Q49WL3
Gene name |
rnj1 |
Protein name |
Ribonuclease J 1 |
Names |
RNase J1 |
Species |
Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) |
KEGG Pathway |
ssp:SSP1701 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q49WL3
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q49WL3-F1 | Predicted | AlphaFoldDB |
No variants for Q49WL3
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q49WL3 | |||||
No associated diseases with Q49WL3
1 regional properties for Q49WL3
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Ribonuclease H domain | 11 - 152 | IPR002156 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| 5'-3' exoribonuclease activity | Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of an RNA molecule. |
| endoribonuclease activity | Catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
| zinc ion binding | Binding to a zinc ion (Zn). |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| rRNA processing | Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MKQIHKNEVA | VYALGGLGEI | GKNTYAVEYQ | DEIVIIDAGI | KFPDDNLLGI | DYVIPDITYL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| EQNQDKIVGL | FITHGHEDHI | GGVPYLLKQI | NVPIYGGPLA | LGLIRNKLEE | HHLLRTTELI |
| 130 | 140 | 150 | 160 | 170 | 180 |
| EIDESSVIKS | KHFEVSFYLT | THSIPEAYGV | IVNTPEGNIV | HTGDFKFDFT | PVGEPANIAK |
| 190 | 200 | 210 | 220 | 230 | 240 |
| MAKLGEEGVL | CLLSDSTNSL | VPDFTLSERE | VGQNVEKIFR | NCSGRIIFAT | FASNIYRVQQ |
| 250 | 260 | 270 | 280 | 290 | 300 |
| AVEAAIKHNR | KIVTFGRSME | NNIKIGMELG | YIKAPPETFV | EPNKINTVPK | HELLILCTGS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| QGEPMAALSR | IANGTHKQIK | IIPEDTVVFS | SSPIPGNTKS | INRTINSLYR | AGAEVIHNKV |
| 370 | 380 | 390 | 400 | 410 | 420 |
| SNIHTSGHGS | KGDQQLMLRL | LRPKFFLPIH | GEYRMLKAHG | QSGIECGVDP | DNVFIFDIGD |
| 430 | 440 | 450 | 460 | 470 | 480 |
| VLALTHDSAR | KAGRIPSGNV | LVDGSGIGDI | GNVVIRDRKL | LSEEGLVIVV | VSIDFKTNKL |
| 490 | 500 | 510 | 520 | 530 | 540 |
| LSGPDIISRG | FVYMRESGQL | IYDAQRRIKT | DVIGKLNQNQ | DIQWHQIKSS | IIETLQPYLF |
| 550 | 560 | 570 | 580 | 590 | 600 |
| EKTARKPMIL | PVIMKVNEDN | NQTSTKKPSN | KNTKPKKNNT | KSPSKNQQNV | EKSSNKNGSN |
| 610 | |||||
| KANQSVEKPK | QSNQNQNSES |