Q5JSH3
Gene name |
WDR44 (RPH11) |
Protein name |
WD repeat-containing protein 44 |
Names |
Rabphilin-11 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:54521 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q5JSH3
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q5JSH3-F1 | Predicted | AlphaFoldDB |
344 variants for Q5JSH3
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1396350175 CA414350460 |
5 | S>R | No |
ClinGen gnomAD |
|
| TCGA novel | 6 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 10 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10498129 rs773097739 |
11 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA10498130 rs199580855 |
13 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs140525614 CA334902716 |
14 | P>R | No |
ClinGen ESP |
|
|
rs1321947190 CA414350536 |
16 | D>V | No |
ClinGen gnomAD |
|
|
CA10498131 rs771040885 |
18 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10498133 rs762807889 |
20 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA10498136 rs766875912 |
21 | G>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1421218158 CA414350565 |
21 | G>S | No |
ClinGen TOPMed |
|
|
CA10498137 rs767206778 |
24 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs187698818 CA414350588 |
25 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs187698818 CA10498138 |
25 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 27 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs761901843 CA10498154 |
30 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA414353072 rs1274687438 |
32 | G>R | No |
ClinGen gnomAD |
|
|
CA414353092 rs1207605930 |
35 | T>A | No |
ClinGen gnomAD |
|
|
CA10498155 rs771882824 |
35 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs772821048 CA10498156 |
36 | F>C | No |
ClinGen ExAC gnomAD |
|
|
CA414353380 rs1384700442 |
42 | T>A | No |
ClinGen gnomAD |
|
|
CA10498196 rs749474426 |
43 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs777555221 CA10498198 |
44 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10498197 rs758140909 |
44 | Y>H | No |
ClinGen ExAC |
|
|
rs1273134607 CA414353401 |
45 | K>R | No |
ClinGen gnomAD |
|
|
rs746985534 CA10498199 |
46 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA10498200 rs770887876 |
48 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA414353439 rs1487194267 |
51 | P>S | No |
ClinGen TOPMed |
|
|
rs1264369850 CA414353453 |
53 | Q>R | No |
ClinGen TOPMed |
|
|
CA414353466 rs1268241232 |
55 | L>V | No |
ClinGen gnomAD |
|
|
CA10498218 rs757178885 |
66 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs745754847 CA10498220 |
69 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10498221 rs141485861 |
69 | E>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA414353694 rs1418174125 |
71 | S>G | No |
ClinGen gnomAD |
|
|
rs1462673566 CA414353713 |
72 | Q>R | No |
ClinGen gnomAD |
|
|
rs1368490688 CA414353735 |
74 | V>I | No |
ClinGen TOPMed |
|
|
CA414353791 rs1458566475 |
78 | E>D | No |
ClinGen gnomAD |
|
|
CA10498222 rs779537868 |
78 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1387278258 CA414353825 |
81 | S>F | No |
ClinGen gnomAD |
|
|
rs748955725 CA10498223 |
81 | S>T | No |
ClinGen ExAC |
|
|
CA10498224 rs768336272 |
82 | L>W | No |
ClinGen ExAC gnomAD |
|
|
CA414353869 rs1167815349 |
84 | S>C | No |
ClinGen TOPMed |
|
|
rs866586082 CA334906167 |
86 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
| TCGA novel | 88 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA414353922 rs1449988103 |
89 | L>F | No |
ClinGen TOPMed |
|
|
rs774619720 CA10498225 |
91 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA334906168 rs567760627 |
92 | Q>R | No |
ClinGen Ensembl |
|
|
CA414353998 rs1320986061 |
96 | S>N | No |
ClinGen gnomAD |
|
|
rs762270461 CA10498226 |
98 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs762270461 CA10498227 |
98 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA414354033 rs1294264947 |
99 | V>A | No |
ClinGen gnomAD |
|
|
rs1337293627 CA414354035 |
100 | A>T | No |
ClinGen gnomAD |
|
|
CA10498229 rs202158742 |
101 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs766631410 CA10498230 |
102 | T>K | No |
ClinGen ExAC gnomAD |
|
|
rs753940089 CA10498232 |
103 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA10498231 rs753940089 |
103 | D>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 104 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM248322 CA10498234 rs752818626 |
106 | N>S | prostate [Cosmic] | No |
ClinGen cosmic curated ExAC |
|
rs1482219271 CA414354108 |
107 | I>L | No |
ClinGen gnomAD |
|
|
CA10498235 rs757063033 |
108 | P>T | No |
ClinGen ExAC |
|
| TCGA novel | 109 | G>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs750429631 CA10498237 |
