Q5BGP1
Gene name |
cwc22 (AN0289) |
Protein name |
Pre-mRNA-splicing factor cwc22 |
Names |
|
Species |
Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans) |
KEGG Pathway |
ani:AN0289.2 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q5BGP1
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q5BGP1-F1 | Predicted | AlphaFoldDB |
No variants for Q5BGP1
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q5BGP1 | |||||
No associated diseases with Q5BGP1
14 regional properties for Q5BGP1
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| repeat | HAT (Half-A-TPR) repeat | 45 - 77 | IPR003107-1 |
| repeat | HAT (Half-A-TPR) repeat | 89 - 121 | IPR003107-2 |
| repeat | HAT (Half-A-TPR) repeat | 123 - 157 | IPR003107-3 |
| repeat | HAT (Half-A-TPR) repeat | 189 - 228 | IPR003107-4 |
| repeat | HAT (Half-A-TPR) repeat | 233 - 266 | IPR003107-5 |
| repeat | HAT (Half-A-TPR) repeat | 268 - 303 | IPR003107-6 |
| repeat | HAT (Half-A-TPR) repeat | 364 - 402 | IPR003107-7 |
| repeat | HAT (Half-A-TPR) repeat | 404 - 440 | IPR003107-8 |
| repeat | HAT (Half-A-TPR) repeat | 494 - 526 | IPR003107-9 |
| repeat | HAT (Half-A-TPR) repeat | 528 - 562 | IPR003107-10 |
| repeat | HAT (Half-A-TPR) repeat | 567 - 601 | IPR003107-11 |
| repeat | HAT (Half-A-TPR) repeat | 639 - 673 | IPR003107-12 |
| repeat | HAT (Half-A-TPR) repeat | 675 - 709 | IPR003107-13 |
| domain | Suppressor of forked | 204 - 305 | IPR008847 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| catalytic step 2 spliceosome | A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs. |
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| RNA binding | Binding to an RNA molecule or a portion thereof. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| mRNA splicing, via spliceosome | The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSDSVVLQSA | VRVPTPPPGA | SYSPQPSGSR | KRSPPSRSPS | PNRRRSPPGD | TADADRDVPR |
| 70 | 80 | 90 | 100 | 110 | 120 |
| IDPERAIERE | RQLAERVRQY | EQQEAARKPL | TEEEKQAAAK | AEYEKLLNMR | SGGTYIPPAR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LRALQAQITD | KTSKEYQRMA | WEALKKSING | LINKVNVSNI | KYIVPELFGE | NLVRGRGLFC |
| 190 | 200 | 210 | 220 | 230 | 240 |
| RSIMKAQAAS | LPFTPIYAAM | AAIVNTKLPQ | VGELLLSRLI | IQFRKAFKRN | DKAVCISSTT |
| 250 | 260 | 270 | 280 | 290 | 300 |
| FIAHLCNQQV | VHEMLAAQIL | LLLLHKPTDD | SVEIAVGLTR | EVGQHLEEMS | GPIALAVFDQ |
| 310 | 320 | 330 | 340 | 350 | 360 |
| FRNILHEADI | DKRVQYMIEV | LFQVRKDRYK | DNPAIKEELD | LVEEEDQITH | RIGLDDEIET |
| 370 | 380 | 390 | 400 | 410 | 420 |
| QDGLNIFKYD | PQWEEHEEAY | KKLKAEILGE | GSDDEDESGE | DDESSDEESE | EERQMDIKDQ |
| 430 | 440 | 450 | 460 | 470 | 480 |
| SNTDLVNLRR | TIYLTIMSSI | DFEECCHKLM | KISLPAGLEP | ELPSMIIECC | SQERTYSKFY |
| 490 | 500 | 510 | 520 | 530 | 540 |
| GLIGERFAKI | NRLWSDLFEN | AFAKYYDTIH | RYETNRLRNI | ARFFGHMLST | DALGWHVLSV |
| 550 | 560 | 570 | 580 | 590 | 600 |
| IHLNEEETTS | SSRIFIKILF | QDLAEHLGLP | KLRERMTDEL | LRPSFEGLFP | TDNPRNTRFS |
| 610 | 620 | 630 | 640 | 650 | 660 |
| INYFTSIGFG | VLTEELREFL | KNMPKPEVPA | LPPARSPSVS | SRSSYSSRSR | SSSYSYSRSP |
| 670 | 680 | 690 | 700 | 710 | 720 |
| SYSRSPSRSR | SRRRSISRGR | SYSRSVSGSS | RRSYTRSSYT | PSRSRSPAPR | SRRRSVSYSR |
| 730 | 740 | 750 | 760 | 770 | 780 |
| SLSRSRSSPR | RTRRGRTDSR | SPPPRRSLSR | SVSRSLTPPR | RGGRARSYSR | SPSRSLSRSV |
| 790 | 800 | 810 | 820 | 830 | 840 |
| SPPPRRASAR | RRYSSESISP | PGRARRSIPG | SRSPRRPPPS | RRARNYSVSR | SPSPRYGRNQ |
| 850 | 860 | ||||
| RRRNSSPSRS | PSPPPRRRPR | SPSTPPRR |