No |
ClinGen TOPMed |
|
|
rs151038564 CA4342779 |
949 | A>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs151038564 CA4342778 |
949 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1267586744 CA368189412 |
950 | F>L | No |
ClinGen gnomAD |
|
|
rs1381643077 CA368189402 |
951 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1381643077 CA368189400 |
951 | W>L | No |
ClinGen TOPMed gnomAD |
|
|
CA161991141 rs959103332 |
951 | W>R | No |
ClinGen TOPMed gnomAD |
|
|
CA4342776 rs760472475 |
952 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201505731 RCV001817060 CA4342777 RCV000879845 CA368189395 |
952 | G>R | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1334986461 CA368189387 |
953 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1002606282 CA161991107 |
954 | E>G | No |
ClinGen TOPMed |
|
|
rs201250385 CA4342775 |
956 | F>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767133608 CA4342774 |
956 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA368189363 rs1458757636 |
957 | E>* | No |
ClinGen gnomAD |
|
|
CA368189340 rs1221609167 |
960 | M>V | No |
ClinGen TOPMed |
|
|
rs759114422 CA4342772 |
961 | G>C | No |
ClinGen ExAC gnomAD |
|
|
CA4342771 rs773839015 |
963 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA368189309 rs1426492394 |
964 | S>C | No |
ClinGen gnomAD |
|
|
rs771467459 CA4342770 |
966 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs764933913 CA161991061 |
971 | E>D | No |
ClinGen Ensembl |
|
|
CA368189233 CA368189234 rs867375532 |
976 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA161991060 rs867375532 |
976 | G>W | No |
ClinGen TOPMed gnomAD |
|
|
CA368189218 COSM354894 rs1241697603 |
978 | Y>C | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA161991059 rs982076713 |
978 | Y>H | No |
ClinGen Ensembl |
|
|
rs370900227 CA4342769 |
979 | C>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1465767520 COSM602762 CA368189200 |
981 | V>L | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
RCV001091387 rs774215434 |
985 | H>missing | No |
ClinVar dbSNP |
|
|
CA368189158 rs1290938428 |
987 | L>S | No |
ClinGen gnomAD |
|
|
CA4342767 rs773718012 |
988 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA368189148 COSM1093103 rs1358384466 |
989 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1312691976 CA368189135 |
990 | E>D | No |
ClinGen gnomAD |
|
|
CA368189115 rs1437132950 |
994 | E>K | No |
ClinGen gnomAD |
|
|
rs748476361 CA4342765 |
998 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1490345792 CA368189079 |
998 | K>N | No |
ClinGen TOPMed |
|
|
rs1428124013 CA368189062 |
1000 | Y>* | No |
ClinGen gnomAD |
|
| TCGA novel | 1000 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368189059 rs1351245494 |
1001 | H>Y | No |
ClinGen gnomAD |
|
|
rs563839759 CA4342764 |
1002 | L>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4342762 rs747139029 |
1005 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA161991004 rs760546785 |
1008 | M>K | No |
ClinGen Ensembl |
|
|
rs780254598 CA4342761 |
1008 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM394350 CA368188996 rs1159405890 |
1010 | D>Y | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs893964928 CA161990996 |
1013 | T>I | No |
ClinGen TOPMed |
|
| TCGA novel | 1013 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368188955 rs1426721125 |
1016 | L>M | No |
ClinGen TOPMed |
|
|
CA4342758 COSM198396 rs753744139 |
1019 | D>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA161990955 rs1039989488 |
1020 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA368188916 rs1489928144 |
1021 | G>D | No |
ClinGen gnomAD |
|
|
CA368188909 rs1403067534 |
1022 | M>I | No |
ClinGen TOPMed |
|
|
rs1342781533 CA368188910 |
1022 | M>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1342781533 CA368188911 |
1022 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
rs755868139 CA4342756 |
1022 | M>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1023 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1299787673 CA368188896 |
1024 | K>R | No |
ClinGen TOPMed |
|
|
rs1212750616 CA368188887 |
1025 | S>I | No |
ClinGen gnomAD |
|
| TCGA novel | 1025 | S>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368188859 rs1369011920 |
1029 | Q>* | No |
ClinGen gnomAD |
|
|
CA161990928 rs527335660 |
1030 | D>H | No |
ClinGen 1000Genomes |
|
|
CA4342753 rs759155667 |
1031 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1031 | M>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368188822 rs1490656723 |
1034 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs762391460 CA4342750 |
1037 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1430869194 CA368188796 |
1038 | R>S | No |
ClinGen gnomAD |
|
|
rs201576502 CA4342747 |
1040 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs201576502 CA4342748 |
1040 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4342746 COSM1452867 rs372955426 |
1040 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1791562308 RCV001326169 |
1044 | E>D | No |
ClinVar dbSNP |
|
|
rs576422045 CA4342743 |
1045 | G>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA161990827 rs1040705446 |
1045 | G>S | No |
ClinGen Ensembl |
|
|
CA368188659 rs267601628 |
1052 | S>C | No |
ClinGen gnomAD |
|
|
CA161990818 rs267601628 |
1052 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs772294939 CA4342742 |
1052 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs267601628 CA368188661 |
1052 | S>Y | No |
ClinGen gnomAD |
|
|
CA368188647 rs1313900953 |
1054 | F>S | No |
ClinGen TOPMed gnomAD |
|
|
rs889561142 CA161990802 |