109 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA10498239 rs150373422 |
113 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA414354173 rs1201259367 |
113 | I>T | No |
ClinGen TOPMed |
|
|
CA414354183 rs1400807730 |
114 | D>G | No |
ClinGen gnomAD |
|
|
rs748805428 CA10498240 |
114 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA414354192 rs1227265568 |
115 | Q>E | No |
ClinGen gnomAD |
|
|
CA10498241 rs768011626 |
116 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA334906169 rs975266031 |
118 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs747700108 CA10498243 |
118 | P>S | No |
ClinGen ExAC TOPMed |
|
|
CA10498245 rs773704871 |
119 | E>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 121 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 125 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA414354305 rs1330775708 |
125 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs761321691 CA10498246 |
126 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771542506 CA10498247 |
132 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA10498248 rs776610227 |
133 | T>S | No |
ClinGen ExAC TOPMed |
|
| TCGA novel | 134 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs759689777 CA10498249 |
135 | L>S | No |
ClinGen ExAC gnomAD |
|
|
rs921064575 CA334906170 |
136 | E>K | No |
ClinGen Ensembl |
|
|
rs752974525 CA10498251 |
137 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA414354519 rs1280881386 |
142 | P>L | No |
ClinGen gnomAD |
|
|
rs763160154 CA10498252 |
142 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA334906171 rs767361495 |
143 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA414354520 rs767361495 |
143 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10498253 rs767361495 |
143 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA414354560 rs1569367428 |
147 | C>G | No |
ClinGen Ensembl |
|
| TCGA novel | 148 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10498255 rs756089435 |
148 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA414354598 rs1367969075 |
152 | D>G | No |
ClinGen TOPMed |
|
|
rs1456405626 CA414354593 |
152 | D>N | No |
ClinGen TOPMed |
|
|
rs149132357 CA10498257 |
155 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA414354625 rs1413340278 |
156 | K>R | No |
ClinGen gnomAD |
|
|
rs370326081 CA10498259 |
167 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA334906172 rs776230363 |
171 | T>I | No |
ClinGen Ensembl |
|
|
CA10498260 rs747874632 |
172 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA10498262 rs778329364 |
175 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs373487766 CA10498263 |
180 | A>T | No |
ClinGen ESP ExAC TOPMed |
|
|
CA414354875 rs1265512056 |
181 | V>A | No |
ClinGen TOPMed |
|
|
CA10498265 rs777214543 |
183 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA414354907 rs1409947705 |
184 | K>R | No |
ClinGen gnomAD |
|
|
CA414354924 rs1235044498 |
186 | G>R | No |
ClinGen gnomAD |
|
|
CA414354923 rs1235044498 |
186 | G>S | No |
ClinGen gnomAD |
|
|
rs746300561 CA10498266 |
188 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA10498267 rs769919250 |
189 | V>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 190 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA414355009 rs1569367523 |
194 | S>T | No |
ClinGen Ensembl |
|
|
rs1160168210 CA414355034 |
196 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA10498272 rs764273995 |
198 | L>S | No |
ClinGen ExAC gnomAD |
|
|
CA334906173 rs904597472 |
198 | L>V | No |
ClinGen gnomAD |
|
|
rs758916588 CA334906174 |
200 | T>A | No |
ClinGen Ensembl |
|
|
CA414355079 rs1193668900 |
200 | T>S | No |
ClinGen gnomAD |
|
|
CA10498273 rs764990008 |
202 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753819771 COSM73279 CA10498276 |
205 | A>T | ovary Variant assessed as Somatic; 0.0 impact. breast [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA414355151 rs1602914226 |
207 | E>K | No |
ClinGen Ensembl |
|
|
CA414355166 rs1295163832 |
208 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA10498278 rs764858264 |
209 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA334906175 rs894626185 |
209 | V>M | No |
ClinGen TOPMed |
|
|
rs1321848190 CA414355194 |
210 | A>V | No |
ClinGen gnomAD |
|
|
CA10498280 rs758164953 |
211 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA414355225 rs1305632877 |
213 | K>R | No |
ClinGen gnomAD |
|
| TCGA novel | 215 | P>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 216 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA414355284 rs1473092507 |
218 | L>H | No |
ClinGen TOPMed |
|
|
rs1339845282 CA414355355 |
224 | I>T | No |
ClinGen gnomAD |
|
|
rs370691061 CA10498284 |
