Q45493
Gene name |
rnjA |
Protein name |
Ribonuclease J1 |
Names |
RNase J1 |
Species |
Bacillus subtilis (strain 168) |
KEGG Pathway |
bsu:BSU14530 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
2 structures for Q45493
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 3ZQ4 | X-ray | 300 A | A/C/D/E | 1-555 | PDB |
| AF-Q45493-F1 | Predicted | AlphaFoldDB |
No variants for Q45493
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q45493 | |||||
No associated diseases with Q45493
1 regional properties for Q45493
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Ribonuclease HII/HIII domain | 101 - 316 | IPR024567 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
5 GO annotations of molecular function
| Name | Definition |
|---|---|
| 5'-3' exoribonuclease activity | Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of an RNA molecule. |
| endoribonuclease activity | Catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks. |
| identical protein binding | Binding to an identical protein or proteins. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
| zinc ion binding | Binding to a zinc ion (Zn). |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| mRNA processing | Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. |
| rRNA processing | Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MKFVKNDQTA | VFALGGLGEI | GKNTYAVQFQ | DEIVLIDAGI | KFPEDELLGI | DYVIPDYTYL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| VKNEDKIKGL | FITHGHEDHI | GGIPYLLRQV | NIPVYGGKLA | IGLLRNKLEE | HGLLRQTKLN |
| 130 | 140 | 150 | 160 | 170 | 180 |
| IIGEDDIVKF | RKTAVSFFRT | THSIPDSYGI | VVKTPPGNIV | HTGDFKFDFT | PVGEPANLTK |
| 190 | 200 | 210 | 220 | 230 | 240 |
| MAEIGKEGVL | CLLSDSTNSE | NPEFTMSERR | VGESIHDIFR | KVDGRIIFAT | FASNIHRLQQ |
| 250 | 260 | 270 | 280 | 290 | 300 |
| VIEAAVQNGR | KVAVFGRSME | SAIEIGQTLG | YINCPKNTFI | EHNEINRMPA | NKVTILCTGS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| QGEPMAALSR | IANGTHRQIS | INPGDTVVFS | SSPIPGNTIS | VSRTINQLYR | AGAEVIHGPL |
| 370 | 380 | 390 | 400 | 410 | 420 |
| NDIHTSGHGG | QEEQKLMLRL | IKPKFFMPIH | GEYRMQKMHV | KLATDCGIPE | ENCFIMDNGE |
| 430 | 440 | 450 | 460 | 470 | 480 |
| VLALKGDEAS | VAGKIPSGSV | YIDGSGIGDI | GNIVLRDRRI | LSEEGLVIVV | VSIDMDDFKI |
| 490 | 500 | 510 | 520 | 530 | 540 |
| SAGPDLISRG | FVYMRESGDL | INDAQELISN | HLQKVMERKT | TQWSEIKNEI | TDTLAPFLYE |
| 550 | |||||
| KTKRRPMILP | IIMEV |