Q2KZZ3
Gene name |
prfA |
Protein name |
Peptide chain release factor 1 |
Names |
RF-1 |
Species |
Bordetella avium (strain 197N) |
KEGG Pathway |
bav:BAV0297 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q2KZZ3
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q2KZZ3-F1 | Predicted | AlphaFoldDB |
No variants for Q2KZZ3
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q2KZZ3 | |||||
No associated diseases with Q2KZZ3
4 regional properties for Q2KZZ3
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | NADH-quinone oxidoreductase, subunit D | 329 - 600 | IPR001135 |
| domain | NADH:ubiquinone oxidoreductase, 30kDa subunit | 50 - 177 | IPR001268 |
| conserved_site | NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site | 252 - 263 | IPR014029 |
| conserved_site | NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site | 138 - 159 | IPR020396 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| translation release factor activity, codon specific | A translation release factor that is specific for one or more particular termination codons; acts at the ribosomal A-site and require polypeptidyl-tRNA at the P-site. |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MKSSMLGRLE | QLAHRLIEVD | ALLADPDSAG | DMDRFRRLSR | ERAELEPVVL | AFNAFQSTQA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| DLATAQEMLA | DPEMKAMAEE | EIKAARERIE | VLEGELQVLL | LPRDPNDGRS | LFLEIRAGTG |
| 130 | 140 | 150 | 160 | 170 | 180 |
| GDESALFSGD | LLRMYSRYAE | SQGWRVEIMS | ESPSELGGYK | EVIARIDGDG | AYGRLKFESG |
| 190 | 200 | 210 | 220 | 230 | 240 |
| AHRVQRVPAT | EAQGRIHTSA | CTVAVMPEAD | EMNDIVINPA | DLRIDTFRAS | GAGGQHINKT |
| 250 | 260 | 270 | 280 | 290 | 300 |
| DSAVRITHLP | TGLVVECQDD | RSQHRNKDRA | MQVLAARLKD | KELRERQSKE | AAERKSLVGS |
| 310 | 320 | 330 | 340 | 350 | |
| GDRSERIRTY | NYPQGRVTDH | RINLTLYKLQ | QILEGDLNEL | TGALLAEHQA | EQLAALGEDI |