Q3KSM3

PR
Gene name
Protein name
RNA-directed RNA polymerase
Names
RdRp, RNA replicase
Species
Pieris rapae virus
KEGG Pathway
EC number
2.7.7.48: Nucleotidyltransferases
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

405-488 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

0 structures for Q3KSM3

Entry ID Method Resolution Chain Position Source

No variants for Q3KSM3

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q3KSM3

No associated diseases with Q3KSM3

6 regional properties for Q3KSM3

Type Name Position InterPro Accession
conserved_site ATP-dependent RNA helicase DEAD-box, conserved site 141 - 149 IPR000629
domain EF-hand domain 24 - 95 IPR002048-1
domain EF-hand domain 97 - 168 IPR002048-2
binding_site EF-Hand 1, calcium-binding site 37 - 49 IPR018247-1
binding_site EF-Hand 1, calcium-binding site 73 - 85 IPR018247-2
binding_site EF-Hand 1, calcium-binding site 146 - 158 IPR018247-3

Functions

Description
EC Number 2.7.7.48 Nucleotidyltransferases
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

No GO annotations of cellular component

Name Definition
No GO annotations for cellular component

2 GO annotations of molecular function

Name Definition
RNA binding Binding to an RNA molecule or a portion thereof.
RNA-directed 5'-3' RNA polymerase activity Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1); uses an RNA template, i.e. the catalysis of RNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time.

2 GO annotations of biological process

Name Definition
DNA-templated transcription The synthesis of an RNA transcript from a DNA template.
viral RNA genome replication The replication of a viral RNA genome.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MSSVIKTIVV KTLQCTVKCV CVGVRQQYGL LRRHPKTIAC ALVGGIIAHD VLHLYAAVYR
70 80 90 100 110 120
VENPWEFVPT EGPRGVIVLR VYNALRFTAA KWRWNCWTIF GKFPFNSEQF SRIMETSTER
130 140 150 160 170 180
KPDLRPLLVP AHETIEVYPC NNIHSHPRSA EFRSSANEYL VRSVRRAGYP PYVVSSSKRD
190 200 210 220 230 240
FCDGNRFFYC PKDFGMQFRN DPISNNHALV FTDVDYYANM NRWLQLFLPT CLYTLVPTRL
250 260 270 280 290 300
NYSNDEFAYR FENNEIVYNV TGGGEYRHSL WDYKGDTVTV VDEYGNLLIF DIEQRRVQGD
310 320 330 340 350 360
EQHRLIWLLP KAKITDPLWI VGPTEWYDKL LVRKTVQQGR LKILWEPIAD DLSIGLHGSN
370 380 390 400 410 420
YSVSLKGELF EAIRTRISCK DSTPYVSDVE RMLREAKHKN FLTDAPILYH CFQDDVIIRP
430 440 450 460 470 480
NVVKTGSFPV TYNAIPKKAP SVTEDPKMPG QVVTTPLVSQ PALFAGKGFN ADKACIEGRI
490 500 510 520 530 540
EKVRNVTKFP IKYVRYAAEF VKLVIPETIA GTGVPNSIGM IREEQDKVAQ RARFDRVAPI
550 560 570 580 590 600
MSTQTENSIK AFIKTEMYAA AKAPRNISTM APEITIQSSA YSLPMAKIFK KIPWYCPGKN
610 620 630 640 650 660
PKEITLRLAE VCLQDPDHEL EEGDYTCMDG TQSPDYSDLL LLPIYMRYFA KQYRGQFKNL
670 680 690 700 710 720
YNQIYKQRAT TSSGVPYNPE MTIRSGSSIT THAGTLNNAF NIYAALRDMG YDETTAWDKV
730 740 750 760 770 780
GAVFGDDSLN ANHQGEFHSY IEHVTKVLGM RYKSNLRERG QPVLFLGRYF VDPITSYDSF
790 800 810 820 830 840
ADPMRTIGKL HATANKNVSV EQGAANKAHG YITTDSKTPI IGAWARRVLE ITKKKFKNGT
850 860 870 880 890 900
GEEQYRCSNA WPQKDEAAIR AAMAAVLEVD EAQLIAQNEA VLKVNSLDQF PVVFDTYYDH
910 920 930 940 950 960
KQLAEVDGQL VGTDLHIKEE DERQPETSID SVPSTGPPPS NGDPNAGGKP TDGPSKGKRK
970 980 990 1000 1010
VKGRRPRTAG DPATLRLTDA GSSRRVKPPR KLRPEAKRGG RPIETLVFKN SSLS