Q2N9K0

PR
Gene name
smpB
Protein name
SsrA-binding protein
Names
Small protein B
Species
Erythrobacter litoralis (strain HTCC2594)
KEGG Pathway
eli:ELI_07745
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

1-48 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q2N9K0

Entry ID Method Resolution Chain Position Source
AF-Q2N9K0-F1 Predicted AlphaFoldDB

No variants for Q2N9K0

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q2N9K0

No associated diseases with Q2N9K0

7 regional properties for Q2N9K0

Type Name Position InterPro Accession
domain Signal transduction response regulator, receiver domain 612 - 730 IPR001789
domain GAF domain 157 - 315 IPR003018
domain Histidine kinase/HSP90-like ATPase 453 - 585 IPR003594
domain Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 340 - 406 IPR003661
domain Signal transduction histidine kinase-related protein, C-terminal 509 - 523 IPR004358-1
domain Signal transduction histidine kinase-related protein, C-terminal 544 - 562 IPR004358-2
domain Histidine kinase domain 348 - 585 IPR005467

Functions

Description
EC Number
Subcellular Localization
  • Cytoplasm
  • The tmRNA-SmpB complex associates with stalled 70S ribosomes
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

1 GO annotations of molecular function

Name Definition
RNA binding Binding to an RNA molecule or a portion thereof.

1 GO annotations of biological process

Name Definition
trans-translation A translational elongation process in which transfer of a translating ribosome from one mRNA to another RNA template takes place. Trans-translation occurs during tmRNA release of stalled ribosomes.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MARPKPETFD KQKTVAENRR ARFDYAVEDK FEAGIALQGT EVKALRAGEA SIAESYAEVR
70 80 90 100 110 120
DGEAWLINAN IPEYSHGNRL NHQPRRPRKL LLHNREIERL LGAVERKGMT LVPLSIYFNS
130 140 150
RGRAKVELAL AKGRQAQDKR EYIKDRDWKR DKARIMRDKG