Q4PCV8
Gene name |
RNA14 (UMAG_02055) |
Protein name |
mRNA 3'-end-processing protein RNA14 |
Names |
|
Species |
Ustilago maydis (strain 521 / FGSC 9021) (Corn smut fungus) |
KEGG Pathway |
uma:UMAG_02055 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q4PCV8
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q4PCV8-F1 | Predicted | AlphaFoldDB |
No variants for Q4PCV8
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q4PCV8 | |||||
No associated diseases with Q4PCV8
10 regional properties for Q4PCV8
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| repeat | HAT (Half-A-TPR) repeat | 172 - 204 | IPR003107-1 |
| repeat | HAT (Half-A-TPR) repeat | 206 - 238 | IPR003107-2 |
| repeat | HAT (Half-A-TPR) repeat | 240 - 271 | IPR003107-3 |
| repeat | HAT (Half-A-TPR) repeat | 289 - 324 | IPR003107-4 |
| repeat | HAT (Half-A-TPR) repeat | 335 - 368 | IPR003107-5 |
| repeat | HAT (Half-A-TPR) repeat | 420 - 448 | IPR003107-6 |
| repeat | HAT (Half-A-TPR) repeat | 458 - 490 | IPR003107-7 |
| repeat | HAT (Half-A-TPR) repeat | 672 - 704 | IPR003107-8 |
| repeat | HAT (Half-A-TPR) repeat | 706 - 740 | IPR003107-9 |
| domain | Suppressor of forked | 624 - 924 | IPR008847 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| mRNA binding | Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| mRNA 3'-end processing | Any process involved in forming the mature 3' end of an mRNA molecule. |
| RNA 3'-end processing | Any process involved in forming the mature 3' end of an RNA molecule. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSAEASEAHE | AQVKMEVSAD | QESEIAAVQQ | IASVGVSADA | DADADADADA | DADADADADA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| DADADADADL | DADADADADA | DADADAEADV | DHDDKPDAEG | DVEVQTDSIA | ADVKAASENE |
| 130 | 140 | 150 | 160 | 170 | 180 |
| PAQSANAKMD | ESQATPQPMA | ESKLDDHQQQ | DSQLVSPQAG | SSNQPPQPHK | YMTVEQRKQL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| FEERIRIDPR | DGEAWLNLIE | EAQSREDMAA | TRALYDRFFK | VFPNQARQWL | AYLDLELAHS |
| 250 | 260 | 270 | 280 | 290 | 300 |
| NFAQVEAIFN | QCLRTTPSVD | LWKFYLSYTR | RVNPLAPSTG | AEEDPAREQT | RRVLEGAYEF |
| 310 | 320 | 330 | 340 | 350 | 360 |
| ALRFIGNDKD | SGSIWTDYIL | LIKEREARGG | WKEGQKMDDL | RRVYQRAVSV | PLTNIETIWK |
| 370 | 380 | 390 | 400 | 410 | 420 |
| DYDAYENGLN | KLTAKKFLAE | RSPAYMTARR | VLRDLKAYSD | PLVKPLLPRV | PVWTTSALAG |
| 430 | 440 | 450 | 460 | 470 | 480 |
| DAAQDPAQWQ | RERQQADAWI | EYLKWEESNP | LLLEDVAILQ | ARVTSAYRRA | TMYLRFYPEV |
| 490 | 500 | 510 | 520 | 530 | 540 |
| WYLASRYLVS | ILRVDEAATW | LKNGMEACPG | SFLLHFAYAE | LGEARKSTSD | CAAVFDGLLD |
| 550 | 560 | 570 | 580 | 590 | 600 |
| HVHAQIDARQ | AKLQQDLKTV | DLEADRTKAQ | AATRRANEGD | GDVDVDGEER | ERERKAGELL |
| 610 | 620 | 630 | 640 | 650 | 660 |
| QIRKQELQAA | AKPEIEGLKE | ASALVWIKYM | HFLRRTEGIR | PARSVFSRAR | KSPHCTWQVF |
| 670 | 680 | 690 | 700 | 710 | 720 |
| EASALMEYHC | SKDAVVATKV | FELALKTFGS | DEAFVVRYLD | FLISMNDDSN | ARALFERVIG |
| 730 | 740 | 750 | 760 | 770 | 780 |
| TFAPERARPI | WERWAKYEYN | FGDSVAIQKL | ESRLAETYPD | EPATKRFIAR | SSYMDLDLVG |
| 790 | 800 | 810 | 820 | 830 | 840 |
| PRDLGIRAAM | AGASAADRAV | EAAKDGGAEE | GPRRKTMQEM | KRLAAESAQD | DTSGDWARPG |
| 850 | 860 | 870 | 880 | 890 | 900 |
| ASSSAGGAGG | PPVKKFKRDS | ASPAPAAFNN | QAVGQQVAGP | RDAWNEFPES | VLVFMEMLPS |
| 910 | 920 | 930 | 940 | ||
| AQLFDGPMFK | PEDIIDCIRS | ANVPVGGGAR | RGAAGYGGAG | RGRYR |