Q2RNB6
Gene name |
psd |
Protein name |
Phosphatidylserine decarboxylase proenzyme |
Names |
|
Species |
Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) |
KEGG Pathway |
rru:Rru_A3585 |
EC number |
4.1.1.65: Carboxy-lyases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q2RNB6
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q2RNB6-F1 | Predicted | AlphaFoldDB |
No variants for Q2RNB6
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q2RNB6 | |||||
No associated diseases with Q2RNB6
3 regional properties for Q2RNB6
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | DNA ligase, ATP-dependent, central | 126 - 348 | IPR012310 |
| conserved_site | DNA ligase, ATP-dependent, conserved site | 149 - 157 | IPR016059-1 |
| conserved_site | DNA ligase, ATP-dependent, conserved site | 291 - 318 | IPR016059-2 |
Functions
| Description | ||
|---|---|---|
| EC Number | 4.1.1.65 | Carboxy-lyases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| phosphatidylserine decarboxylase activity | Catalysis of the reaction: H(+) + phosphatidyl-L-serine = CO(2) + phosphatidylethanolamine. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| phosphatidylethanolamine biosynthetic process | The chemical reactions and pathways resulting in the formation of phosphatidylethanolamine, any of a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MRRFDIGWKT | YLLPEIHPEG | WRFISIFAAV | TFGLWLWQDW | LVVPGLVLTI | WCVYFFRNPK |
| 70 | 80 | 90 | 100 | 110 | 120 |
| RTVPDRLGLV | VTPASGIVQM | VGLVDPPAEL | ALDPPGPRQR | ISVFMSVFDC | HVNRCPVGGT |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VRKIVYAPGK | FVNATLDKAS | ADNERNSVVL | DIGQSRDLAF | VQIAGLVARR | IRCDLVEGQS |
| 190 | 200 | 210 | 220 | 230 | |
| VLTGEIMGLI | RFGSRLDIYL | PPGAAPLVAP | GQSCISGETV | LADLASAEPE | RLGVLR |