1057 | A>V | No |
ClinGen TOPMed |
|
|
CA4342737 rs377438913 |
1059 | H>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs188451434 CA368188613 |
1059 | H>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs377438913 CA4342736 |
1059 | H>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4342738 rs756066590 |
1059 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368188600 rs1355058668 |
1061 | D>G | No |
ClinGen TOPMed |
|
|
rs751226142 CA4342734 |
1061 | D>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA4342732 rs373641119 |
1064 | N>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1050904688 CA161990765 |
1064 | N>S | No |
ClinGen TOPMed |
|
|
CA161990746 rs919338122 |
1066 | A>E | No |
ClinGen TOPMed |
|
|
CA368188542 rs1468351986 |
1070 | V>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
RCV000908064 RCV001818803 CA4342729 rs144312575 |
1072 | L>P | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
| TCGA novel | 1075 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs776966331 CA4342728 |
1076 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA368188481 rs1273026568 |
1076 | H>R | No |
ClinGen TOPMed |
|
|
rs1249495254 CA368188472 |
1077 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA368188474 COSM1093100 rs1199145168 |
1077 | R>W | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
CA368188439 rs1175313979 |
1080 | P>A | No |
ClinGen gnomAD |
|
|
CA368188422 rs1484175187 |
1081 | N>I | No |
ClinGen gnomAD |
|
|
CA368188420 rs139484963 |
1081 | N>K | No |
ClinGen ESP TOPMed |
|
|
rs761066297 CA161990684 |
1083 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4342725 rs764579322 |
1083 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA368188388 rs1320721453 |
1084 | I>N | No |
ClinGen gnomAD |
|
| TCGA novel | 1085 | C>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs775859770 CA4342723 |
1086 | Q>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA4342722 rs772420263 RCV001327755 RCV001820018 |
1086 | Q>P | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA4342721 rs374889916 |
1087 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368186101 rs1336582764 |
1090 | R>S | No |
ClinGen gnomAD |
|
|
CA368186095 rs1468704322 |
1091 | H>Y | No |
ClinGen gnomAD |
|
|
COSM1741766 rs781049422 CA4342717 |
1093 | Y>C | urinary_tract [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA368186057 rs1242792993 |
1094 | I>V | No |
ClinGen TOPMed |
|
|
CA4342716 rs754771247 |
1096 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA368185964 rs1471902652 |
1100 | G>V | No |
ClinGen TOPMed |
|
|
CA368185941 rs1362319999 |
1102 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
CA368185944 rs1362319999 |
1102 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs746799013 CA368185936 |
1103 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA368185894 rs1434170977 |
1106 | A>E | No |
ClinGen gnomAD |
|
|
CA368185872 rs1409346812 |
1108 | Q>* | No |
ClinGen TOPMed |
|
|
rs758043725 CA4342713 |
1111 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758043725 CA368185833 |
1111 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1113 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs909485395 CA161990599 |
1114 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA368185798 rs1382508495 |
1114 | P>T | No |
ClinGen Ensembl |
|
|
CA368185781 rs1249323755 |
1115 | D>H | No |
ClinGen gnomAD |
|
|
CA368185748 rs1584252440 |
1117 | S>F | No |
ClinGen Ensembl |
|
|
CA368185742 rs1335763070 |
1118 | Y>D | No |
ClinGen TOPMed |
|
|
rs764837624 CA4342711 |
1119 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs368299433 CA161990586 |
1121 | D>G | No |
ClinGen ESP |
|
|
rs756675922 CA4342710 |
1121 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1122 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368185691 rs754414260 |
1122 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4342709 rs754414260 |
1122 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368185682 rs1322632578 |
1123 | L>R | No |
ClinGen gnomAD |
|
|
rs144682052 CA161990573 |
1124 | G>D | No |
ClinGen ESP gnomAD |
|
|
CA368185628 rs1562774335 |
1128 | K>R | No |
ClinGen Ensembl |
|
|
rs761188861 CA4342707 |
1133 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA368185516 rs1270334861 |
1133 | W>* | No |
ClinGen TOPMed |
|
|
CA368185527 rs1321263432 |
1133 | W>R | No |
ClinGen gnomAD |
|
|
rs1360621625 CA368185481 |
1134 | W>* | No |
ClinGen TOPMed |
|
|
CA368185483 rs1383052650 |
1134 | W>R | No |
ClinGen gnomAD |
|
|
rs767683953 CA4342705 |
1135 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs376829052 CA4342706 |
1135 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs759775100 CA4342704 |
1136 | E>* | No |
ClinGen ExAC gnomAD |
|
|
COSM602765 rs749260299 CA4342701 |
1142 | G>R | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs928828925 CA161990521 |
1145 | S>T | No |
ClinGen TOPMed |
|
|
CA4342698 rs746851927 |
1146 | V>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA4342699 rs746851927 |
1146 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1262900622 CA368185046 |
1150 | I>L | No |
ClinGen TOPMed |
|
|
rs750579288 CA4342696 |
1150 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1151 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1490417831 CA368185017 |
1151 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1791553808 RCV001342630 |
1152 | L>V | No |
ClinVar dbSNP |
|
|
rs866347771 CA161990481 |
1153 | L>V | No |
ClinGen Ensembl |
|
