Q4K8K9

PR
Gene name
mnmC
Protein name
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC
Names
tRNA mnm(5)s(2)U biosynthesis bifunctional protein
Species
Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
KEGG Pathway
pfl:PFL_4332
EC number
2.1.1.61: Methyltransferases
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

1-56 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q4K8K9

Entry ID Method Resolution Chain Position Source
AF-Q4K8K9-F1 Predicted AlphaFoldDB

No variants for Q4K8K9

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q4K8K9

No associated diseases with Q4K8K9

4 regional properties for Q4K8K9

Type Name Position InterPro Accession
domain FAD dependent oxidoreductase 263 - 627 IPR006076
domain MnmC-like methyltransferase 114 - 233 IPR008471
domain tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC, C-terminal 262 - 656 IPR017610
domain tRNA mnm(5)s(2)U biosynthesis bifunctional protein MnmC, N-terminal 19 - 234 IPR047785

Functions

Description
EC Number 2.1.1.61 Methyltransferases
Subcellular Localization
  • Cytoplasm
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

3 GO annotations of molecular function

Name Definition
flavin adenine dinucleotide binding Binding to FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
oxidoreductase activity, acting on the CH-NH group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity Catalysis of the reaction: S-adenosyl-L-methionine + tRNA containing 5-aminomethyl-2-thiouridine = S-adenosyl-L-homocysteine + tRNA containing 5-methylaminomethyl-2-thiouridylate.

1 GO annotations of biological process

Name Definition
tRNA wobble base modification The process in which the nucleotide at position 34 in the anticodon of a tRNA is post-transcriptionally modified.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MIPELPHAQL DWDDQGRPRS RVFDDVYFSS ESGLDETRHV FIEQNRLGQR FAALADGERF
70 80 90 100 110 120
VIGETGFGTG LNFLCAWQLF QQQAPTGARL HFVSVEKYPL SPADLQRALA LWPELASFSA
130 140 150 160 170 180
PLLEQYVAVH GGFQRIVLEG GRVILTLLIG DALEQLPQLD AQVDAWFLDG FAPAKNPDMW
190 200 210 220 230 240
TAELFAELAR LAAPGSTIST FTSTGWVRRL LNSAGFKMKR TPGIGHKWEV LRGEFLGWPE
250 260 270 280 290 300
DAPAPARARP WFARPALGEK TALVIGGGLA GCASAASLAA RGWQVQLLER HAELAREASG
310 320 330 340 350 360
NPQGVLYLKL SAHGTALSQM ILSGFGYTRR QLEHLQRGQD WDGCGVLQLA FNAKEAERQA
370 380 390 400 410 420
QLAAAFPADL LHLLDQPQAQ ARAGIGLEHG GLFYPEGGWV HPPALCQWQA SHPRIQVLAH
430 440 450 460 470 480
REVLELRRVD EQWQAWDGDR MLASAAVVIL AGAAEIKRFP ASADLPLKRI RGQITRLPQT
490 500 510 520 530 540
AQSQSLATVV CAEGYVAPAR LGEHTLGASF DFKSQDLTPT SAEHAGNLEM LREISSDLLQ
550 560 570 580 590 600
RLGAEQLPLD SLQGRAAFRC TSPDYLPIVG PLADPLAFAE TYAALGKDAR QVPDLPCPWL
610 620 630 640 650
DGLYINSGHG SRGLITAPLS GELLAAWLEN EPLPLPRSVA EACHPNRFAL RRLIRGKA