Q5JDH5

PR
Gene name
rps3
Protein name
30S ribosomal protein S3
Names
Species
Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1))
KEGG Pathway
tko:TK1536
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

159-209 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

4 structures for Q5JDH5

Entry ID Method Resolution Chain Position Source
6SKF EM 295 A Ac 1-209 PDB
6SKG EM 265 A Ac 1-209 PDB
6TH6 EM 255 A Ac 1-209 PDB
AF-Q5JDH5-F1 Predicted AlphaFoldDB

No variants for Q5JDH5

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q5JDH5

No associated diseases with Q5JDH5

3 regional properties for Q5JDH5

Type Name Position InterPro Accession
domain Ribosomal protein S3, C-terminal 99 - 182 IPR001351
domain K Homology domain, type 2 17 - 88 IPR004044
domain K Homology domain 38 - 104 IPR004087

Functions

Description
EC Number
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
cytosolic small ribosomal subunit The small subunit of a ribosome located in the cytosol.

2 GO annotations of molecular function

Name Definition
rRNA binding Binding to a ribosomal RNA.
structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.

1 GO annotations of biological process

Name Definition
translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MAIERYFIKE GVKEMLIDEF LEKELRRAGY GGLDIKKTPL GTKVTIFAAN PGYVIGRGGR
70 80 90 100 110 120
RIRELTRILE KQFGLENPQI EVEEIKNPYL NAKVQAVRLA QALERGIHFR RAAYSAIRAI
130 140 150 160 170 180
MRNGARGVEI RLSGKLTGER AKSVRFYQGY LAKVGNPAET LVSRGYAQAQ LKLGVIGVKV
190 200
SIMPPDAKLP DEIEIKEIVE EEVSANEAQ