| TCGA novel | 1154 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 1154 | D>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368184881 rs1299065278 |
1158 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1428995324 CA368184785 |
1161 | S>R | No |
ClinGen gnomAD |
|
|
CA4342692 rs149420683 |
1165 | E>Q | No |
ClinGen ESP ExAC gnomAD |
|
|
CA4342691 rs778482425 |
1166 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA4342690 rs756669343 |
1168 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767945606 CA368184570 |
1172 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA161990396 rs765358183 |
1172 | D>Y | No |
ClinGen Ensembl |
|
| TCGA novel | 1173 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4342687 rs566059003 RCV001818821 RCV000909634 |
1173 | R>S | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1422579495 CA368184558 |
1173 | R>T | No |
ClinGen gnomAD |
|
|
rs751811624 CA4342686 RCV001317422 |
1175 | Y>* | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs200851267 CA161990383 |
1175 | Y>H | No |
ClinGen Ensembl |
|
|
CA368184484 rs1475061694 |
1177 | V>A | No |
ClinGen gnomAD |
|
|
CA161990361 rs766505454 |
1179 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4342685 rs766505454 |
1179 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1200433231 CA368184422 |
1181 | L>F | No |
ClinGen gnomAD |
|
|
rs957239536 CA161990357 |
1181 | L>S | No |
ClinGen TOPMed |
|
|
rs1480540811 CA368184393 |
1183 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA161990334 rs879098714 |
1184 | K>E | No |
ClinGen Ensembl |
|
|
RCV001008263 rs1584252276 |
1187 | R>missing | No |
ClinVar dbSNP |
|
|
rs368696956 CA4342682 |
1188 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 1188 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368184241 rs1584252251 |
1194 | I>M | No |
ClinGen Ensembl |
|
|
CA368184244 rs1274150959 |
1194 | I>T | No |
ClinGen gnomAD |
|
|
CA4342681 rs760635054 |
1196 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs1007250074 CA161990296 |
1196 | G>R | No |
ClinGen TOPMed |
|
|
CA4342680 rs775361202 |
1198 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs891030635 CA161990283 |
1199 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA161990278 rs1031601806 |
1201 | I>R | No |
ClinGen TOPMed gnomAD |
|
|
rs771916377 CA4342679 |
1201 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA4342678 rs745587716 |
1202 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1050953316 CA161990272 |
1202 | E>K | No |
ClinGen TOPMed |
|
| TCGA novel | 1203 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs901457289 CA161990256 |
1203 | V>F | No |
ClinGen Ensembl |
|
|
rs1411903547 CA368184059 |
1208 | I>V | No |
ClinGen gnomAD |
|
|
CA368184023 rs1271123812 |
1210 | I>V | No |
ClinGen TOPMed |
|
|
rs748856394 CA4342675 |
1212 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA368183981 rs1490512363 |
1212 | Q>R | No |
ClinGen TOPMed |
|
|
rs1409277212 CA368183940 |
1214 | I>V | No |
ClinGen gnomAD |
|
|
CA4342674 rs34229036 |
1215 | P>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV001338232 CA4342672 rs34229036 |
1215 | P>L | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA4342673 rs34229036 |
1215 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs183833462 CA4342670 |
1217 | F>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs762437452 CA4342669 |
1217 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1218 | D>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368183829 rs1233759063 |
1218 | D>V | No |
ClinGen gnomAD |
|
|
CA368183764 rs1217426475 |
1220 | K>T | No |
ClinGen gnomAD |
|
|
CA4342666 rs200614323 |
1221 | N>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1281426594 CA368183713 |
1222 | E>* | No |
ClinGen gnomAD |
|
|
rs765325849 CA4342663 |
1226 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1304504966 CA368183609 |
1226 | R>T | No |
ClinGen TOPMed |
|
|
rs373722071 CA4342662 |
1227 | Y>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4342661 rs373722071 |
1227 | Y>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368183573 rs1374393583 |
1228 | M>I | No |
ClinGen gnomAD |
|
|
rs887804474 CA161990196 |
1229 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA368183555 rs1279886800 |
1229 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs771903224 CA4342660 |
1230 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1336024249 CA368183508 |
1231 | F>S | No |
ClinGen gnomAD |
|
|
rs759434397 CA4342659 |
1231 | F>V | No |
ClinGen ExAC gnomAD |
|
|
CA368183489 rs1173660476 |
1232 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1404666480 CA368183499 |
1232 | V>I | No |
ClinGen gnomAD |
|
|
rs371510515 CA161990159 |
1233 | S>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371510515 CA4342655 |
1233 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV001312127 rs1791548042 |
1234 | G>E | No |
ClinVar dbSNP |
|
|
rs769432527 CA4342654 |
1234 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA161990137 rs1037288683 |
1235 | S>I | No |
ClinGen gnomAD |
|
|
rs781751533 CA4342652 |
1236 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs371082830 CA4342651 |
1237 | D>A | No |
ClinGen ESP ExAC gnomAD |
|
|
CA368183304 rs1210713142 |
1238 | I>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs547209617 CA4342650 |
1238 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs780310469 CA4342649 |
1240 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs141933427 CA4342648 |
1241 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4342647 rs201492733 |
1242 | P>L | No |
ClinGen ESP ExAC gnomAD |
|
|
