Q4KLU2
Gene name |
prpf39 |
Protein name |
Pre-mRNA-processing factor 39 |
Names |
PRP39 homolog |
Species |
Xenopus laevis (African clawed frog) |
KEGG Pathway |
xla:734636 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q4KLU2
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q4KLU2-F1 | Predicted | AlphaFoldDB |
No variants for Q4KLU2
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q4KLU2 | |||||
No associated diseases with Q4KLU2
6 regional properties for Q4KLU2
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| repeat | HAT (Half-A-TPR) repeat | 84 - 116 | IPR003107-1 |
| repeat | HAT (Half-A-TPR) repeat | 118 - 150 | IPR003107-2 |
| repeat | HAT (Half-A-TPR) repeat | 158 - 193 | IPR003107-3 |
| repeat | HAT (Half-A-TPR) repeat | 338 - 370 | IPR003107-4 |
| repeat | HAT (Half-A-TPR) repeat | 371 - 404 | IPR003107-5 |
| repeat | HAT (Half-A-TPR) repeat | 478 - 510 | IPR003107-6 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| mRNA processing | Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. |
| RNA splicing | The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MEKSPEHCAE | GSPSPATESA | PSATEPPLPS | TEPPLPSTEP | PLPSTEPPLP | PLPPDFEKYW |
| 70 | 80 | 90 | 100 | 110 | 120 |
| KSVQAYPEDF | NTWTYLLQYV | EQENHLFAAR | KAFDAFLAHY | PYCYGYWKKY | ADLEKKNNNI |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LEADEVYRRG | IQAITLSVDL | WMHYLNFLKE | TLDPADPETS | LTLRGTFEHA | VVSAGLDFRS |
| 190 | 200 | 210 | 220 | 230 | 240 |
| DKLWEMYINW | ETEQGNLSGV | TSIYSRLLGI | PTQFYSLHFQ | RFKEHIQGHL | PREFLTSEKF |
| 250 | 260 | 270 | 280 | 290 | 300 |
| IELRKELASM | TLHGGTNDDI | PSGLEEIKDP | AKRTTEVENM | RHRIIEVHQE | IFNLNEHEVS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| KIWNFEEEIK | RPYFHVKPLE | KAQLNNWKEY | LEFELENGSN | ERIVILFERC | VIACACYEEF |
| 370 | 380 | 390 | 400 | 410 | 420 |
| WIKYAKYMEN | HSVEGVRHVY | NRACHVHLAK | KPMVHLLWAA | FEEQQGNLEE | ARRILKNIET |
| 430 | 440 | 450 | 460 | 470 | 480 |
| AIEGLAMVRL | RRVNLERRHG | NVKEAEHLLE | EAMNKTKTSS | ESSFYAIKLA | RHLFKVQANV |
| 490 | 500 | 510 | 520 | 530 | 540 |
| VKARKVLSNA | IQKDKENTKL | YLNLLEMEYN | CDIKQNEENI | LAAFDKAIKS | PMSIAMRVKF |
| 550 | 560 | 570 | 580 | 590 | 600 |
| SQRKVEFLED | FGSDVNKLLD | TYNEHQKLLK | HQDIVKRKAE | NGLEQPEAKR | LHAEEVSTAA |
| 610 | 620 | 630 | 640 | ||
| SVPVTTASMD | ATQSGYNYGS | WYQYNYPANW | NFGQYYNTPS | T |