Q2Y5S4
Gene name |
ubiD |
Protein name |
3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
Names |
Polyprenyl p-hydroxybenzoate decarboxylase |
Species |
Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849 / C 71) |
KEGG Pathway |
nmu:Nmul_A2610 |
EC number |
4.1.1.98: Carboxy-lyases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q2Y5S4
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q2Y5S4-F1 | Predicted | AlphaFoldDB |
No variants for Q2Y5S4
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q2Y5S4 | |||||
No associated diseases with Q2Y5S4
7 regional properties for Q2Y5S4
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| active_site | Cysteine peptidase, cysteine active site | 91 - 102 | IPR000169 |
| domain | Peptidase C2, calpain, catalytic domain | 24 - 345 | IPR001300 |
| domain | EF-hand domain | 565 - 626 | IPR002048 |
| binding_site | EF-Hand 1, calcium-binding site | 604 - 616 | IPR018247 |
| domain | Peptidase C2, calpain, large subunit, domain III | 354 - 486 | IPR022682 |
| domain | Peptidase C2, calpain, domain III | 348 - 494 | IPR022683 |
| domain | Calpain subdomain III | 347 - 496 | IPR033883 |
Functions
| Description | ||
|---|---|---|
| EC Number | 4.1.1.98 | Carboxy-lyases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity | Catalysis of the reaction: 3-octaprenyl-4-hydroxy benzoate = 2-octaprenylphenol + CO2. |
| metal ion binding | Binding to a metal ion. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| ubiquinone biosynthetic process | The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MKYKDLRDFL | AQLERQGELK | RVAVEIDPHL | EMTEICDRLL | KAGGPAVLFE | KSRGHDIPVL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| GNLFGTPKRV | AMGMGQDSVE | ALREVGKLLA | YLKEPDPPKG | LKDAWEKLPV | LKQVLNMAPK |
| 130 | 140 | 150 | 160 | 170 | 180 |
| ELSRASCQEI | VWEGKDVDLG | KLPIQTCWPG | DAGPLITWGL | TVTKGPHKTR | QNLGIYRQQV |
| 190 | 200 | 210 | 220 | 230 | 240 |
| IAPNKVIMRW | LAHRGGALDF | RDFTLANPGQ | PYPIAVALGA | DPATILGAVT | PVPDSLSEYQ |
| 250 | 260 | 270 | 280 | 290 | 300 |
| FAGLLRGAKT | EIVKCLTHDL | QVPASAEIVL | EGYIHPDETA | VEGPFGDHTG | YYNEQETFPV |
| 310 | 320 | 330 | 340 | 350 | 360 |
| FTIERITMRR | DPIYHSTYTG | KPPDEPAILG | VALNEVFVPL | LQKQFTEIVD | FYLPPEGCSY |
| 370 | 380 | 390 | 400 | 410 | 420 |
| RMAVVSMKKQ | YAGHAKRIMF | GVWSFLRQFM | YTKFIIVTDD | DVNIRDWKEV | IWAITTRVDP |
| 430 | 440 | 450 | 460 | 470 | 480 |
| ARDTLIVENT | PIDYLDFASP | VSGLGGKMGL | DATNKWPGET | SREWGKPITM | DEVVKARVDG |
| MWTDLDL |