CA368183183 rs1348188725 |
1243 | N>K | No |
ClinGen gnomAD |
|
|
rs1316930103 CA368183179 |
1244 | N>D | No |
ClinGen gnomAD |
|
|
CA368183174 rs1338996171 |
1244 | N>S | No |
ClinGen gnomAD |
|
|
CA368183156 rs1382004596 |
1245 | E>* | No |
ClinGen gnomAD |
|
|
rs765379128 CA4342645 |
1245 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1245 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs753852959 CA4342643 |
1246 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA4342644 rs376485016 |
1246 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368183082 rs1398627129 |
1247 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
CA4342642 rs527257787 |
1248 | L>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1562774068 CA368183045 |
1249 | A>T | No |
ClinGen Ensembl |
|
|
CA161990036 rs980016258 |
1250 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1164670773 CA368182998 |
1251 | K>Q | No |
ClinGen gnomAD |
|
|
CA4342641 rs759361395 |
1253 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774306893 CA4342640 |
1254 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs766301292 CA4342639 |
1255 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368182859 rs1405843481 |
1255 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs561493201 CA161990009 |
1256 | Y>F | No |
ClinGen 1000Genomes |
|
|
rs946177477 CA161990008 |
1258 | T>I | No |
ClinGen TOPMed |
|
|
CA161989979 rs776273788 |
1263 | S>P | No |
ClinGen gnomAD |
|
| TCGA novel | 1263 | S>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs990278730 COSM1093093 CA161989974 |
1263 | S>Y | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA161989958 rs369488588 |
1266 | K>M | No |
ClinGen Ensembl |
|
|
rs769555827 CA368182565 |
1269 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA4342636 rs769555827 |
1269 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
| rs748414027 | 1271 | F>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV000911018 CA4342635 rs201873378 |
1271 | F>S | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
| rs748414027 | 1272 | D>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1312764025 CA368182458 |
1272 | D>V | No |
ClinGen gnomAD |
|
|
CA368182384 rs768168544 |
1274 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1383745177 CA368182376 |
1275 | F>Y | No |
ClinGen TOPMed |
|
|
rs780478950 CA4342629 |
1276 | V>D | No |
ClinGen ExAC gnomAD |
|
|
rs746230792 CA4342627 |
1283 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368182180 rs1170957713 |
1285 | K>* | No |
ClinGen gnomAD |
|
|
rs1584251963 CA368182170 |
1285 | K>R | No |
ClinGen Ensembl |
|
|
rs1429658438 CA368182162 |
1286 | Q>* | No |
ClinGen gnomAD |
|
|
rs1341453661 CA368182117 |
1288 | E>* | No |
ClinGen TOPMed |
|
|
rs989468116 CA161989878 |
1288 | E>D | No |
ClinGen Ensembl |
|
|
CA4342626 rs779168326 |
1289 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA161989860 rs779168326 |
1289 | E>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1289 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1479109813 CA368182066 |
1290 | A>T | No |
ClinGen gnomAD |
|
|
rs1490107074 CA368181967 |
1295 | K>N | No |
ClinGen gnomAD |
|
|
CA4342620 rs562819331 |
1296 | V>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4342621 rs768318837 |
1296 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368181952 rs1243383645 |
1297 | A>P | No |
ClinGen TOPMed |
|
| TCGA novel | 1299 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1308059803 CA368181922 |
1299 | Y>H | No |
ClinGen gnomAD |
|
|
rs1271643942 CA368181863 |
1302 | K>N | No |
ClinGen gnomAD |
|
|
rs1212356791 CA368181854 |
1303 | Y>F | No |
ClinGen gnomAD |
|
|
CA368181858 rs1207677487 |
1303 | Y>H | No |
ClinGen gnomAD |
|
|
rs762899305 CA4342619 |
1306 | I>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1306 | I>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4342618 rs374998533 |
1307 | F>L | No |
ClinGen ESP ExAC gnomAD |
|
|
CA368181759 rs1343979935 |
1308 | C>F | No |
ClinGen gnomAD |
|
|
rs765018539 CA4342617 |
1312 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA161989802 rs765018539 |
1312 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1374287516 CA368181689 |
1312 | E>K | No |
ClinGen TOPMed |
|
|
rs761400623 CA4342616 |
1313 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368181549 rs1584251847 |
1320 | G>R | No |
ClinGen Ensembl |
|
|
rs768062562 CA4342614 |
1321 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs746463339 CA4342613 |
1323 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA4342612 rs776046152 |
1324 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs1400144334 CA368181443 |
1326 | P>S | No |
ClinGen TOPMed |
|
|
CA4342611 rs772557935 |
1330 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA368181312 rs1562773888 |
1332 | C>R | No |
ClinGen Ensembl |
|
|
COSM1093090 rs141248575 CA4342610 |
1334 | R>I | endometrium [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA368181206 rs1339027871 |
1336 | L>P | No |
ClinGen TOPMed |
|
|
rs779219130 CA4342609 |
1337 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779219130 CA368181187 |
1337 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1266481103 CA368181198 |
1337 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs771288483 CA368181168 |
1338 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4342608 rs771288483 |
1338 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368181062 rs1250745739 |
1343 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1252475158 CA368181043 |
1344 | F>L | No |
ClinGen Ensembl |