224 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs746447068 CA10498287 |
227 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs770182290 CA10498288 |
227 | S>R | No |
ClinGen ExAC |
|
|
CA10498289 rs775590348 |
228 | T>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 230 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1254319200 CA414355424 |
231 | P>T | No |
ClinGen gnomAD |
|
|
rs866057234 CA334906176 |
232 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs774569935 CA10498292 |
237 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs761957838 CA10498293 |
238 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA10498294 rs766265137 |
239 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs1267694931 CA414355515 |
241 | N>D | No |
ClinGen gnomAD |
|
| TCGA novel | 245 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs556748546 CA334906177 |
245 | P>S | No |
ClinGen Ensembl |
|
| TCGA novel | 247 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 252 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA414355649 rs1268711042 |
252 | R>Q | No |
ClinGen TOPMed |
|
|
CA414355677 rs1214965973 |
255 | P>S | No |
ClinGen TOPMed |
|
|
CA10498296 rs759565376 |
257 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA334906178 rs1055037015 |
258 | R>G | No |
ClinGen TOPMed |
|
|
COSM1113620 rs765052616 CA10498297 |
263 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 267 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs752642157 CA10498298 |
267 | E>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 273 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs763636506 CA10498300 |
274 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763762920 CA10498324 |
277 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs775259221 CA10498325 |
278 | K>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs767107741 CA10498327 |
283 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA10498329 rs756453546 |
284 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs139405235 CA10498328 |
284 | D>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1199245745 CA414356061 |
285 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA334906245 rs915994207 |
287 | L>P | No |
ClinGen Ensembl |
|
|
CA414356077 rs1486214725 |
288 | T>N | No |
ClinGen gnomAD |
|
|
rs17271416 CA10498332 VAR_029538 |
289 | A>T | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1602916497 CA414356093 |
291 | M>V | No |
ClinGen Ensembl |
|
|
VAR_029539 CA334906246 rs17855531 |
296 | T>A | No |
ClinGen UniProt Ensembl dbSNP |
|
|
rs779010583 CA10498333 |
296 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772147191 CA10498335 |
297 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs868694745 CA334906247 |
299 | D>N | No |
ClinGen gnomAD |
|
| TCGA novel | 313 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA414356364 rs1374724231 |
315 | I>T | No |
ClinGen gnomAD |
|
|
rs769714890 CA10498338 |
318 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750053318 CA10498345 |
320 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA414356570 rs887709737 |
324 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA334906326 rs887709737 |
324 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA414356590 rs1193046244 |
325 | P>L | No |
ClinGen gnomAD |
|
|
rs1394449617 CA414356629 |
328 | Q>R | No |
ClinGen gnomAD |
|
|
CA334906327 rs1015559175 |
329 | T>A | No |
ClinGen Ensembl |
|
|
CA10498346 rs760374300 |
330 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1175349573 CA414356690 |
333 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1183873795 CA414356755 |
336 | G>S | No |
ClinGen gnomAD |
|
|
rs754181976 CA10498348 |
337 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1298413172 CA414356886 |
342 | S>C | No |
ClinGen gnomAD |
|
|
CA10498350 rs765761577 |
343 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1475376687 CA414356914 |
344 | S>P | No |
ClinGen TOPMed |
|
|
rs371338318 CA10498351 |
348 | L>V | No |
ClinGen ESP ExAC |
|
|
rs1467251032 CA414357241 |
356 | S>R | No |
ClinGen gnomAD |
|
|
rs1394584522 CA414357251 |
356 | S>T | No |
ClinGen gnomAD |
|
|
rs1337024304 CA414357261 |
357 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA414357353 rs1602920820 RCV000851306 |
362 | L>P | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA414357383 rs1383933731 |
364 | T>N | No |
ClinGen gnomAD |
|
|
rs1016447030 CA334906445 |
378 | P>L | No |
ClinGen TOPMed |
|
|
CA414357660 rs1333043009 |
379 | T>I | No |
ClinGen gnomAD |
|
|
rs753149445 CA10498376 |
380 | G>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 383 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1337065310 CA414357763 |
385 | T>S | No |
ClinGen gnomAD |
|
