Q40424
Gene name |
LCY1 (LYC) |
Protein name |
Lycopene beta cyclase, chloroplastic/chromoplastic |
Names |
|
Species |
Narcissus pseudonarcissus (Daffodil) |
KEGG Pathway |
|
EC number |
5.5.1.19: Intramolecular lyases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q40424
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q40424-F1 | Predicted | AlphaFoldDB |
No variants for Q40424
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q40424 | |||||
No associated diseases with Q40424
No regional properties for Q40424
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q40424 | |||
Functions
| Description | ||
|---|---|---|
| EC Number | 5.5.1.19 | Intramolecular lyases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| chloroplast membrane | Either of the lipid bilayers that surround a chloroplast and form the chloroplast envelope. |
| chromoplast membrane | Either of the lipid bilayers that surround a chromoplast and form the chromoplast envelope. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| isomerase activity | Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5. |
| oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| carotenoid biosynthetic process | The chemical reactions and pathways resulting in the formation of carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDTLLRTHNR | LELLYPLHEL | AKRHFLSPSP | NPQNPNFKFF | SRKPYQKKCR | NGYIGVSSNQ |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LLDLVPEIKK | EHLEFDLPLY | DPSKALTLDL | AVVGGGPLAR | SCSTSLGGGL | SVVSIDPNPK |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LIWPNNYGVW | VDEFEDMDLL | DCLDATWSGA | IVYVDDRSTK | NLSRPYARVN | RKNLKSKMMK |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KCVSNGVRFH | QATVVKAMHE | EEKSYLICSD | GVTIDARVVL | DATGFSRCLV | QYDKPYNPGY |
| 250 | 260 | 270 | 280 | 290 | 300 |
| QVAYGILAEV | EEHPFDVDKM | VFMDWRDSHL | NGKAELNERN | AKIPTFLYAM | PFSSNRIFLE |
| 310 | 320 | 330 | 340 | 350 | 360 |
| ETSLVARPGL | KMEDIQERMV | ARLNHLGIRI | KSIEEDERCV | IPMGGPLPVI | PQRVVGIGGT |
| 370 | 380 | 390 | 400 | 410 | 420 |
| AGMVHPSTGY | MVARTLAAAP | IVANSIVQYL | VSDSGLSGND | LSADVWKDLW | PIERRRQREF |
| 430 | 440 | 450 | 460 | 470 | 480 |
| FCFGMDILLK | LDLEGTRRFF | DAFFDLEPRY | WHGFLSSRLF | LPELVPFGLS | LFSHASNTCK |
| 490 | 500 | ||||
| LEIMAKGTLP | LVNMINNLVQ | DRD |