|
|
CA368180962 rs749496405 |
1347 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA4342607 rs749496405 |
1347 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs376068011 CA4342606 |
1355 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV000916845 RCV003151218 rs202023980 CA4342605 |
1356 | E>G | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1222464630 CA368180755 |
1357 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA368180738 rs1321027902 |
1358 | A>T | No |
ClinGen gnomAD |
|
| TCGA novel | 1359 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368180698 rs1205348425 |
1361 | T>S | No |
ClinGen TOPMed |
|
|
rs752806986 CA4342604 |
1362 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA4342603 rs780189191 |
1363 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA161989751 rs896918681 |
1365 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA4342602 rs577145375 |
1365 | I>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs750342178 CA4342601 |
1366 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs761608598 CA4342599 |
1367 | N>S | No |
ClinGen ExAC gnomAD |
|
|
RCV001818234 CA4342597 RCV000899567 rs138600971 COSM106735 |
1368 | E>K | skin [Cosmic] | No |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs760164618 CA4342596 |
1369 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs779349886 RCV001945322 |
1370 | T>missing | No |
ClinVar dbSNP |
|
|
COSM3833490 CA4342595 rs774962440 |
1370 | T>A | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA4342594 rs772607200 |
1370 | T>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1376 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 1377 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 1382 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368180433 rs1355457231 |
1383 | K>E | No |
ClinGen gnomAD |
|
| TCGA novel | 1384 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368180364 rs1305344933 |
1388 | F>C | No |
ClinGen gnomAD |
|
|
rs375558119 CA4342589 |
1388 | F>L | No |
ClinGen ESP ExAC |
|
|
CA4342587 rs369780909 |
1389 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368180359 rs1170410823 |
1389 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1450617467 CA368180281 |
1395 | L>F | No |
ClinGen gnomAD |
|
|
rs201179431 CA161989629 |
1397 | C>R | No |
ClinGen 1000Genomes |
|
|
rs1382855037 CA368180247 |
1398 | I>F | No |
ClinGen TOPMed |
|
|
CA368180235 rs1297597610 |
1399 | Q>* | No |
ClinGen TOPMed |
|
|
rs748277849 CA4342584 |
1399 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA4342583 rs781448421 |
1400 | P>H | No |
ClinGen ExAC gnomAD |
|
|
RCV000998839 rs1584251663 CA368180226 |
1400 | P>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1156660931 CA368180209 |
1401 | T>I | No |
ClinGen gnomAD |
|
|
CA368180205 rs1225265070 |
1402 | S>P | No |
ClinGen TOPMed |
|
|
CA161989571 rs907466250 |
1403 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA368180152 rs1311368609 |
1406 | K>N | No |
ClinGen TOPMed |
|
|
CA368180143 rs1182426012 |
1407 | P>L | No |
ClinGen gnomAD |
|
|
rs1421477770 CA368180139 |
1408 | V>F | No |
ClinGen gnomAD |
|
| TCGA novel | 1409 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368180085 rs1387806354 |
1412 | K>N | No |
ClinGen gnomAD |
|
| TCGA novel | 1413 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4342581 rs750395585 |
1414 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA368180053 rs1205307873 |
1415 | L>V | No |
ClinGen gnomAD |
|
|
CA368180044 COSM1093088 rs1584251629 |
1416 | R>* | large_intestine endometrium breast [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA4342580 rs778841567 |
1416 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 1419 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1259301181 CA368179999 |
1420 | Q>E | No |
ClinGen gnomAD |
|
|
CA4342579 rs757068675 |
1421 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs753657052 CA4342578 |
1422 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763706544 CA4342577 |
1423 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4342576 rs760347799 |
1424 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs767036832 CA4342574 |
1426 | Y>D | No |
ClinGen ExAC gnomAD |
|
|
rs767036832 CA4342575 |
1426 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs1296412011 CA368179902 |
1427 | Q>R | No |
ClinGen gnomAD |
|
|
rs758989973 CA4342573 |
1429 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs774845704 CA4342572 |
1431 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs948631866 CA161989480 |
1433 | F>L | No |
ClinGen Ensembl |
|
|
CA368179690 rs1426433587 |
1436 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs773595084 CA4342568 |
1437 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs770014195 CA4342567 |
1439 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368179618 rs1179738515 |
1440 | W>R | No |
ClinGen TOPMed gnomAD |
|
|
CA161989427 rs552576227 |
1441 | P>T | No |
ClinGen gnomAD |
|
|
rs1260666311 CA368179547 |
1443 | N>S | No |
ClinGen gnomAD |
|
|
CA368179542 rs1490596001 |
1444 | Q>K | No |
ClinGen gnomAD |
|
| TCGA novel | 1448 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs914472275 CA161989419 |
1449 | H>R | No |
ClinGen Ensembl |
|
|
CA4342562 rs747079757 |
1453 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs768858360 CA4342563 |
1453 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778776035 CA4342561 |
1456 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA368179230 rs1226870919 |
1456 | Y>D | No |
ClinGen TOPMed gnomAD |
|
|