| TCGA novel | 393 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10498379 rs751634252 |
395 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA334906536 rs5910348 |
397 | S>R | No |
ClinGen Ensembl |
|
|
CA10498393 COSM202060 rs149448936 |
400 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA10498394 rs763417168 |
400 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA10498396 rs752065653 |
412 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA10498397 rs758840789 |
413 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 425 | T>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs201848504 CA10498408 |
426 | T>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 431 | F>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 432 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10498409 rs745577218 |
437 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs201543643 CA334906940 |
443 | A>D | No |
ClinGen 1000Genomes |
|
| TCGA novel | 445 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1355295370 CA414360398 |
449 | R>H | No |
ClinGen gnomAD |
|
|
CA414360571 rs775756619 |
459 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10498430 rs779772268 |
464 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1467002083 CA414361700 |
465 | D>V | No |
ClinGen gnomAD |
|
|
CA10498431 rs748825272 |
490 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 494 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM754490 CA414362591 rs1326631223 CA414362589 |
499 | Q>H | Variant assessed as Somatic; impact. lung [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs143958905 CA10498432 |
501 | K>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 515 | W>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10498440 rs771366504 |
517 | M>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA10498441 rs140354850 COSM3747270 |
524 | R>Q | liver [Cosmic] | No |
ClinGen cosmic curated ESP ExAC gnomAD |
|
CA414363648 rs1447415858 |
526 | L>F | No |
ClinGen gnomAD |
|
| TCGA novel | 532 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA414363761 rs1398170516 |
533 | N>D | No |
ClinGen TOPMed |
|
|
CA414363811 rs1164957901 |
535 | V>L | No |
ClinGen gnomAD |
|
| TCGA novel | 542 | N>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM1465124 rs763934302 CA10498442 |
543 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs751332749 CA10498443 |
544 | F>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10498444 rs757224352 |
546 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA10498445 rs767472097 |
548 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1368860901 CA414364052 |
549 | N>Y | No |
ClinGen TOPMed |
|
|
rs750271651 CA10498446 |
551 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA414364148 rs1291787650 |
554 | Y>F | No |
ClinGen gnomAD |
|
|
CA10498465 rs765967381 |
559 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 559 | R>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs897017616 CA334907419 |
566 | Q>* | No |
ClinGen Ensembl |
|
|
CA334907420 rs907992982 |
567 | E>G | No |
ClinGen Ensembl |
|
|
rs1485834507 CA414365215 |
568 | S>G | No |
ClinGen gnomAD |
|
|
CA414365233 rs1217972132 |
570 | S>N | No |
ClinGen TOPMed |
|
|
CA414365412 rs1248212520 |
578 | T>R | No |
ClinGen gnomAD |
|
|
rs1182477305 CA414365428 |
579 | G>A | No |
ClinGen gnomAD |
|
|
rs771318894 CA10498473 |
580 | V>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10498472 rs747605797 |
580 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA414350624 rs1199510827 |
582 | S>G | No |
ClinGen gnomAD |
|
|
rs1302133350 CA414350633 |
583 | G>E | No |
ClinGen gnomAD |
|
|
CA334909182 rs918276078 |
584 | T>I | No |
ClinGen Ensembl |
|
|
CA334909183 rs952486201 |
585 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs967907151 CA334909184 |
587 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs967907151 CA414350657 |
587 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs769814047 CA10498476 |
588 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA10498478 rs763160039 |
593 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10498480 COSM1113636 rs772861179 |
596 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA10498479 COSM3843309 rs771913074 |
596 | R>W | breast [Cosmic] | No |
ClinGen cosmic curated ExAC |
|
CA414350726 rs1286630679 |
597 | Q>R | No |
ClinGen TOPMed |
|
|
rs1252500084 CA414350731 |
598 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA10498481 rs760711757 |
598 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs753763273 CA10498483 |
602 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA414350759 rs1322280795 |
602 | K>T | No |
ClinGen TOPMed |
|
|
CA414350829 rs1461804815 |
