Q5HP69
Gene name |
rpsA (SERP1044) |
Protein name |
30S ribosomal protein S1 |
Names |
|
Species |
Staphylococcus epidermidis (strain ATCC 35984 / RP62A) |
KEGG Pathway |
ser:SERP1044 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q5HP69
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q5HP69-F1 | Predicted | AlphaFoldDB |
No variants for Q5HP69
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q5HP69 | |||||
No associated diseases with Q5HP69
8 regional properties for Q5HP69
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | S1 domain | 14 - 90 | IPR003029-1 |
| domain | S1 domain | 107 - 173 | IPR003029-2 |
| domain | S1 domain | 191 - 262 | IPR003029-3 |
| domain | S1 domain | 276 - 348 | IPR003029-4 |
| domain | RNA-binding domain, S1 | 14 - 90 | IPR022967-1 |
| domain | RNA-binding domain, S1 | 106 - 173 | IPR022967-2 |
| domain | RNA-binding domain, S1 | 192 - 262 | IPR022967-3 |
| domain | RNA-binding domain, S1 | 277 - 348 | IPR022967-4 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| ribonucleoprotein complex | A macromolecular complex that contains both RNA and protein molecules. |
| ribosome | An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| RNA binding | Binding to an RNA molecule or a portion thereof. |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MTEEFNESMI | NDIKEGDKVT | GEVQQVEDKQ | VVVHINGGKF | NGIIPISQLS | THHIENPSEV |
| 70 | 80 | 90 | 100 | 110 | 120 |
| VKVGDEVEAY | VTKIEFDEEN | DTGAYILSKR | QLETEKSYEY | LQEKLDNDEV | IEAEVTEVVK |
| 130 | 140 | 150 | 160 | 170 | 180 |
| GGLVVDVGQR | GFVPASLIST | DFIEDFSVFD | GQTIRIKVEE | LDPENNRVIL | SRKAVEQLEN |
| 190 | 200 | 210 | 220 | 230 | 240 |
| DAKKASILDS | LNEGDVIDGK | VARLTNFGAF | IDIGGVDGLV | HVSELSHEHV | QTPEEVVSVG |
| 250 | 260 | 270 | 280 | 290 | 300 |
| EAVKVKVKSV | EKDSERISLS | IKDTLPTPFE | NIKGKFHEDD | VIEGTVVRLA | NFGAFVEIAP |
| 310 | 320 | 330 | 340 | 350 | 360 |
| SVQGLVHISE | IDHKHIGSPN | EVLEPGQQVN | VKILGIDEDN | ERISLSIKAT | LPKENVIESD |
| 370 | 380 | 390 | |||
| ASTTQSYLED | DNDEDKPTLG | DVFGDKFKDL | KF |