CA368179231 rs1226870919 |
1456 | Y>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA368179210 rs1285365179 |
1457 | A>S | No |
ClinGen gnomAD |
|
|
CA4342560 rs372311066 |
1459 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368179136 rs1302370214 |
1462 | N>S | No |
ClinGen gnomAD |
|
|
rs935789587 CA161989402 |
1463 | S>P | No |
ClinGen TOPMed |
|
|
CA368179119 rs1398631669 COSM1093086 |
1463 | S>Y | oesophagus endometrium Variant assessed as Somatic; 4.625e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA4342558 COSM747531 rs777659284 |
1464 | F>L | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
COSM747531 rs1460994810 CA368179102 |
1464 | F>L | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA161989375 rs978197631 CA368178956 |
1471 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
CA161989380 rs866466388 |
1471 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
CA4342554 rs754538109 |
1472 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs767093575 CA4342555 |
1472 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4342553 rs145665736 |
1473 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA4342552 rs766831754 |
1473 | R>H | Variant assessed as Somatic; 4.627e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1029597437 CA161989353 |
1477 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1426658202 CA368178848 |
1480 | Y>C | No |
ClinGen TOPMed |
|
|
rs773543514 CA4342550 |
1480 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs576323214 CA4342548 |
1484 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA368178715 rs1390777495 |
1486 | G>R | No |
ClinGen gnomAD |
|
|
rs770613148 CA161989345 |
1487 | K>E | No |
ClinGen Ensembl |
|
|
rs556478940 CA4342547 |
1487 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 1488 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 1488 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368178670 rs1178024491 |
1488 | R>T | No |
ClinGen gnomAD |
|
| TCGA novel | 1490 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs112101846 CA161989323 |
1492 | L>R | No |
ClinGen Ensembl |
|
|
CA368178546 rs1171170751 |
1494 | H>Q | No |
ClinGen gnomAD |
|
|
rs1428248221 CA368178569 |
1494 | H>Y | No |
ClinGen gnomAD |
|
|
CA368178497 rs1471327817 |
1496 | G>A | No |
ClinGen gnomAD |
|
| TCGA novel | 1498 | I>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs775609244 CA4342544 |
1499 | D>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs747136998 CA4342545 |
1499 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA368178456 rs775609244 |
1499 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4342543 rs376666275 |
1504 | K>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4342542 rs749274318 |
1505 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1204463780 CA368178300 |
1506 | P>A | No |
ClinGen gnomAD |
|
|
CA4342541 rs149043237 |
1506 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA161989254 rs149043237 |
1506 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs755910665 CA368178268 |
1507 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs755910665 CA4342540 |
1507 | D>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1507 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs754591162 CA4342537 |
1512 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs1424807533 CA368177909 |
1518 | W>* | No |
ClinGen gnomAD |
|
|
CA368177793 rs200178876 |
1520 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368177730 rs1384464613 |
1521 | E>G | No |
ClinGen TOPMed |
|
|
RCV001819087 CA4342535 RCV000968884 rs115350620 |
1521 | E>K | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1001506863 CA161989232 |
1522 | K>E | No |
ClinGen TOPMed |
|
|
CA4342534 rs757789319 |
1524 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA4342533 rs750944075 |
1524 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs765833713 CA4342532 |
1526 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA4342531 COSM257944 rs762323380 |
1529 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA4342529 rs570738604 |
1532 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA368177297 rs375396225 |
1533 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
| TCGA novel | 1533 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs761010661 CA4342528 |
1534 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA161989161 rs1044269550 |
1535 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs772210481 CA4342524 |
1538 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs759469955 CA4342523 |
1539 | L>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs554366252 CA4342522 |
1540 | Y>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4342521 rs769695602 |
1541 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1246626623 CA368176950 |
1544 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA4342520 rs772735644 |
1544 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4342519 rs780992178 |
1546 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA368176832 rs1432422181 |
1548 | K>N | No |
ClinGen gnomAD |
|
|
rs768387962 CA4342518 |
1549 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
| rs761819522 | 1549 | I>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs768387962 CA368176810 |
1549 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368176728 COSM1093083 rs1367856817 |
1551 | I>M | endometrium [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs140323585 CA161989083 |
1551 | I>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA |
|
CA368176706 rs1164733782 |