612 | D>G | No |
ClinGen gnomAD |
|
|
CA229173 RCV000087235 rs483352750 |
613 | L>F | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1217664662 CA414350904 |
621 | L>V | No |
ClinGen gnomAD |
|
| TCGA novel | 627 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781618243 CA10498510 |
628 | K>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 630 | V>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA414351015 rs1365055130 |
637 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1474439310 CA414351043 |
641 | L>F | No |
ClinGen gnomAD |
|
|
rs750988239 CA334909449 |
647 | I>K | No |
ClinGen ExAC gnomAD |
|
|
rs750988239 CA10498511 |
647 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA414351088 rs1569384709 |
647 | I>V | No |
ClinGen Ensembl |
|
|
rs1173449644 CA414351123 |
652 | A>V | No |
ClinGen TOPMed |
|
|
CA10498512 rs147833933 |
654 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1156283787 CA414351137 |
654 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 664 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 668 | L>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs763600773 CA10498525 |
671 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs914187798 CA334909803 |
672 | L>F | No |
ClinGen Ensembl |
|
|
CA414351278 rs1223630414 COSM1465128 |
673 | R>C | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA414351321 rs1360716391 |
679 | D>A | No |
ClinGen gnomAD |
|
| TCGA novel | 681 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| rs758728740 | 682 | V>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA414351421 rs1376168321 |
693 | K>E | No |
ClinGen gnomAD |
|
| TCGA novel | 702 | Q>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA414351521 rs1490943414 |
706 | Y>* | No |
ClinGen TOPMed |
|
| TCGA novel | 706 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 708 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 711 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 715 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10498529 rs779239726 |
716 | C>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA414351727 rs1470684277 |
734 | S>P | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 738 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA334909850 rs762363490 |
740 | K>R | No |
ClinGen Ensembl |
|
|
rs1368907226 CA414351773 |
741 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
| TCGA novel | 743 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10498540 rs781170620 |
755 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 756 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1388591868 CA414351898 |
757 | I>M | No |
ClinGen gnomAD |
|
|
CA10498549 rs772805374 |
758 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA414351945 rs1351815456 |
765 | R>G | No |
ClinGen gnomAD |
|
| TCGA novel | 765 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10498554 rs765277341 |
778 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1602980578 CA414352089 |
785 | N>S | No |
ClinGen Ensembl |
|
| TCGA novel | 788 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 789 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10498564 rs768607813 |
796 | H>R | No |
ClinGen ExAC gnomAD |
|
|
COSM1113646 rs761828789 CA10498565 |
802 | V>I | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs771516280 CA10498567 |
807 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1355489943 CA414352277 |
809 | Y>C | No |
ClinGen gnomAD |
|
|
rs1255267516 CA414352296 |
812 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA414352308 rs1442894786 |
813 | W>* | No |
ClinGen gnomAD |
|
|
CA414352314 rs1273187566 |
814 | S>N | No |
ClinGen gnomAD |
|
| TCGA novel | 815 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 824 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 827 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA414352439 rs1239227456 |
831 | D>E | No |
ClinGen gnomAD |
|
| TCGA novel | 832 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1437911201 CA414352488 COSM1113650 |
838 | A>S | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA414352516 rs1427821125 |
840 | N>S | No |
ClinGen gnomAD |
|
|
CA334909983 rs781387991 |
843 | V>I | No |
ClinGen gnomAD |
|
| TCGA novel | 844 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA414352557 rs1309740864 |
847 | I>V | No |
ClinGen TOPMed |
|
|
rs915467898 CA334909984 |
848 | F>C | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 851 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs373702506 CA10498580 |
855 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1197054134 CA414352614 |
855 | M>T | No |
ClinGen gnomAD |
|
|
rs1164092103 CA414352611 |
855 | M>V | No |
ClinGen TOPMed |
|
|
