Q54S79
Gene name |
wdr3 (DDB_G0282623) |
Protein name |
WD repeat-containing protein 3 homolog |
Names |
|
Species |
Dictyostelium discoideum (Slime mold) |
KEGG Pathway |
ddi:DDB_G0282623 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q54S79
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q54S79-F1 | Predicted | AlphaFoldDB |
No variants for Q54S79
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q54S79 | |||||
No associated diseases with Q54S79
14 regional properties for Q54S79
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| repeat | WD40 repeat | 46 - 130 | IPR001680-1 |
| repeat | WD40 repeat | 132 - 222 | IPR001680-2 |
| repeat | WD40 repeat | 276 - 315 | IPR001680-3 |
| repeat | WD40 repeat | 383 - 463 | IPR001680-4 |
| repeat | WD40 repeat | 466 - 507 | IPR001680-5 |
| repeat | WD40 repeat | 521 - 559 | IPR001680-6 |
| repeat | WD40 repeat | 562 - 685 | IPR001680-7 |
| domain | Small-subunit processome, Utp12 | 787 - 888 | IPR007148 |
| conserved_site | WD40 repeat, conserved site | 116 - 130 | IPR019775-1 |
| conserved_site | WD40 repeat, conserved site | 158 - 172 | IPR019775-2 |
| conserved_site | WD40 repeat, conserved site | 492 - 506 | IPR019775-3 |
| repeat | G-protein beta WD-40 repeat | 116 - 130 | IPR020472-1 |
| repeat | G-protein beta WD-40 repeat | 588 - 602 | IPR020472-2 |
| repeat | G-protein beta WD-40 repeat | 630 - 644 | IPR020472-3 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| Pwp2p-containing subcomplex of 90S preribosome | A protein complex that forms a subcomplex of the 90S preribosome and can interact directly with the 5' External Transcribed Spacer (ETS) of the full length pre-rRNA transcript. In S. cerevisiae, it sediments at 25-30 S and is composed of Pwp2p, Dip2p, Utp21p, Utp13p, Utp18p, and Utp6p. |
| small-subunit processome | A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| snoRNA binding | Binding to a small nucleolar RNA. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| maturation of SSU-rRNA | Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MVKAYLKFVQ | DKVFGLISTS | NSILDGSGKL | AITGCGERIS | IWDLRKQVLN | QSLYEEDIKA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| EVTNVCLSKD | GALLASGYSD | GSIRIWSMSD | YQLQAVFNGH | RGSVTTMTFN | RLGNILVSGS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| KDTEVIVWDI | ITESGLFRLR | GHRDQITSVK | LLERSNHLIT | SSKDGFIKIW | DTETQHCIQT |
| 190 | 200 | 210 | 220 | 230 | 240 |
| IVGHRNPIWG | IDVNPDETRL | CSCTSDNQIR | FWRIPSNERQ | REDGSGIEPK | FIVNTPINSA |
| 250 | 260 | 270 | 280 | 290 | 300 |
| VIIPDEINED | GSKKENSNNS | NNNDIDDLEI | ISEEEFAKYY | GSITVKAESV | SGVRFDPTNK |
| 310 | 320 | 330 | 340 | 350 | 360 |
| ILAVQSTGKF | VDLFKITHYD | TMKLEEISIV | EEMRHRQTIK | TSSKVRFFSF | GNDIKHWNKF |
| 370 | 380 | 390 | 400 | 410 | 420 |
| VITLAGNSLE | AYEIKEKEQG | GGAFEVSSTL | DQAGHRSDIR | SLSLSSNDQM | LVSTSSESVK |
| 430 | 440 | 450 | 460 | 470 | 480 |
| VWNMKSLSCI | RSIACDYGLC | TVFAPGNLHV | IVGTKTGTIE | VFELASAARV | ASIKAHEGSV |
| 490 | 500 | 510 | 520 | 530 | 540 |
| WSLVLTPDLR | GVTSGGADKL | VKFWDFELIA | SQENSKHKVL | NLSLTKTLKV | ESDVLALKYS |
| 550 | 560 | 570 | 580 | 590 | 600 |
| ADNKFLAVSL | LDNTVKIFYT | DTVKFHLSLY | GHKLPVMCLD | ISDDSTLIIT | GSADKNIKIW |
| 610 | 620 | 630 | 640 | 650 | 660 |
| GLDYGDCHKS | FFAHDDSIMQ | VSFIPSTHHF | ISASKDKRIK | YWDADKFEHI | QTIEAHHGEV |
| 670 | 680 | 690 | 700 | 710 | 720 |
| WSLAMGSVGD | FFISGSHDRS | IRIFNQTETP | IFVESDRQRE | MEQTWEATLE | DDTRMRTKEM |
| 730 | 740 | 750 | 760 | 770 | 780 |
| LEENAAAGKQ | TLETIMAGED | ILDAIELCVQ | EKFKIDEYEK | LLKTTKNQDE | IPLYQPNIIM |
| 790 | 800 | 810 | 820 | 830 | 840 |
| LGLSPSEYLW | NRINRIRPSD | LEEALRVLPF | SVMRTLFEYF | NLWVDQSGKS | VEFIFKCSFF |
| 850 | 860 | 870 | 880 | 890 | 900 |
| LIQTHQNQLS | VSTEFIPILQ | HLNTSIKNRL | QKERFTLGFN | RSALSFVKRE | IEINQQYKFF |
| 910 | 920 | 930 | 940 | ||
| DSDLYLNKNN | KNNKDKDSNN | NKKDNKKDNK | KDNEKSLKRN | RK |