1552 | P>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA368176720 rs1223109287 |
1552 | P>S | No |
ClinGen gnomAD |
|
|
rs146732631 CA4342515 |
1553 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs746687981 CA4342516 |
1553 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV001818947 rs34896991 RCV000948780 CA4342513 |
1556 | A>T | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA4342510 rs150862618 TCGA novel RCV000884658 |
1558 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD NCI-TCGA |
|
CA4342509 rs142271975 |
1560 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 1571 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1188289738 CA368176013 |
1572 | F>L | No |
ClinGen TOPMed |
|
|
rs148724199 RCV001817071 RCV000881468 CA4342506 |
1575 | G>E | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
RCV001305344 rs148724199 |
1575 | G>V | No |
ClinVar dbSNP |
|
|
CA4342505 rs373623328 |
1577 | S>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
RCV000948779 rs144380633 CA4342504 RCV001818946 |
1578 | I>T | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs761757618 CA4342502 |
1579 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs1333123884 CA368175737 |
1580 | G>D | No |
ClinGen TOPMed |
|
|
CA4342501 rs776490364 |
1580 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4342500 rs768443589 |
1581 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs746774992 CA4342499 |
1582 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs779813128 CA4342498 |
1583 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA4342497 rs771600651 |
1583 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs745425438 CA4342496 |
1584 | Y>D | No |
ClinGen ExAC gnomAD |
|
|
rs144109966 CA4342495 |
1587 | E>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA368175350 rs1432292521 |
1589 | V>A | No |
ClinGen TOPMed |
|
|
rs1455031791 CA576706765 |
1590 | V>= | No |
ClinGen gnomAD |
3 associated diseases with Q5K651
[MIM: 610455]: Tumoral calcinosis, normophosphatemic, familial (NFTC)
An uncommon, life-threatening disorder characterized by progressive deposition of calcified masses in cutaneous and subcutaneous tissues. Serum phosphate levels are normal. Clinical features include painful calcified ulcerative lesions and massive calcium deposition in the mid- and lower dermis, severe skin and bone infections, erythematous papular skin eruption in infancy, conjunctivitis, and gingivitis. NFTC shows a striking resemblance to acquired dystrophic calcinosis, in which tissue calcification occurs as a consequence of tissue injury/inflammation. {ECO:0000269|PubMed:16960814, ECO:0000269|PubMed:18094730}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 617053]: MIRAGE syndrome (MIRAGE)
A form of syndromic adrenal hypoplasia characterized by myelodysplasia, infection, restriction of growth, adrenal hypoplasia, genital phenotypes, and enteropathy. {ECO:0000269|PubMed:27182967}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 619041]: Monosomy 7 myelodysplasia and leukemia syndrome 2 (M7MLS2)
A hematologic disorder manifesting in early childhood and characterized by bone marrow dyspoiesis, pancytopenia, myelodysplastic syndrome or acute myelogenous leukemia, associated with monosomy 7 in the bone marrow. Disease severity is highly variable. Inheritance is autosomal dominant with incomplete penetrance. {ECO:0000269|PubMed:30046003}. Note=The disease is caused by variants affecting the gene represented in this entry. Germline mutations in SAMD9 with a suppressive effect on the cell cycle are associated with somatic loss of the chromosome 7 harboring the mutant allele. This results in the deletion of several genes and predisposes to the development of myelodysplastic syndrome and acute myelogenous leukemia. {ECO:0000269|PubMed:30046003}.
Without disease ID
- An uncommon, life-threatening disorder characterized by progressive deposition of calcified masses in cutaneous and subcutaneous tissues. Serum phosphate levels are normal. Clinical features include painful calcified ulcerative lesions and massive calcium deposition in the mid- and lower dermis, severe skin and bone infections, erythematous papular skin eruption in infancy, conjunctivitis, and gingivitis. NFTC shows a striking resemblance to acquired dystrophic calcinosis, in which tissue calcification occurs as a consequence of tissue injury/inflammation. {ECO:0000269|PubMed:16960814, ECO:0000269|PubMed:18094730}. Note=The disease is caused by variants affecting the gene represented in this entry.
- A form of syndromic adrenal hypoplasia characterized by myelodysplasia, infection, restriction of growth, adrenal hypoplasia, genital phenotypes, and enteropathy. {ECO:0000269|PubMed:27182967}. Note=The disease is caused by variants affecting the gene represented in this entry.
- A hematologic disorder manifesting in early childhood and characterized by bone marrow dyspoiesis, pancytopenia, myelodysplastic syndrome or acute myelogenous leukemia, associated with monosomy 7 in the bone marrow. Disease severity is highly variable. Inheritance is autosomal dominant with incomplete penetrance. {ECO:0000269|PubMed:30046003}. Note=The disease is caused by variants affecting the gene represented in this entry. Germline mutations in SAMD9 with a suppressive effect on the cell cycle are associated with somatic loss of the chromosome 7 harboring the mutant allele. This results in the deletion of several genes and predisposes to the development of myelodysplastic syndrome and acute myelogenous leukemia. {ECO:0000269|PubMed:30046003}.