rs754681714 CA10498582 |
860 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1009343086 CA334909986 |
861 | Q>K | No |
ClinGen Ensembl |
|
|
CA10498583 rs778925774 |
863 | E>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 865 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM1490393 CA10498585 rs778556090 |
869 | E>K | breast [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
rs1378506093 CA414352715 |
870 | K>E | No |
ClinGen gnomAD |
|
|
rs201565837 CA10498586 |
872 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA10498587 rs746709223 |
874 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA414352750 rs1414098770 |
875 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA414352762 rs1331397024 |
876 | V>A | No |
ClinGen gnomAD |
|
| TCGA novel | 877 | L>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10498589 rs776106105 |
878 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA414352771 rs1332485915 |
878 | D>N | No |
ClinGen gnomAD |
|
| TCGA novel | 883 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA414352831 rs1329351894 |
885 | M>T | No |
ClinGen gnomAD |
|
|
CA414352851 rs1412365358 |
888 | D>H | No |
ClinGen TOPMed |
|
| TCGA novel | 894 | L>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 898 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 905 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10498618 rs749853141 |
907 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs769318221 CA10498619 |
908 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1113653 rs1602988853 CA414352997 |
909 | R>I | endometrium [Cosmic] | No |
ClinGen cosmic curated Ensembl |
| rs760556971 | 911 | N>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10498621 rs774951601 |
912 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs1326232719 CA414353017 |
912 | V>L | No |
ClinGen gnomAD |
No associated diseases with Q5JSH3
9 regional properties for Q5JSH3
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| repeat | WD40 repeat | 499 - 542 | IPR001680-1 |
| repeat | WD40 repeat | 596 - 636 | IPR001680-2 |
| repeat | WD40 repeat | 637 - 677 | IPR001680-3 |
| repeat | WD40 repeat | 678 - 720 | IPR001680-4 |
| repeat | WD40 repeat | 728 - 770 | IPR001680-5 |
| repeat | WD40 repeat | 773 - 814 | IPR001680-6 |
| repeat | G-protein beta WD-40 repeat | 526 - 540 | IPR020472-1 |
| repeat | G-protein beta WD-40 repeat | 621 - 635 | IPR020472-2 |
| repeat | G-protein beta WD-40 repeat | 663 - 677 | IPR020472-3 |
Functions
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| endosome membrane | The lipid bilayer surrounding an endosome. |
| Golgi apparatus | A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. |
| perinuclear region of cytoplasm | Cytoplasm situated near, or occurring around, the nucleus. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q8N157 | AHI1 | Jouberin | Homo sapiens (Human) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MASESDTEEF | YDAPEDVHLG | GGYPVGSPGK | VGLSTFKETE | NTAYKVGNES | PVQELKQDVS |
| 70 | 80 | 90 | 100 | 110 | 120 |
| KKIIESIIEE | SQKVLQLEDD | SLDSKGKELS | DQATASPIVA | RTDLSNIPGL | LAIDQVLPEE |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SQKAESQNTF | EETELELKKC | FPSDETCEKP | VDETTKLTQT | SSTEQLNVLE | TETEVLNKEA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| VEVKGGGDVL | EPVSSDSLST | KDFAAVEEVA | PAKPPRHLTP | EPDIVASTKK | PVPARPPPPT |
| 250 | 260 | 270 | 280 | 290 | 300 |
| NFPPPRPPPP | SRPAPPPRKR | KSELEFETLK | TPDIDVPKEN | ITSDSLLTAS | MASESTVKDS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| QPSLDLASAT | SGDKIVTAQE | NGKAPDGQTV | AGEVMGPQRP | RSNSGRELTD | EEILASVMIK |
| 370 | 380 | 390 | 400 | 410 | 420 |
| NLDTGEEIPL | SLAEEKLPTG | INPLTLHIMR | RTKEYVSNDA | AQSDDEEKLQ | SQPTDTDGGR |
| 430 | 440 | 450 | 460 | 470 | 480 |
| LKQKTTQLKK | FLGKSVKRAK | HLAEEYGERA | INKVKSVRDE | VFHTDQDDPS | SSDDEGMPYT |
| 490 | 500 | 510 | 520 | 530 | 540 |
| RPVKFKAAHG | FKGPYDFDQI | KVVQDLSGEH | MGAVWTMKFS | HCGRLLASAG | QDNVVRIWAL |
| 550 | 560 | 570 | 580 | 590 | 600 |
| KNAFDYFNNM | RMKYNTEGRV | SPSPSQESLS | SSKSDTDTGV | CSGTDEDPDD | KNAPFRQRPF |
| 610 | 620 | 630 | 640 | 650 | 660 |
| CKYKGHTADL | LDLSWSKNYF | LLSSSMDKTV | RLWHISRREC | LCCFQHIDFV | TAIAFHPRDD |
| 670 | 680 | 690 | 700 | 710 | 720 |
| RYFLSGSLDG | KLRLWNIPDK | KVALWNEVDG | QTKLITAANF | CQNGKYAVIG | TYDGRCIFYD |
| 730 | 740 | 750 | 760 | 770 | 780 |
| TEHLKYHTQI | HVRSTRGRNK | VGRKITGIEP | LPGENKILVT | SNDSRIRLYD | LRDLSLSMKY |
| 790 | 800 | 810 | 820 | 830 | 840 |
| KGYVNSSSQI | KASFSHDFTY | LVSGSEDKYV | YIWSTYHDLS | KFTSVRRDRN | DFWEGIKAHN |
| 850 | 860 | 870 | 880 | 890 | 900 |
| AVVTSAIFAP | NPSLMLSLDV | QSEKSEGNEK | SEDAEVLDAT | PSGIMKTDNT | EVLLSADFTG |
| 910 | |||||
| AIKVFVNKRK | NVS |