1 regional properties for Q5K651
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Sterile alpha motif domain | 11 - 77 | IPR001660 |
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| intracellular membrane-bounded organelle | Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| endosomal vesicle fusion | The homotypic fusion of endocytic vesicles to form or add to an early endosome. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAKQLNLPEN | TDDWTKEDVN | QWLESHKIDQ | KHREILTEQD | VNGAVLKWLK | KEHLVDMGIT |
| 70 | 80 | 90 | 100 | 110 | 120 |
| HGPAIQIEEL | FKELRKTAIE | DSIQTSKMGK | PSKNAPKDQT | VSQKERRETS | KQKQKGKENP |
| 130 | 140 | 150 | 160 | 170 | 180 |
| DMANPSAMST | TAKGSKSLKV | ELIEDKIDYT | KERQPSIDLT | CVSYPFDEFS | NPYRYKLDFS |
| 190 | 200 | 210 | 220 | 230 | 240 |
| LQPETGPGNL | IDPIHEFKAF | TNTATATEED | VKMKFSNEVF | RFASACMNSR | TNGTIHFGVK |
| 250 | 260 | 270 | 280 | 290 | 300 |
| DKPHGKIVGI | KVTNDTKEAL | INHFNLMINK | YFEDHQVQQA | KKCIREPRFV | EVLLPNSTLS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| DRFVIEVDII | PQFSECQYDY | FQIKMQNYNN | KIWEQSKKFS | LFVRDGTSSK | DITKNKVDFR |
| 370 | 380 | 390 | 400 | 410 | 420 |
| AFKADFKTLA | ESRKAAEEKF | RAKTNKKERE | GPKLVKLLTG | NQDLLDNSYY | EQYILVTNKC |
| 430 | 440 | 450 | 460 | 470 | 480 |
| HPDQTKHLDF | LKEIKWFAVL | EFDPESNING | VVKAYKESRV | ANLHFPSVYV | EQKTTPNETI |
| 490 | 500 | 510 | 520 | 530 | 540 |
| STLNLYHQPS | WIFCNGRLDL | DSEKYKPFDP | SSWQRERASD | VRKLISFLTH | EDIMPRGKFL |
| 550 | 560 | 570 | 580 | 590 | 600 |
| VVFLLLSSVD | DPRDPLIETF | CAFYQDLKGM | ENILCICVHP | HIFQGWKDLL | EARLIKHQDE |
| 610 | 620 | 630 | 640 | 650 | 660 |
| ISSQCISALS | LEEINGTILK | LKSVTQSSKR | LLPSIGLSTV | LLKKEEDIMT | ALEIICENEC |
| 670 | 680 | 690 | 700 | 710 | 720 |
| EGTLLEKDKN | KFLEFKASKE | EDFYRGGKVS | WWNFYFSSES | YSSPFVKRDK | YERLEAMIQN |
| 730 | 740 | 750 | 760 | 770 | 780 |
| CADSSKPTST | KIIHLYHHPG | CGGTTLAMHI | LWELRKKFRC | AVLKNKTVDF | SEIGEQVTSL |
| 790 | 800 | 810 | 820 | 830 | 840 |
| ITYGAMNRQE | YVPVLLLVDD | FEEQDNVYLL | QYSIQTAIAK | KYIRYEKPLV | IILNCMRSQN |
| 850 | 860 | 870 | 880 | 890 | 900 |
| PEKSARIPDS | IAVIQQLSPK | EQRAFELKLK | EIKEQHKNFE | DFYSFMIMKT | NFNKEYIENV |
| 910 | 920 | 930 | 940 | 950 | 960 |
| VRNILKGQNI | FTKEAKLFSF | LALLNSYVPD | TTISLSQCEK | FLGIGNKKAF | WGTEKFEDKM |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| GTYSTILIKT | EVIECGNYCG | VRIIHSLIAE | FSLEELKKSY | HLNKSQIMLD | MLTENLFFDT |
| 1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
| GMGKSKFLQD | MHTLLLTRHR | DEHEGETGNW | FSPFIEALHK | DEGNEAVEAV | LLESIHRFNP |
| 1090 | 1100 | 1110 | 1120 | 1130 | 1140 |
| NAFICQALAR | HFYIKKKDFG | NALNWAKQAK | IIEPDNSYIS | DTLGQVYKSK | IRWWIEENGG |
| 1150 | 1160 | 1170 | 1180 | 1190 | 1200 |
| NGNISVDDLI | ALLDLAEHAS | SAFKESQQQS | EDREYEVKER | LYPKSKRRYD | TYNIAGYQGE |
| 1210 | 1220 | 1230 | 1240 | 1250 | 1260 |
| IEVGLYTIQI | LQLIPFFDNK | NELSKRYMVN | FVSGSSDIPG | DPNNEYKLAL | KNYIPYLTKL |
| 1270 | 1280 | 1290 | 1300 | 1310 | 1320 |
| KFSLKKSFDF | FDEYFVLLKP | RNNIKQNEEA | KTRRKVAGYF | KKYVDIFCLL | EESQNNTGLG |
| 1330 | 1340 | 1350 | 1360 | 1370 | 1380 |
| SKFSEPLQVE | RCRRNLVALK | ADKFSGLLEY | LIKSQEDAIS | TMKCIVNEYT | FLLEQCTVKI |
| 1390 | 1400 | 1410 | 1420 | 1430 | 1440 |
| QSKEKLNFIL | ANIILSCIQP | TSRLVKPVEK | LKDQLREVLQ | PIGLTYQFSE | PYFLASLLFW |
| 1450 | 1460 | 1470 | 1480 | 1490 | 1500 |
| PENQQLDQHS | EQMKEYAQAL | KNSFKGQYKH | MHRTKQPIAY | FFLGKGKRLE | RLVHKGKIDQ |
| 1510 | 1520 | 1530 | 1540 | 1550 | 1560 |
| CFKKTPDINS | LWQSGDVWKE | EKVQELLLRL | QGRAENNCLY | IEYGINEKIT | IPITPAFLGQ |
| 1570 | 1580 | ||||
| LRSGRSIEKV | SFYLGFSIGG | PLAYDIEIV |